Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 9.9e-236 819.7 404 100.0
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 1.6e-156 556.6 312 89.1
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 1.6e-153 546.6 303 89.8
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 1.6e-153 546.6 303 90.1
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 7.8e-148 527.7 303 85.8
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 2.3e-147 526.2 311 83.3
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 8.6e-147 524.2 303 85.5
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 1.9e-146 523.1 303 84.8
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 2.5e-146 522.7 298 86.2
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 2.8e-145 519.2 303 84.5
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 1.8e-144 516.5 303 84.8
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 2.3e-144 516.2 303 84.5
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 3.1e-144 515.8 303 84.2
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 8.9e-144 514.2 303 84.2
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 2.6e-143 512.7 310 81.0
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 2.6e-143 512.7 303 84.2
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 3.7e-142 508.8 303 84.8
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 3.7e-142 508.8 303 83.8
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 6.4e-142 508.1 303 83.8
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 1.9e-141 506.5 303 82.5
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 5.4e-141 505.0 298 83.9
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 9.2e-141 504.2 304 80.3
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 9.2e-141 504.2 303 82.8
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.1e-140 503.1 303 81.8
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.7e-140 502.7 301 82.4
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 2.7e-140 502.7 306 82.4
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 3.5e-140 502.3 303 82.2
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 1.0e-139 500.7 303 80.9
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 1.0e-139 500.7 299 82.9
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 1.0e-139 500.7 303 82.2
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 1.3e-139 500.4 303 81.2
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 1.7e-139 500.0 299 83.3
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 5.1e-139 498.4 303 80.9
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 5.1e-139 498.4 303 82.8
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 6.6e-139 498.0 303 80.9
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 8.6e-139 497.7 303 81.2
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 3.3e-138 495.7 297 81.5
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 3.3e-138 495.7 305 81.3
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 4.3e-138 495.4 303 80.9
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 1.2e-137 493.8 304 80.3
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 3.6e-137 492.3 305 78.7
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 3.6e-137 492.3 305 78.7
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 3.6e-137 492.3 303 80.9
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 6.2e-137 491.5 303 77.9
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 1.4e-136 490.3 303 80.2
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 1.8e-136 490.0 305 78.4
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 2.4e-136 489.6 305 78.0
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 2.4e-136 489.6 303 80.9
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 3.1e-136 489.2 305 77.7
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 3.1e-136 489.2 303 78.2
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 4.0e-136 488.8 305 78.0
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 8.9e-136 487.6 304 79.3
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 8.9e-136 487.6 304 79.3
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 2.0e-135 486.5 303 78.2
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 2.0e-135 486.5 303 78.5
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 2.0e-135 486.5 303 78.5
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 3.4e-135 485.7 303 77.6
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 5.8e-135 485.0 303 78.2
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 7.6e-135 484.6 292 84.9
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 2.2e-134 483.0 303 77.2
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 2.9e-134 482.6 303 77.6
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 3.8e-134 482.3 303 77.6
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 4.9e-134 481.9 303 78.2
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 4.9e-134 481.9 303 77.6
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 6.4e-134 481.5 305 77.7
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 7.1e-133 478.0 302 77.5
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 9.2e-133 477.6 305 78.4
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 1.2e-132 477.2 305 77.4
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 2.1e-132 476.5 303 78.9
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 6.0e-132 474.9 303 77.9
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 7.8e-132 474.6 303 76.6
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 5.1e-131 471.9 303 76.6
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 8.6e-131 471.1 305 77.4
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 9.6e-130 467.6 315 74.6
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 9.6e-130 467.6 303 75.9
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 9.6e-130 467.6 311 75.9
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 3.6e-129 465.7 300 76.3
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 6.2e-129 464.9 305 77.4
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 1.8e-128 463.4 305 77.0
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 3.1e-128 462.6 315 74.3
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 4.0e-128 462.2 299 77.3
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 7.6e-127 458.0 283 80.2
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 8.1e-121 438.0 262 82.8
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 1.3e-118 430.6 301 71.1
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 5.1e-115 418.7 247 84.6
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 1.1e-114 417.5 305 70.5
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 1.9e-114 416.8 300 69.0
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 4.3e-114 415.6 303 68.0
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 2.8e-113 412.9 300 68.7
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 7.6e-111 404.8 303 67.0
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 1.2e-108 397.5 286 69.2
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 3.0e-107 392.9 265 74.7
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 7.1e-101 371.7 242 76.0
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 1.1e-96 357.8 305 59.3
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 2.7e-92 343.2 220 77.7
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 7.9e-92 341.7 265 65.3
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 1.8e-91 340.5 230 74.3
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 8.8e-91 338.2 295 61.7
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 2.2e-89 333.6 284 59.9
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 1.4e-88 330.9 256 65.6
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 4.1e-88 329.3 304 55.3
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 5.9e-87 325.5 297 56.9
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.7e-86 323.9 196 81.1
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 5.1e-83 312.4 305 57.7
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 1.5e-74 284.3 196 69.9
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 4.4e-74 282.7 299 51.2
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 2.8e-65 253.4 213 62.0
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 2.8e-65 253.4 313 43.1
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 3.8e-62 243.0 303 50.2
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.7e-57 227.6 143 80.4
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.7e-57 227.6 144 81.2
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 4.1e-56 223.0 144 79.2
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 7.5e-50 202.2 144 75.0
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 6.3e-49 199.1 316 39.9
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 1.5e-45 188.0 164 54.3
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 5.2e-43 179.5 123 71.5
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 1.2e-39 168.3 263 44.1
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 6.6e-38 162.5 91 80.2
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 7.3e-37 159.1 362 32.0
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 1.1e-35 155.2 317 34.4
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 1.3e-30 138.3 353 30.0
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 3.4e-26 123.6 76 77.6
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 3.0e-14 84.0 43 86.0


User provided reference genes

Program Settings