Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p034638 Quercus lobata HOM05D001910 ORTHO05D008236 8.9e-96 353.6 178 100.0
Haze_24772 Corylus avellana HOM05D001910 ORTHO05D008236 6.0e-36 154.8 151 57.6
QL04p069147 Quercus lobata HOM05D001910 ORTHO05D008236 6.0e-36 154.8 154 61.0
QL08p015961 Quercus lobata HOM05D001910 ORTHO05D008236 6.0e-36 154.8 172 55.2
QL04p055010 Quercus lobata HOM05D001910 ORTHO05D008236 7.9e-36 154.5 154 61.0
QL07p034561 Quercus lobata HOM05D001910 ORTHO05D008236 1.3e-35 153.7 166 57.2
vmacro11682 Vaccinium macrocarpon HOM05D001910 ORTHO05D008236 2.3e-35 152.9 149 57.0
Cfa002548 Carpinus fangiana HOM05D001910 ORTHO05D008236 3.0e-35 152.5 149 58.4
vmacro14768 Vaccinium macrocarpon HOM05D001910 ORTHO05D008236 3.9e-35 152.1 149 58.4
TAR365G0897 Trochodendron aralioides HOM05D001910 ORTHO05D008236 5.1e-35 151.8 149 57.0
CiPaw.03G151600 Carya illinoinensis HOM05D001910 ORTHO05D008236 6.7e-35 151.4 149 57.7
Hma1.2p1_0670F.1_g200480 Hydrangea macrophylla HOM05D001910 ORTHO05D008236 8.7e-35 151.0 165 52.1
Rhsim01G0257800 Rhododendron simsii HOM05D001910 ORTHO05D008236 8.7e-35 151.0 149 57.7
DCAR_012631 Daucus carota HOM05D001910 ORTHO05D008236 1.1e-34 150.6 145 57.9
Dinv04667 Davidia involucrata HOM05D001910 ORTHO05D008236 1.1e-34 150.6 149 57.0
Psat5g176160 Pisum sativum HOM05D001910 ORTHO05D008236 1.9e-34 149.8 149 55.7
Lalb_Chr21g0313131 Lupinus albus HOM05D001910 ORTHO05D008236 2.5e-34 149.4 149 54.4
THA.LOC104808775 Tarenaya hassleriana HOM05D001910 ORTHO05D008236 2.5e-34 149.4 149 55.0
Lsat_1_v5_gn_5_179721 Lactuca sativa HOM05D001910 ORTHO05D008236 3.3e-34 149.1 145 57.2
TPR.G22393 Trifolium pratense HOM05D001910 ORTHO05D008236 3.3e-34 149.1 149 57.0
GSVIVG01028558001 Vitis vinifera HOM05D001910 ORTHO05D008236 3.3e-34 149.1 149 57.0
Aqoxy2G03787 Aquilegia oxysepala HOM05D001910 ORTHO05D008236 4.3e-34 148.7 143 57.3
Eucgr.H00809 Eucalyptus grandis HOM05D001910 ORTHO05D008236 4.3e-34 148.7 149 57.0
Hma1.2p1_0670F.1_g200490 Hydrangea macrophylla HOM05D001910 ORTHO05D008236 4.3e-34 148.7 149 56.4
Ciclev10022683m.g Citrus clementina HOM05D001910 ORTHO05D008236 7.4e-34 147.9 149 55.7
Manes.12G042200 Manihot esculenta HOM05D001910 ORTHO05D008236 7.4e-34 147.9 149 53.7
Nn1g03143 Nelumbo nucifera HOM05D001910 ORTHO05D008236 7.4e-34 147.9 149 55.7
QL08p015909 Quercus lobata HOM05D001910 ORTHO05D008236 9.7e-34 147.5 75 96.0
CSS0019761 Camellia sinensis var. sinensis HOM05D001910 ORTHO05D008236 1.3e-33 147.1 149 56.4
Medtr1g080840 Medicago truncatula HOM05D001910 ORTHO05D008236 1.3e-33 147.1 149 55.7
CsaV3_7G025770 Cucumis sativus L. HOM05D001910 ORTHO05D008236 1.6e-33 146.7 144 59.0
Gohir.D01G042702 Gossypium hirsutum HOM05D001910 ORTHO05D008236 1.6e-33 146.7 144 56.9
Gorai.002G053700 Gossypium raimondii HOM05D001910 ORTHO05D008236 1.6e-33 146.7 144 56.9
Potri.001G287600 Populus trichocarpa HOM05D001910 ORTHO05D008236 1.6e-33 146.7 144 56.2
THA.LOC104821641 Tarenaya hassleriana HOM05D001910 ORTHO05D008236 1.6e-33 146.7 149 55.0
arahy.Tifrunner.gnm1.ann1.BW0B7M Arachis hypogaea HOM05D001910 ORTHO05D008236 2.2e-33 146.4 144 56.9
CANSAT01G2429 Cannabis sativa HOM05D001910 ORTHO05D008236 2.2e-33 146.4 149 55.7
HanXRQChr01g0014701 Helianthus annuus HOM05D001910 ORTHO05D008236 2.2e-33 146.4 145 55.9
CANSAT01G0581 Cannabis sativa HOM05D001910 ORTHO05D008236 2.8e-33 146.0 144 58.3
arahy.Tifrunner.gnm1.ann1.6V862X Arachis hypogaea HOM05D001910 ORTHO05D008236 3.7e-33 145.6 144 56.2
Ca_10470_v3 Cicer arietinum L. HOM05D001910 ORTHO05D008236 3.7e-33 145.6 149 56.4
COL.COLO4_17529 Corchorus olitorius HOM05D001910 ORTHO05D008236 3.7e-33 145.6 144 57.6
Duzib213G0818 Durio zibethinus HOM05D001910 ORTHO05D008236 3.7e-33 145.6 143 57.3
Sabra16G0179900 Salix brachista HOM05D001910 ORTHO05D008236 3.7e-33 145.6 144 55.6
Sc05g0002380 Simmondsia chinensis HOM05D001910 ORTHO05D008236 3.7e-33 145.6 149 54.4
Lj5g0025373 Lotus japonicus HOM05D001910 ORTHO05D008236 4.8e-33 145.2 149 55.0
Sed0026342 Sechium edule HOM05D001910 ORTHO05D008236 6.3e-33 144.8 149 55.0
Lj5g0014177 Lotus japonicus HOM05D001910 ORTHO05D008236 8.2e-33 144.4 149 55.7
SEGI_34564 Sequoiadendron giganteum HOM05D001910 ORTHO05D008236 8.2e-33 144.4 144 53.5
Cpa.g.sc8.177 Carica papaya HOM05D001910 ORTHO05D008236 1.1e-32 144.1 143 55.9
Thecc.07G118300 Theobroma cacao HOM05D001910 ORTHO05D008236 1.1e-32 144.1 144 56.9
Oeu020385.1 Olea europaea HOM05D001910 ORTHO05D008236 1.4e-32 143.7 149 55.0
ClCG09G009170 Citrullus lanatus HOM05D001910 ORTHO05D008236 1.8e-32 143.3 143 57.3
MELO3C012778.2 Cucumis melo HOM05D001910 ORTHO05D008236 1.8e-32 143.3 144 56.9
Gohir.A01G053300 Gossypium hirsutum HOM05D001910 ORTHO05D008236 1.8e-32 143.3 144 55.6
Nitab4.5_0002085g0120 Nicotiana tabacum HOM05D001910 ORTHO05D008236 1.8e-32 143.3 145 57.2
MD11G1172800 Malus domestica HOM05D001910 ORTHO05D008236 2.4e-32 142.9 144 57.6
Prupe.2G099400 Prunus persica HOM05D001910 ORTHO05D008236 2.4e-32 142.9 149 54.4
Solyc06g083570.3 Solanum lycopersicum HOM05D001910 ORTHO05D008236 2.4e-32 142.9 144 56.9
Sopen06g034950 Solanum pennellii HOM05D001910 ORTHO05D008236 2.4e-32 142.9 144 56.9
Atru.chr8.786 Acer truncatum HOM05D001910 ORTHO05D008236 3.1e-32 142.5 144 55.6
CDE02G3332 Ceratophyllum demersum HOM05D001910 ORTHO05D008236 4.1e-32 142.1 144 56.9
Cc02_g29620 Coffea canephora HOM05D001910 ORTHO05D008236 4.1e-32 142.1 149 56.4
FvH4_3g25760 Fragaria vesca HOM05D001910 ORTHO05D008236 4.1e-32 142.1 149 53.0
FAN11G0824 Fragaria x ananassa HOM05D001910 ORTHO05D008236 4.1e-32 142.1 149 53.0
FAN25G3251 Fragaria x ananassa HOM05D001910 ORTHO05D008236 4.1e-32 142.1 144 55.6
RcHm_v2.0_Chr5g0046911 Rosa chinensis HOM05D001910 ORTHO05D008236 4.1e-32 142.1 149 52.3
Duzib116G0073 Durio zibethinus HOM05D001910 ORTHO05D008236 5.3e-32 141.7 144 55.6
ATR0580G225 Amborella trichopoda HOM05D001910 ORTHO05D008236 6.9e-32 141.4 155 53.5
Hund05522 Selenicereus undatus HOM05D001910 ORTHO05D008236 6.9e-32 141.4 149 52.3
PGSC0003DMG400020157 Solanum tuberosum HOM05D001910 ORTHO05D008236 6.9e-32 141.4 144 56.2
Actinidia30091 Actinidia chinensis HOM05D001910 ORTHO05D008236 9.0e-32 141.0 149 53.7
Actinidia37580 Actinidia chinensis HOM05D001910 ORTHO05D008236 9.0e-32 141.0 149 54.4
Glyma.20G189700 Glycine max HOM05D001910 ORTHO05D008236 9.0e-32 141.0 149 52.3
PSO455G0057 Papaver somniferum HOM05D001910 ORTHO05D008236 1.2e-31 140.6 149 52.3
PGR083G0261 Punica granatum HOM05D001910 ORTHO05D008236 1.2e-31 140.6 149 53.0
EL10Ac1g01456 Beta vulgaris HOM05D001910 ORTHO05D008236 2.0e-31 139.8 144 54.2
EL10Ac4g08878 Beta vulgaris HOM05D001910 ORTHO05D008236 2.0e-31 139.8 144 54.2
CAN.G771.59 Capsicum annuum HOM05D001910 ORTHO05D008236 2.0e-31 139.8 149 54.4
Thhalv10002702m.g Eutrema salsugineum HOM05D001910 ORTHO05D008236 2.0e-31 139.8 144 55.6
FAN16G2655 Fragaria x ananassa HOM05D001910 ORTHO05D008236 2.0e-31 139.8 144 54.2
AUR62044047 Chenopodium quinoa HOM05D001910 ORTHO05D008236 2.6e-31 139.4 76 82.9
Peaxi162Scf00517g00431 Petunia axillaris HOM05D001910 ORTHO05D008236 2.6e-31 139.4 144 54.9
MSTRG.21434 Avicennia marina HOM05D001910 ORTHO05D008236 3.4e-31 139.0 149 51.7
AUR62037535 Chenopodium quinoa HOM05D001910 ORTHO05D008236 4.5e-31 138.7 75 84.0
AT3G24730 Arabidopsis thaliana HOM05D001910 ORTHO05D008236 1.0e-30 137.5 143 53.1
BcaC01g03256 Brassica carinata HOM05D001910 ORTHO05D008236 1.0e-30 137.5 144 54.2
C03p54270 Brassica napus HOM05D001910 ORTHO05D008236 1.0e-30 137.5 144 54.2
BolC3t17713H Brassica oleracea HOM05D001910 ORTHO05D008236 1.0e-30 137.5 144 54.2
Migut.D00518 Erythranthe guttata HOM05D001910 ORTHO05D008236 1.0e-30 137.5 149 49.7
Sp3g22460 Schrenkiella parvula HOM05D001910 ORTHO05D008236 1.0e-30 137.5 144 54.2
BraA03t13522Z Brassica rapa HOM05D001910 ORTHO05D008236 1.3e-30 137.1 144 54.2
Carub.0003s2512 Capsella rubella HOM05D001910 ORTHO05D008236 1.3e-30 137.1 155 50.3
AL3G40450 Arabidopsis lyrata HOM05D001910 ORTHO05D008236 1.7e-30 136.7 144 52.8
SGA_v2.0_scaffold467G52032 Striga asiatica HOM05D001910 ORTHO05D008236 1.7e-30 136.7 149 51.7
CARHR101060 Cardamine hirsuta HOM05D001910 ORTHO05D008236 2.2e-30 136.3 145 52.4
Nitab4.5_0006465g0020 Nicotiana tabacum HOM05D001910 ORTHO05D008236 2.9e-30 136.0 80 82.5
BcaB03g14567 Brassica carinata HOM05D001910 ORTHO05D008236 3.8e-30 135.6 144 52.8
Phvul.007G144300 Phaseolus vulgaris HOM05D001910 ORTHO05D008236 3.8e-30 135.6 149 52.3
SMO367G1217 Selaginella moellendorffii HOM05D001910 ORTHO05D008236 5.0e-30 135.2 149 50.3
HPP92_008933 Vanilla planifolia HOM05D001910 ORTHO05D008236 5.0e-30 135.2 143 53.1
VMungo0720G1587 Vigna mungo HOM05D001910 ORTHO05D008236 8.5e-30 134.4 141 55.3
A03p43920 Brassica napus HOM05D001910 ORTHO05D008236 1.9e-29 133.3 75 82.7
Mapoly0023s0044 Marchantia polymorpha HOM05D001910 ORTHO05D008236 2.5e-29 132.9 81 79.0
SalBow4G2176 Salvia bowleyana HOM05D001910 ORTHO05D008236 4.2e-29 132.1 149 49.0
TWI36G0271 Tripterygium wilfordii HOM05D001910 ORTHO05D008236 5.5e-29 131.7 76 81.6
unitig_8.g3604 Utricularia gibba HOM05D001910 ORTHO05D008236 2.7e-28 129.4 149 48.3
Zm00001eb327680 Zea mays HOM05D001910 ORTHO05D008236 4.6e-28 128.6 143 50.3
Pp3c22_7790 Physcomitrium patens HOM05D001910 ORTHO05D008236 1.3e-27 127.1 75 76.0
Os11g0297900 Oryza sativa ssp. japonica HOM05D001910 ORTHO05D008236 3.9e-27 125.6 149 47.7
RcHm_v2.0_Chr5g0047331 Rosa chinensis HOM05D001910 ORTHO05D008236 5.1e-27 125.2 75 77.3
SGA_v2.0_scaffold1G00713 Striga asiatica HOM05D001910 ORTHO05D008236 5.1e-27 125.2 172 45.3
AagrBONN_evm.TU.Sc2ySwM_117.2466 Anthoceros agrestis HOM05D001910 ORTHO05D008236 6.7e-27 124.8 149 47.0
Aa31LG8G7820 Aethionema arabicum HOM05D001910 ORTHO05D008236 1.9e-26 123.2 83 72.3
Lj2A1134T22 Lonicera japonica HOM05D001910 ORTHO05D008236 3.8e-22 109.0 132 52.3
Lj5g0012786 Lotus japonicus HOM05D001910 ORTHO05D008236 3.6e-20 102.4 145 46.9
CBR_g52407 Chara braunii HOM05D001910 ORTHO05D008236 1.4e-16 90.5 126 43.7
BcaB06g26686 Brassica carinata HOM05D001910 ORTHO05D008236 1.8e-11 73.6 59 66.1
QL07p034597 Quercus lobata HOM05D001910 ORTHO05D008236 4.5e-07 58.9 107 45.8
QL08p015943 Quercus lobata HOM05D001910 ORTHO05D008236 7.7e-07 58.2 107 44.9


User provided reference genes

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