Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 1.3e-88 329.7 171 100.0
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 3.4e-52 208.8 168 67.9
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 6.0e-49 198.0 177 65.0
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 4.0e-45 185.3 132 76.5
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 5.8e-44 181.4 172 57.6
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 8.4e-43 177.6 170 60.6
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 8.4e-43 177.6 152 61.8
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 1.9e-42 176.4 105 81.9
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 3.2e-42 175.6 100 87.0
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 9.3e-42 174.1 99 87.9
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 2.1e-41 172.9 172 57.6
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 2.1e-41 172.9 177 57.6
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 2.7e-41 172.6 149 65.8
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 1.3e-40 170.2 136 68.4
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 1.3e-40 170.2 161 59.6
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 2.3e-40 169.5 105 77.1
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 3.9e-40 168.7 144 61.1
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 5.1e-40 168.3 116 74.1
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 5.1e-40 168.3 114 75.4
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 6.6e-40 167.9 143 61.5
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 8.7e-40 167.5 115 74.8
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 8.7e-40 167.5 118 73.7
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 8.7e-40 167.5 158 60.1
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 1.5e-39 166.8 171 58.5
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 1.5e-39 166.8 118 72.0
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 1.9e-39 166.4 112 75.9
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 2.5e-39 166.0 175 54.9
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 4.3e-39 165.2 181 53.0
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 4.3e-39 165.2 122 69.7
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 5.6e-39 164.9 100 79.0
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 5.6e-39 164.9 157 59.2
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 9.6e-39 164.1 117 72.6
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 9.6e-39 164.1 116 72.4
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 1.3e-38 163.7 92 82.6
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 1.3e-38 163.7 116 72.4
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 1.3e-38 163.7 99 76.8
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 1.6e-38 163.3 116 70.7
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 1.6e-38 163.3 116 70.7
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 1.6e-38 163.3 116 72.4
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 1.6e-38 163.3 122 71.3
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 2.1e-38 162.9 167 55.7
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 2.8e-38 162.5 132 65.2
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 2.8e-38 162.5 162 56.8
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 3.6e-38 162.2 130 64.6
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 3.6e-38 162.2 130 64.6
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 4.8e-38 161.8 130 64.6
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 4.8e-38 161.8 117 70.1
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 8.1e-38 161.0 93 82.8
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 8.1e-38 161.0 93 82.8
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 8.1e-38 161.0 161 57.1
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 8.1e-38 161.0 167 55.1
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 8.1e-38 161.0 141 58.9
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 8.1e-38 161.0 114 71.1
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 1.1e-37 160.6 111 75.7
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.1e-37 160.6 117 70.1
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 1.1e-37 160.6 92 80.4
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 1.8e-37 159.8 116 69.8
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 1.8e-37 159.8 162 58.0
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 3.1e-37 159.1 169 55.0
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 4.0e-37 158.7 170 52.9
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 9.0e-37 157.5 123 65.9
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 9.0e-37 157.5 116 69.8
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 1.2e-36 157.1 92 79.3
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 1.2e-36 157.1 115 70.4
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 1.5e-36 156.8 116 67.2
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.5e-36 156.8 169 54.4
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 2.0e-36 156.4 120 68.3
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 2.0e-36 156.4 164 54.3
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 2.6e-36 156.0 119 68.9
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 2.6e-36 156.0 119 68.9
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 2.6e-36 156.0 126 65.9
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 2.6e-36 156.0 161 58.4
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 9.9e-36 154.1 160 55.0
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 8.4e-35 151.0 151 54.3
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 5.4e-34 148.3 143 55.9
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 7.1e-34 147.9 165 52.1
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 1.2e-33 147.1 177 50.8
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 2.1e-33 146.4 105 69.5
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 2.1e-33 146.4 122 64.8
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 2.1e-33 146.4 116 69.0
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 6.0e-33 144.8 98 68.4
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 7.8e-33 144.4 127 60.6
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 1.0e-32 144.1 110 61.8
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 5.6e-31 138.3 135 57.0
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 2.1e-30 136.3 78 84.6
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 6.2e-30 134.8 138 53.6
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 6.9e-29 131.3 71 85.9
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 1.2e-28 130.6 156 48.1
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 7.6e-28 127.9 96 62.5
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 9.3e-26 120.9 123 55.3
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 1.6e-25 120.2 160 49.4
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 2.1e-25 119.8 129 51.9
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 6.7e-24 114.8 75 76.0
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 8.7e-24 114.4 62 88.7
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 8.7e-24 114.4 63 84.1
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 7.4e-23 111.3 61 85.2
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 2.4e-21 106.3 131 50.4
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 9.0e-21 104.4 74 66.2
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 2.1e-17 93.2 69 63.8
Thecc.04G214500 Theobroma cacao HOM05D007635 ORTHO05D009612 1.9e-07 60.1 39 76.9
Gohir.A10G120700 Gossypium hirsutum HOM05D007635 ORTHO05D009612 3.3e-07 59.3 76 50.0
Gohir.D10G145600 Gossypium hirsutum HOM05D007635 ORTHO05D009612 2.2e-06 56.6 76 48.7


User provided reference genes

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