Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p035708 Quercus lobata HOM05D007481 ORTHO05D009444 3.5e-146 521.5 252 100.0
CiPaw.10G156500 Carya illinoinensis HOM05D007481 ORTHO05D009444 5.4e-123 444.5 249 85.9
Cfa017210 Carpinus fangiana HOM05D007481 ORTHO05D009444 2.2e-116 422.5 232 85.8
Prupe.6G277100 Prunus persica HOM05D007481 ORTHO05D009444 1.3e-113 413.3 245 81.6
FAN05G5358 Fragaria x ananassa HOM05D007481 ORTHO05D009444 3.9e-113 411.8 247 78.9
RcHm_v2.0_Chr3g0463171 Rosa chinensis HOM05D007481 ORTHO05D009444 1.1e-112 410.2 246 78.9
MD04G1152000 Malus domestica HOM05D007481 ORTHO05D009444 9.6e-112 407.1 247 78.1
Manes.09G104600 Manihot esculenta HOM05D007481 ORTHO05D009444 8.1e-111 404.1 245 78.8
TWI74G0365 Tripterygium wilfordii HOM05D007481 ORTHO05D009444 8.1e-111 404.1 247 76.9
Dinv04699 Davidia involucrata HOM05D007481 ORTHO05D009444 5.3e-110 401.4 249 77.9
Thecc.05G016400 Theobroma cacao HOM05D007481 ORTHO05D009444 9.0e-110 400.6 252 77.0
Potri.006G100100 Populus trichocarpa HOM05D007481 ORTHO05D009444 2.6e-109 399.1 246 78.0
Gohir.D09G160700 Gossypium hirsutum HOM05D007481 ORTHO05D009444 4.4e-109 398.3 252 75.8
Actinidia11588 Actinidia chinensis HOM05D007481 ORTHO05D009444 4.9e-108 394.8 251 75.7
CSS0016102 Camellia sinensis var. sinensis HOM05D007481 ORTHO05D009444 4.9e-108 394.8 247 76.5
GSVIVG01033961001 Vitis vinifera HOM05D007481 ORTHO05D009444 6.4e-108 394.4 247 77.3
Nn2g13707 Nelumbo nucifera HOM05D007481 ORTHO05D009444 4.2e-107 391.7 250 73.6
CANSAT35G1044 Cannabis sativa HOM05D007481 ORTHO05D009444 5.4e-107 391.3 250 75.6
COL.COLO4_14539 Corchorus olitorius HOM05D007481 ORTHO05D009444 1.2e-106 390.2 255 73.3
THA.LOC104816191 Tarenaya hassleriana HOM05D007481 ORTHO05D009444 2.1e-106 389.4 246 75.6
FAN02G0465 Fragaria x ananassa HOM05D007481 ORTHO05D009444 3.5e-106 388.7 237 78.1
Sp6g40760 Schrenkiella parvula HOM05D007481 ORTHO05D009444 6.0e-106 387.9 246 74.4
Glyma.03G058200 Glycine max HOM05D007481 ORTHO05D009444 2.3e-105 386.0 251 74.1
Gorai.006G182400 Gossypium raimondii HOM05D007481 ORTHO05D009444 2.3e-105 386.0 287 66.6
Aa31LG1G23100 Aethionema arabicum HOM05D007481 ORTHO05D009444 1.1e-104 383.6 250 73.2
Sabra06G0076900 Salix brachista HOM05D007481 ORTHO05D009444 3.3e-104 382.1 246 74.8
ECA248G3524 Erigeron canadensis HOM05D007481 ORTHO05D009444 4.3e-104 381.7 250 72.4
Eucgr.B02817 Eucalyptus grandis HOM05D007481 ORTHO05D009444 4.3e-104 381.7 247 74.5
Thhalv10014504m.g Eutrema salsugineum HOM05D007481 ORTHO05D009444 9.6e-104 380.6 244 74.2
arahy.Tifrunner.gnm1.ann1.7RHW31 Arachis hypogaea HOM05D007481 ORTHO05D009444 1.3e-103 380.2 245 74.7
CAN.G616.2 Capsicum annuum HOM05D007481 ORTHO05D009444 1.6e-103 379.8 249 73.5
Lj3g0018029 Lotus japonicus HOM05D007481 ORTHO05D009444 1.6e-103 379.8 243 75.7
Phvul.010G001400 Phaseolus vulgaris HOM05D007481 ORTHO05D009444 1.6e-103 379.8 251 72.5
Solyc10g085160.2 Solanum lycopersicum HOM05D007481 ORTHO05D009444 6.2e-103 377.9 252 70.6
FAN14G0098 Fragaria x ananassa HOM05D007481 ORTHO05D009444 8.1e-103 377.5 306 62.7
Lalb_Chr07g0193571 Lupinus albus HOM05D007481 ORTHO05D009444 8.1e-103 377.5 242 76.0
Sopen10g034630 Solanum pennellii HOM05D007481 ORTHO05D009444 1.1e-102 377.1 252 70.6
Ca_20231_v3 Cicer arietinum L. HOM05D007481 ORTHO05D009444 3.1e-102 375.6 244 74.6
Medtr4g012440 Medicago truncatula HOM05D007481 ORTHO05D009444 4.0e-102 375.2 247 74.1
Peaxi162Scf00009g01813 Petunia axillaris HOM05D007481 ORTHO05D009444 4.0e-102 375.2 252 70.2
PGSC0003DMG400011097 Solanum tuberosum HOM05D007481 ORTHO05D009444 4.0e-102 375.2 252 70.2
AL6G10600 Arabidopsis lyrata HOM05D007481 ORTHO05D009444 5.3e-102 374.8 246 72.8
C02p00150 Brassica napus HOM05D007481 ORTHO05D009444 9.0e-102 374.0 243 74.5
MSTRG.10219 Avicennia marina HOM05D007481 ORTHO05D009444 1.5e-101 373.2 255 71.4
Migut.L02012 Erythranthe guttata HOM05D007481 ORTHO05D009444 2.6e-101 372.5 244 74.6
BcaB05g21923 Brassica carinata HOM05D007481 ORTHO05D009444 4.5e-101 371.7 247 72.9
Carub.0006s0036 Capsella rubella HOM05D007481 ORTHO05D009444 4.5e-101 371.7 242 72.7
Nitab4.5_0003666g0020 Nicotiana tabacum HOM05D007481 ORTHO05D009444 4.5e-101 371.7 252 72.2
BolC2t06012H Brassica oleracea HOM05D007481 ORTHO05D009444 7.6e-101 370.9 243 73.7
HanXRQChr01g0007111 Helianthus annuus HOM05D007481 ORTHO05D009444 9.9e-101 370.5 254 71.7
CARHR211840 Cardamine hirsuta HOM05D007481 ORTHO05D009444 1.3e-100 370.2 247 72.1
PGR031G3607 Punica granatum HOM05D007481 ORTHO05D009444 1.7e-100 369.8 243 73.7
ClCG04G007010 Citrullus lanatus HOM05D007481 ORTHO05D009444 2.9e-100 369.0 244 73.8
BraA02t04685Z Brassica rapa HOM05D007481 ORTHO05D009444 3.8e-100 368.6 243 73.3
Psat7g244960 Pisum sativum HOM05D007481 ORTHO05D009444 1.1e-99 367.1 244 73.0
Sed0020862 Sechium edule HOM05D007481 ORTHO05D009444 1.4e-99 366.7 242 73.1
Ciclev10012584m.g Citrus clementina HOM05D007481 ORTHO05D009444 1.9e-99 366.3 244 71.3
CsaV3_4G026270 Cucumis sativus L. HOM05D007481 ORTHO05D009444 2.4e-99 365.9 244 74.2
TPR.G13336 Trifolium pratense HOM05D007481 ORTHO05D009444 2.4e-99 365.9 249 72.7
BcaC03g13078 Brassica carinata HOM05D007481 ORTHO05D009444 3.2e-99 365.5 243 74.1
Cc06_g01380 Coffea canephora HOM05D007481 ORTHO05D009444 4.2e-99 365.2 244 71.7
AT5G01470 Arabidopsis thaliana HOM05D007481 ORTHO05D009444 5.4e-99 364.8 246 72.0
PSO801G0715 Papaver somniferum HOM05D007481 ORTHO05D009444 2.7e-98 362.5 254 68.9
Nitab4.5_0003024g0060 Nicotiana tabacum HOM05D007481 ORTHO05D009444 7.9e-98 360.9 266 68.8
FAN09G2325 Fragaria x ananassa HOM05D007481 ORTHO05D009444 1.0e-97 360.5 246 71.1
arahy.Tifrunner.gnm1.ann1.6XTR6T Arachis hypogaea HOM05D007481 ORTHO05D009444 1.3e-97 360.1 245 71.8
Aqoxy2G00902 Aquilegia oxysepala HOM05D007481 ORTHO05D009444 5.1e-97 358.2 245 69.4
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 2.5e-96 355.9 241 72.2
Lj3A953G52 Lonicera japonica HOM05D007481 ORTHO05D009444 9.6e-96 354.0 252 71.4
Duzib093G0021 Durio zibethinus HOM05D007481 ORTHO05D009444 2.4e-94 349.4 207 80.7
Sc07g0006570 Simmondsia chinensis HOM05D007481 ORTHO05D009444 3.1e-94 349.0 246 68.7
PSO339G5056 Papaver somniferum HOM05D007481 ORTHO05D009444 1.3e-92 343.6 246 68.3
Haze_20985 Corylus avellana HOM05D007481 ORTHO05D009444 3.8e-92 342.0 261 69.3
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 1.4e-91 340.1 262 62.6
vmacro20262 Vaccinium macrocarpon HOM05D007481 ORTHO05D009444 1.4e-91 340.1 248 70.2
unitig_736.g22787 Utricularia gibba HOM05D007481 ORTHO05D009444 8.7e-89 330.9 234 66.7
Rhsim05G0214800 Rhododendron simsii HOM05D007481 ORTHO05D009444 3.7e-87 325.5 304 56.9
Gohir.A09G165100 Gossypium hirsutum HOM05D007481 ORTHO05D009444 1.1e-86 323.9 186 81.7
Lsat_1_v5_gn_5_149561 Lactuca sativa HOM05D007481 ORTHO05D009444 4.0e-86 322.0 243 64.6
ATR0618G339 Amborella trichopoda HOM05D007481 ORTHO05D009444 1.5e-85 320.1 245 63.3
FvH4_6g11480 Fragaria vesca HOM05D007481 ORTHO05D009444 2.9e-84 315.8 192 79.7
TAR633G1799 Trochodendron aralioides HOM05D007481 ORTHO05D009444 9.3e-83 310.8 250 61.6
Hund11009 Selenicereus undatus HOM05D007481 ORTHO05D009444 4.6e-82 308.5 266 59.8
MELO3C003292.2 Cucumis melo HOM05D007481 ORTHO05D009444 3.7e-79 298.9 175 80.0
Zm00001eb063270 Zea mays HOM05D007481 ORTHO05D009444 1.4e-78 297.0 257 57.2
SEGI_08492 Sequoiadendron giganteum HOM05D007481 ORTHO05D009444 9.0e-78 294.3 279 54.5
Cpa.g.sc11.154 Carica papaya HOM05D007481 ORTHO05D009444 1.5e-77 293.5 246 63.4
SalBow4G1731 Salvia bowleyana HOM05D007481 ORTHO05D009444 1.7e-76 290.0 182 76.4
Pp3c17_21930 Physcomitrium patens HOM05D007481 ORTHO05D009444 2.5e-75 286.2 277 54.5
Os03g0826700 Oryza sativa ssp. japonica HOM05D007481 ORTHO05D009444 3.2e-75 285.8 248 59.3
CDE02G3625 Ceratophyllum demersum HOM05D007481 ORTHO05D009444 4.6e-74 282.0 184 75.0
Mapoly0103s0024 Marchantia polymorpha HOM05D007481 ORTHO05D009444 7.4e-72 274.6 269 53.9
FAN14G2270 Fragaria x ananassa HOM05D000872 ORTHO05D000777 2.8e-71 272.7 312 50.3
SMO119G0350 Selaginella moellendorffii HOM05D007481 ORTHO05D009444 3.1e-70 269.2 211 60.7
AagrBONN_evm.TU.Sc2ySwM_228.1780 Anthoceros agrestis HOM05D007481 ORTHO05D009444 8.5e-68 261.2 216 58.3
CBR_g4113 Chara braunii HOM05D007481 ORTHO05D009444 9.7e-64 247.7 283 47.0
MBI14_g30737_MAGBIO Magnolia biondii HOM05D007481 ORTHO05D009444 2.4e-62 243.0 263 51.0
DCAR_015418 Daucus carota HOM05D007481 ORTHO05D009444 3.0e-57 226.1 136 77.2
VMungo0331G0457 Vigna mungo HOM05D007481 ORTHO05D009444 2.2e-52 209.9 134 74.6
HPP92_003771 Vanilla planifolia HOM05D007481 ORTHO05D009444 5.2e-49 198.7 181 57.5
Atru.chr8.2241 Acer truncatum HOM05D007481 ORTHO05D009444 1.3e-44 184.1 116 75.0
Oeu006297.1 Olea europaea HOM05D007481 ORTHO05D009444 2.7e-29 133.3 85 76.5
EL10Ac5g12562 Beta vulgaris HOM05D007481 ORTHO05D009444 4.3e-27 125.9 93 66.7
Eucgr.B02818 Eucalyptus grandis HOM05D007481 ORTHO05D009444 3.4e-24 116.3 88 64.8
AUR62030437 Chenopodium quinoa HOM05D007481 ORTHO05D009444 2.1e-10 70.5 36 77.8
Pp3c26_2100 Physcomitrium patens HOM05D001602 ORTHO05D001470 9.9e-08 61.6 121 28.9
Mapoly0001s0305 Marchantia polymorpha HOM05D002956 ORTHO05D008031 3.7e-07 59.7 182 29.1
RcHm_v2.0_Chr2g0101571 Rosa chinensis HOM05D005677 ORTHO05D006966 4.9e-07 59.3 195 28.7
FvH4_1g13310 Fragaria vesca HOM05D005677 ORTHO05D006966 8.3e-07 58.5 197 28.4
FAN26G2780 Fragaria x ananassa HOM05D005677 ORTHO05D006966 8.3e-07 58.5 197 28.4
PSO541G1183 Papaver somniferum HOM05D006745 ORTHO05D008449 8.3e-07 58.5 120 27.5
SMO307G0066 Selaginella moellendorffii HOM05D002553 ORTHO05D002767 8.3e-07 58.5 124 28.2
Mapoly0041s0084 Marchantia polymorpha HOM05D006745 ORTHO05D008449 2.4e-06 57.0 118 27.1
FAN19G0062 Fragaria x ananassa HOM05D005677 ORTHO05D006966 3.2e-06 56.6 197 27.9


User provided reference genes

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