Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p036221 Quercus lobata HOM05D005357 ORTHO05D006354 9.9e-286 986.1 498 100.0
CiPaw.09G205000 Carya illinoinensis HOM05D005357 ORTHO05D006354 3.1e-239 831.6 499 84.0
Cfa017262 Carpinus fangiana HOM05D005357 ORTHO05D006354 2.2e-237 825.5 500 84.2
Haze_20938 Corylus avellana HOM05D005357 ORTHO05D006354 5.7e-225 784.3 500 82.0
Thecc.05G023500 Theobroma cacao HOM05D005357 ORTHO05D006354 1.0e-186 657.1 502 70.1
CANSAT35G1827 Cannabis sativa HOM05D005357 ORTHO05D006354 6.4e-184 647.9 499 69.5
Duzib093G0024 Durio zibethinus HOM05D005357 ORTHO05D006354 2.4e-183 646.0 502 69.5
COL.COLO4_14619 Corchorus olitorius HOM05D005357 ORTHO05D006354 4.1e-183 645.2 502 69.1
TAR633G0560 Trochodendron aralioides HOM05D005357 ORTHO05D006354 2.5e-180 636.0 521 67.9
Gohir.A09G163000 Gossypium hirsutum HOM05D005357 ORTHO05D006354 5.6e-180 634.8 502 68.9
TWI77G0073 Tripterygium wilfordii HOM05D005357 ORTHO05D006354 7.3e-180 634.4 498 67.9
Ciclev10011563m.g Citrus clementina HOM05D005357 ORTHO05D006354 3.1e-178 629.0 506 67.6
Prupe.6G269500 Prunus persica HOM05D005357 ORTHO05D006354 3.4e-177 625.5 483 68.3
Nitab4.5_0006254g0010 Nicotiana tabacum HOM05D005357 ORTHO05D006354 1.4e-175 620.2 507 65.9
Dinv37091 Davidia involucrata HOM05D005357 ORTHO05D006354 5.4e-175 618.2 503 69.2
MD12G1159000 Malus domestica HOM05D005357 ORTHO05D006354 5.4e-175 618.2 481 69.6
Duzib128G1243 Durio zibethinus HOM05D005357 ORTHO05D006354 1.6e-174 616.7 501 65.7
MD04G1145200 Malus domestica HOM05D005357 ORTHO05D006354 1.0e-173 614.0 470 69.6
Gohir.D09G158500 Gossypium hirsutum HOM05D005357 ORTHO05D006354 9.5e-172 607.4 502 65.5
Manes.08G086900 Manihot esculenta HOM05D005357 ORTHO05D006354 2.1e-171 606.3 505 68.9
Duzib106G1773 Durio zibethinus HOM05D005357 ORTHO05D006354 3.6e-171 605.5 502 66.3
Gorai.006G180200 Gossypium raimondii HOM05D005357 ORTHO05D006354 5.2e-170 601.7 502 66.3
TAR636G3085 Trochodendron aralioides HOM05D005357 ORTHO05D006354 5.2e-170 601.7 468 68.2
Nn1g02852 Nelumbo nucifera HOM05D005357 ORTHO05D006354 1.2e-169 600.5 520 66.0
Potri.006G095600 Populus trichocarpa HOM05D005357 ORTHO05D006354 7.6e-169 597.8 512 66.8
Hma1.2p1_0703F.1_g206335 Hydrangea macrophylla HOM05D005357 ORTHO05D006354 1.3e-168 597.0 504 65.1
Cpa.g.sc312.3 Carica papaya HOM05D005357 ORTHO05D006354 6.4e-168 594.7 501 67.3
Peaxi162Scf00141g00133 Petunia axillaris HOM05D005357 ORTHO05D006354 8.4e-168 594.3 504 63.9
RcHm_v2.0_Chr3g0463991 Rosa chinensis HOM05D005357 ORTHO05D006354 1.1e-167 594.0 485 66.8
ClCG10G021740 Citrullus lanatus HOM05D005357 ORTHO05D006354 8.6e-165 584.3 505 64.6
FvH4_6g12190 Fragaria vesca HOM05D005357 ORTHO05D006354 3.3e-164 582.4 485 65.6
FAN09G0023 Fragaria x ananassa HOM05D005357 ORTHO05D006354 3.3e-164 582.4 485 65.6
FAN14G1666 Fragaria x ananassa HOM05D005357 ORTHO05D006354 3.3e-164 582.4 485 65.6
FAN14G2781 Fragaria x ananassa HOM05D005357 ORTHO05D006354 1.6e-163 580.1 485 65.4
TWI74G0304 Tripterygium wilfordii HOM05D005357 ORTHO05D006354 1.4e-162 577.0 446 69.1
Nitab4.5_0000008g0560 Nicotiana tabacum HOM05D005357 ORTHO05D006354 5.2e-162 575.1 503 62.6
Eucgr.B02762 Eucalyptus grandis HOM05D005357 ORTHO05D006354 2.0e-161 573.2 512 62.5
FAN05G3392 Fragaria x ananassa HOM05D005357 ORTHO05D006354 4.9e-160 568.5 485 64.3
FAN02G3235 Fragaria x ananassa HOM05D005357 ORTHO05D006354 6.4e-160 568.2 459 66.7
Cc06_g01760 Coffea canephora HOM05D005357 ORTHO05D006354 1.9e-159 566.6 505 63.0
Actinidia13789 Actinidia chinensis HOM05D005357 ORTHO05D006354 2.4e-159 566.2 506 60.9
CAN.G284.13 Capsicum annuum HOM05D005357 ORTHO05D006354 5.4e-159 565.1 507 61.1
CsaV3_3G034230 Cucumis sativus L. HOM05D005357 ORTHO05D006354 6.6e-157 558.1 504 62.5
Actinidia29139 Actinidia chinensis HOM05D005357 ORTHO05D006354 7.3e-156 554.7 505 60.8
Glyma.07G144300 Glycine max HOM05D005357 ORTHO05D006354 2.1e-155 553.1 496 61.9
arahy.Tifrunner.gnm1.ann1.H8VZ0K Arachis hypogaea HOM05D005357 ORTHO05D006354 3.6e-155 552.4 495 62.2
Sed0007832 Sechium edule HOM05D005357 ORTHO05D006354 1.5e-153 547.0 422 67.8
arahy.Tifrunner.gnm1.ann1.5ZZ6F4 Arachis hypogaea HOM05D005357 ORTHO05D006354 7.6e-153 544.7 514 60.3
Phvul.008G108800 Phaseolus vulgaris HOM05D005357 ORTHO05D006354 6.0e-150 535.0 497 61.6
Glyma.18G195500 Glycine max HOM05D005357 ORTHO05D006354 3.0e-149 532.7 497 61.2
MBI06_g17209_MAGBIO Magnolia biondii HOM05D005357 ORTHO05D006354 3.9e-149 532.3 524 60.7
Sabra06G0073400 Salix brachista HOM05D005357 ORTHO05D006354 1.2e-145 520.8 608 54.3
Lalb_Chr01g0022881 Lupinus albus HOM05D005357 ORTHO05D006354 4.2e-143 512.3 499 59.9
MELO3C009198.2 Cucumis melo HOM05D005357 ORTHO05D006354 7.1e-143 511.5 504 58.9
Medtr7g066710 Medicago truncatula HOM05D005357 ORTHO05D006354 2.1e-142 510.0 496 58.9
Medtr7g056183 Medicago truncatula HOM05D005357 ORTHO05D006354 2.3e-141 506.5 495 59.6
Gorai.012G111100 Gossypium raimondii HOM05D005357 ORTHO05D006354 1.1e-140 504.2 382 68.8
Lj3g0024478 Lotus japonicus HOM05D005357 ORTHO05D006354 1.5e-140 503.8 498 58.6
Gohir.A04G087700 Gossypium hirsutum HOM05D005357 ORTHO05D006354 2.5e-140 503.1 381 69.0
Ca_09168_v3 Cicer arietinum L. HOM05D005357 ORTHO05D006354 4.5e-137 492.3 493 57.2
EL10As5g23477 Beta vulgaris HOM05D005357 ORTHO05D006354 6.5e-136 488.4 503 56.3
PGR031G1436 Punica granatum HOM05D005357 ORTHO05D006354 2.7e-134 483.0 540 54.4
AUR62024704 Chenopodium quinoa HOM05D005357 ORTHO05D006354 1.9e-132 476.9 391 65.2
Lj2A78G31 Lonicera japonica HOM05D005357 ORTHO05D006354 2.1e-131 473.4 505 58.4
Lalb_Chr03g0042941 Lupinus albus HOM05D005357 ORTHO05D006354 1.4e-130 470.7 498 55.4
Gohir.D04G128100 Gossypium hirsutum HOM05D005357 ORTHO05D006354 1.8e-130 470.3 382 65.7
AUR62011861 Chenopodium quinoa HOM05D005357 ORTHO05D006354 5.3e-130 468.8 415 61.4
MSTRG.5603 Avicennia marina HOM05D005357 ORTHO05D006354 1.2e-129 467.6 505 56.2
Aqoxy1G00739 Aquilegia oxysepala HOM05D005357 ORTHO05D006354 1.3e-128 464.2 474 57.2
TPR.G1557 Trifolium pratense HOM05D005357 ORTHO05D006354 1.3e-128 464.2 394 62.9
vmacro01296 Vaccinium macrocarpon HOM05D005357 ORTHO05D006354 9.3e-127 458.0 509 54.6
SalBow3G4061 Salvia bowleyana HOM05D005357 ORTHO05D006354 1.6e-126 457.2 502 55.0
Dinv03649 Davidia involucrata HOM05D005357 ORTHO05D006354 6.7e-125 451.8 420 63.6
PGSC0003DMG402020324 Solanum tuberosum HOM05D005357 ORTHO05D006354 2.8e-123 446.4 502 52.4
GSVIVG01034021001 Vitis vinifera HOM05D005357 ORTHO05D006354 1.8e-122 443.7 498 52.4
CSS0020158 Camellia sinensis var. sinensis HOM05D005357 ORTHO05D006354 1.2e-121 441.0 389 65.0
Ah.11g049570 Amaranthus hybridus HOM05D005357 ORTHO05D006354 5.9e-121 438.7 503 53.1
PSO585G0030 Papaver somniferum HOM05D005357 ORTHO05D006354 5.0e-120 435.6 495 53.3
PSO384G3148 Papaver somniferum HOM05D005357 ORTHO05D006354 6.5e-120 435.3 495 52.7
Migut.J00234 Erythranthe guttata HOM05D005357 ORTHO05D006354 2.7e-118 429.9 495 54.1
Sopen09g006960 Solanum pennellii HOM05D005357 ORTHO05D006354 4.6e-118 429.1 500 52.2
Hund09607 Selenicereus undatus HOM05D005357 ORTHO05D006354 8.8e-117 424.9 393 58.8
Atru.chr8.2135 Acer truncatum HOM05D005357 ORTHO05D006354 4.8e-115 419.1 388 63.4
DCAR_005589 Daucus carota HOM05D005357 ORTHO05D006354 9.1e-114 414.8 506 49.8
THA.LOC104827038 Tarenaya hassleriana HOM05D005357 ORTHO05D006354 1.6e-110 404.1 434 54.4
Oeu030537.4 Olea europaea HOM05D005357 ORTHO05D006354 4.7e-110 402.5 478 50.4
SGA_v2.0_scaffold85G26772 Striga asiatica HOM05D005357 ORTHO05D006354 4.7e-110 402.5 492 51.0
Hund02920 Selenicereus undatus HOM05D005357 ORTHO05D006354 1.7e-107 394.0 393 57.3
HPP92_021066 Vanilla planifolia HOM05D005357 ORTHO05D006354 2.3e-101 373.6 523 47.0
PGSC0003DMG400002411 Solanum tuberosum HOM05D005357 ORTHO05D006354 4.8e-99 365.9 388 55.2
Psat3g131000 Pisum sativum HOM05D005357 ORTHO05D006354 1.8e-98 364.0 412 53.4
Aa31LG1G22800 Aethionema arabicum HOM05D005357 ORTHO05D006354 2.7e-97 360.1 499 45.9
Sp6g40520 Schrenkiella parvula HOM05D005357 ORTHO05D006354 3.2e-95 353.2 384 53.9
CDE04G3126 Ceratophyllum demersum HOM05D005357 ORTHO05D006354 4.2e-95 352.8 462 48.7
Carub.0006s0073 Capsella rubella HOM05D005357 ORTHO05D006354 5.5e-95 352.4 395 52.7
Thhalv10014073m.g Eutrema salsugineum HOM05D005357 ORTHO05D006354 1.2e-92 344.7 381 53.8
Oeu044369.1 Olea europaea HOM05D005357 ORTHO05D006354 6.3e-91 339.0 543 41.6
Sc05g0000650 Simmondsia chinensis HOM05D005357 ORTHO05D006354 2.4e-90 337.0 326 58.9
VMungo1383G1762 Vigna mungo HOM05D005357 ORTHO05D006354 9.1e-90 335.1 379 53.6
AL6G11040 Arabidopsis lyrata HOM05D005357 ORTHO05D006354 2.7e-89 333.6 384 53.1
AT5G01160 Arabidopsis thaliana HOM05D005357 ORTHO05D006354 5.9e-89 332.4 383 53.3
CARHR211480 Cardamine hirsuta HOM05D005357 ORTHO05D006354 5.0e-88 329.3 382 52.4
SGA_v2.0_scaffold75G24995 Striga asiatica HOM05D005357 ORTHO05D006354 1.6e-86 324.3 399 51.1
BcaB05g21942 Brassica carinata HOM05D005357 ORTHO05D006354 3.6e-86 323.2 393 50.9
A10p33610 Brassica napus HOM05D005357 ORTHO05D006354 4.7e-86 322.8 388 50.5
BcaNung02762 Brassica carinata HOM05D005357 ORTHO05D006354 2.2e-83 313.9 387 49.9
BolC9t60186H Brassica oleracea HOM05D005357 ORTHO05D006354 8.3e-83 312.0 380 50.3
C09p74540 Brassica napus HOM05D005357 ORTHO05D006354 1.1e-82 311.6 380 49.7
Os10g0494500 Oryza sativa ssp. japonica HOM05D005357 ORTHO05D006354 3.1e-82 310.1 440 44.1
BraA10t45393Z Brassica rapa HOM05D005357 ORTHO05D006354 7.0e-82 308.9 389 49.1
CDE03G0086 Ceratophyllum demersum HOM05D005357 ORTHO05D006354 7.0e-82 308.9 460 45.2
HanXRQChr13g0406371 Helianthus annuus HOM05D005357 ORTHO05D006354 7.7e-81 305.4 500 43.2
Zm00001eb044800 Zea mays HOM05D005357 ORTHO05D006354 7.3e-79 298.9 488 43.2
ECA248G2096 Erigeron canadensis HOM05D005357 ORTHO05D006354 2.6e-76 290.4 504 42.9
unitig_22.g6590 Utricularia gibba HOM05D005357 ORTHO05D006354 7.0e-74 282.3 503 41.2
BcaNung02766 Brassica carinata HOM05D005357 ORTHO05D006354 6.6e-72 275.8 386 45.9
Solyc09g013120.4 Solanum lycopersicum HOM05D005357 ORTHO05D006354 9.5e-71 271.9 396 46.2
Lsat_1_v5_gn_5_155380 Lactuca sativa HOM05D005357 ORTHO05D006354 2.6e-68 263.8 503 41.9
Zm00001eb221140 Zea mays HOM05D005357 ORTHO05D006354 1.0e-64 251.9 280 52.1
HanXRQChr13g0397571 Helianthus annuus HOM05D005357 ORTHO05D006354 3.6e-62 243.4 221 57.9
SHI12776 Sapria himalayana HOM05D005357 ORTHO05D006354 3.4e-60 236.9 464 40.3
HanXRQChr13g0397921 Helianthus annuus HOM05D005357 ORTHO05D006354 4.4e-60 236.5 247 53.4
SEGI_31043 Sequoiadendron giganteum HOM05D005357 ORTHO05D006354 9.9e-52 208.8 238 49.2
DCAR_008325 Daucus carota HOM05D005357 ORTHO05D006354 1.3e-48 198.4 244 43.9
Hma1.2p1_0125F.1_g058510 Hydrangea macrophylla HOM05D005357 ORTHO05D006354 2.3e-48 197.6 382 36.6
Atru.chr8.2134 Acer truncatum HOM05D005357 ORTHO05D006354 2.2e-43 181.0 108 80.6
Glyma.18G195800 Glycine max HOM05D005357 ORTHO05D006354 1.6e-41 174.9 249 46.6
ATR0605G041 Amborella trichopoda HOM05D005357 ORTHO05D006354 3.0e-40 170.6 403 35.5
Oeu055280.1 Olea europaea HOM05D005357 ORTHO05D006354 2.8e-38 164.1 265 45.3
Rhsim01G0256700 Rhododendron simsii HOM05D005357 ORTHO05D004574 4.2e-34 150.2 162 52.5
Mapoly0068s0057 Marchantia polymorpha HOM05D005357 ORTHO05D006354 3.0e-32 144.1 249 36.9
Pp3c20_10060 Physcomitrium patens HOM05D005357 ORTHO05D006354 4.3e-31 140.2 273 35.9
Pp3c23_4130 Physcomitrium patens HOM05D005357 ORTHO05D006354 4.8e-30 136.7 304 32.2
SEGI_08495 Sequoiadendron giganteum HOM05D054687 ORTHO05D006354 1.8e-29 134.8 400 31.5
PGSC0003DMG401020324 Solanum tuberosum HOM05D005357 ORTHO05D006354 1.2e-25 122.1 122 55.7
Pp3c8_18230 Physcomitrium patens HOM05D005357 ORTHO05D006354 1.3e-24 118.6 446 28.9
CBR_g24154 Chara braunii HOM05D005357 ORTHO05D006354 2.3e-24 117.9 106 46.2
CSS0030830 Camellia sinensis var. sinensis HOM05D005357 ORTHO05D006354 2.0e-20 104.8 68 75.0
Sopen01g013720 Solanum pennellii HOM05D005357 ORTHO05D006354 4.3e-15 87.0 109 50.5
Oeu020881.1 Olea europaea HOM05D005357 ORTHO05D006354 1.4e-10 72.0 80 60.0
RcHm_v2.0_Chr3g0492291 Rosa chinensis HOM05D005357 ORTHO05D006354 9.7e-07 59.3 52 63.5


User provided reference genes

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