Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p035122 Quercus lobata HOM05D009126 ORTHO05D011285 1.8e-34 148.7 76 100.0
CiPaw.07G134400 Carya illinoinensis HOM05D009126 ORTHO05D011285 4.1e-10 67.8 51 74.5
CSS0000199 Camellia sinensis var. sinensis HOM05D009126 ORTHO05D011285 2.1e-09 65.5 39 84.6
Solyc01g088040.3 Solanum lycopersicum HOM05D009126 ORTHO05D011285 2.7e-09 65.1 44 70.5
Ciclev10003083m.g Citrus clementina HOM05D009126 ORTHO05D011285 3.5e-09 64.7 51 70.6
Rhsim06G0003900 Rhododendron simsii HOM05D009126 ORTHO05D011285 4.6e-09 64.3 39 84.6
ClCG11G018970 Citrullus lanatus HOM05D009126 ORTHO05D011285 7.8e-09 63.5 45 71.1
Hma1.2p1_0699F.1_g205690 Hydrangea macrophylla HOM05D009126 ORTHO05D011285 1.3e-08 62.8 39 84.6
Thecc.08G064400 Theobroma cacao HOM05D009126 ORTHO05D011285 1.3e-08 62.8 51 68.6
Atru.chr13.74 Acer truncatum HOM05D009126 ORTHO05D011285 1.7e-08 62.4 51 64.7
Cfa014130 Carpinus fangiana HOM05D009126 ORTHO05D011285 1.7e-08 62.4 39 79.5
CiPaw.08G076800 Carya illinoinensis HOM05D009126 ORTHO05D011285 2.3e-08 62.0 48 70.8
Sed0014859 Sechium edule HOM05D009126 ORTHO05D011285 2.3e-08 62.0 48 64.6
Manes.18G002601 Manihot esculenta HOM05D009126 ORTHO05D011285 3.9e-08 61.2 51 68.6
Aa31sc158G30 Aethionema arabicum HOM05D009126 ORTHO05D011285 6.6e-08 60.5 50 68.0
TAR625G1075 Trochodendron aralioides HOM05D009126 ORTHO05D011285 8.7e-08 60.1 38 78.9
CsaV3_4G037570 Cucumis sativus L. HOM05D009126 ORTHO05D011285 1.5e-07 59.3 51 62.7
TAR381G1079 Trochodendron aralioides HOM05D009126 ORTHO05D011285 2.5e-07 58.5 34 85.3
Cfa003654 Carpinus fangiana HOM05D009126 ORTHO05D011285 3.3e-07 58.2 39 74.4
vmacro21775 Vaccinium macrocarpon HOM05D009126 ORTHO05D011285 3.3e-07 58.2 36 83.3
Carub.0005s1498 Capsella rubella HOM05D009126 ORTHO05D011285 9.6e-07 56.6 51 62.7
Gohir.A01G102266 Gossypium hirsutum HOM05D009126 ORTHO05D011285 1.2e-06 56.2 39 66.7
Gohir.D01G087401 Gossypium hirsutum HOM05D009126 ORTHO05D011285 1.2e-06 56.2 39 66.7


User provided reference genes

Program Settings