Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p036848 Quercus lobata HOM05D009231 ORTHO05D010800 2.0e-127 459.1 240 100.0
Haze_07057 Corylus avellana HOM05D009231 ORTHO05D010800 8.7e-54 214.5 273 50.2
Cfa021528 Carpinus fangiana HOM05D009231 ORTHO05D010800 2.8e-52 209.5 257 51.0
CiPaw.09G020600 Carya illinoinensis HOM05D007097 ORTHO05D008131 2.5e-45 186.4 272 46.3
Manes.08G032900 Manihot esculenta HOM05D009231 ORTHO05D010800 1.5e-37 160.6 259 45.2
Duzib093G0513 Durio zibethinus HOM05D009231 ORTHO05D010800 2.1e-36 156.8 266 42.1
Manes.09G044800 Manihot esculenta HOM05D009231 ORTHO05D010800 8.2e-36 154.8 262 44.7
Thecc.05G103300 Theobroma cacao HOM05D009231 ORTHO05D010800 5.5e-32 142.1 263 39.9
Gorai.002G235600 Gossypium raimondii HOM05D009231 ORTHO05D010800 3.9e-30 136.0 255 41.2
Gohir.A01G201800 Gossypium hirsutum HOM05D009231 ORTHO05D010800 5.1e-30 135.6 248 37.5
GSVIVG01033951001 Vitis vinifera HOM05D009231 ORTHO05D010800 2.5e-29 133.3 271 42.1
TAR636G0160 Trochodendron aralioides HOM05D009231 ORTHO05D010800 8.2e-28 128.3 259 39.0
Prupe.7G095600 Prunus persica HOM05D015804 ORTHO05D010800 2.0e-26 123.6 258 39.1
TAR633G1440 Trochodendron aralioides HOM05D009231 ORTHO05D010800 1.0e-25 121.3 290 35.5
Actinidia03894 Actinidia chinensis HOM05D009231 ORTHO05D010800 1.1e-24 117.9 263 36.1
Cpa.g.sc104.38 Carica papaya HOM05D009231 ORTHO05D010800 1.1e-24 117.9 287 34.5
Actinidia32045 Actinidia chinensis HOM05D009231 ORTHO05D010800 4.2e-24 115.9 268 35.8
Hma1.2p1_0079F.1_g041880 Hydrangea macrophylla HOM05D009231 ORTHO05D010800 7.9e-23 111.7 265 36.2
RcHm_v2.0_Chr3g0475841 Rosa chinensis HOM05D015804 ORTHO05D010800 7.9e-23 111.7 257 35.8
Potri.006G203800 Populus trichocarpa HOM05D009231 ORTHO05D010800 7.4e-21 105.1 251 37.8
Gohir.D01G191700 Gossypium hirsutum HOM05D009231 ORTHO05D010800 1.1e-19 101.3 215 39.1
Nn6g34706 Nelumbo nucifera HOM05D009231 ORTHO05D010800 5.3e-19 99.0 230 35.7
PGR142G1154 Punica granatum HOM05D009231 ORTHO05D010800 2.6e-18 96.7 269 31.6
Nn2g14291 Nelumbo nucifera HOM05D009231 ORTHO05D010800 6.5e-17 92.0 218 35.8
FvH4_6g20250 Fragaria vesca HOM05D015804 ORTHO05D010800 5.5e-16 89.0 256 32.4
FAN14G2856 Fragaria x ananassa HOM05D015804 ORTHO05D010800 1.6e-15 87.4 257 33.1
Dinv31754 Davidia involucrata HOM05D009231 ORTHO05D010800 3.6e-15 86.3 181 37.0
MD12G1039600 Malus domestica HOM05D015804 ORTHO05D010800 6.1e-15 85.5 198 35.4
COL.COLO4_29583 Corchorus olitorius HOM05D009231 ORTHO05D010800 2.3e-14 83.6 168 41.1
FAN05G3991 Fragaria x ananassa HOM05D015804 ORTHO05D010800 2.2e-12 77.0 259 29.7
Aqoxy1G00673 Aquilegia oxysepala HOM05D009231 ORTHO05D010800 6.3e-12 75.5 280 28.2
FAN02G3496 Fragaria x ananassa HOM05D015804 ORTHO05D010800 4.5e-10 69.3 247 28.7
FAN05G1852 Fragaria x ananassa HOM05D015804 ORTHO05D010800 5.9e-10 68.9 249 28.5
CDE08G0923 Ceratophyllum demersum HOM05D009231 ORTHO05D010800 2.9e-09 66.6 255 26.7
Duzib106G2060 Durio zibethinus HOM05D009231 ORTHO05D010800 1.9e-08 63.9 87 42.5
FAN09G0232 Fragaria x ananassa HOM05D015804 ORTHO05D010800 3.2e-08 63.2 244 27.5
Nitab4.5_0002958g0010 Nicotiana tabacum HOM05D019826 ORTHO05D022411 3.2e-08 63.2 252 30.6
Hund03818 Selenicereus undatus HOM05D009231 ORTHO05D010800 3.6e-07 59.7 266 25.6
ATR0772G209 Amborella trichopoda HOM05D009231 ORTHO05D010800 6.1e-07 58.9 256 27.0
HPP92_023078 Vanilla planifolia HOM05D009231 ORTHO05D010800 1.0e-06 58.2 256 26.6


User provided reference genes

Program Settings