Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p034597 Quercus lobata HOM05D001910 ORTHO05D008236 6.9e-67 257.3 143 100.0
QL04p069147 Quercus lobata HOM05D001910 ORTHO05D008236 1.5e-29 133.3 73 97.3
QL07p034561 Quercus lobata HOM05D001910 ORTHO05D008236 1.7e-28 129.8 73 94.5
QL08p015961 Quercus lobata HOM05D001910 ORTHO05D008236 4.9e-28 128.3 73 93.2
QL04p055010 Quercus lobata HOM05D001910 ORTHO05D008236 6.4e-28 127.9 73 93.2
QL08p015943 Quercus lobata HOM05D001910 ORTHO05D008236 6.4e-28 127.9 73 93.2
Hma1.2p1_0670F.1_g200480 Hydrangea macrophylla HOM05D001910 ORTHO05D008236 1.1e-24 117.1 71 83.1
Hma1.2p1_0670F.1_g200490 Hydrangea macrophylla HOM05D001910 ORTHO05D008236 1.1e-24 117.1 71 83.1
Actinidia30091 Actinidia chinensis HOM05D001910 ORTHO05D008236 1.5e-24 116.7 71 81.7
CiPaw.03G151600 Carya illinoinensis HOM05D001910 ORTHO05D008236 1.5e-24 116.7 71 84.5
Dinv04667 Davidia involucrata HOM05D001910 ORTHO05D008236 1.9e-24 116.3 71 87.3
Haze_24772 Corylus avellana HOM05D001910 ORTHO05D008236 5.6e-24 114.8 71 84.5
Lj5g0014177 Lotus japonicus HOM05D001910 ORTHO05D008236 7.3e-24 114.4 71 81.7
Cfa002548 Carpinus fangiana HOM05D001910 ORTHO05D008236 9.5e-24 114.0 71 84.5
HanXRQChr01g0014701 Helianthus annuus HOM05D001910 ORTHO05D008236 9.5e-24 114.0 71 81.7
Lj5g0012786 Lotus japonicus HOM05D001910 ORTHO05D008236 1.6e-23 113.2 71 80.3
PGR083G0261 Punica granatum HOM05D001910 ORTHO05D008236 1.6e-23 113.2 71 80.3
TPR.G22393 Trifolium pratense HOM05D001910 ORTHO05D008236 1.6e-23 113.2 71 80.3
COL.COLO4_17529 Corchorus olitorius HOM05D001910 ORTHO05D008236 2.1e-23 112.8 71 81.7
Nn1g03143 Nelumbo nucifera HOM05D001910 ORTHO05D008236 2.1e-23 112.8 71 81.7
Manes.12G042200 Manihot esculenta HOM05D001910 ORTHO05D008236 2.8e-23 112.5 71 78.9
Nitab4.5_0002085g0120 Nicotiana tabacum HOM05D001910 ORTHO05D008236 2.8e-23 112.5 70 81.4
Potri.001G287600 Populus trichocarpa HOM05D001910 ORTHO05D008236 2.8e-23 112.5 74 78.4
Rhsim01G0257800 Rhododendron simsii HOM05D001910 ORTHO05D008236 2.8e-23 112.5 71 83.1
CSS0019761 Camellia sinensis var. sinensis HOM05D001910 ORTHO05D008236 4.7e-23 111.7 71 80.3
Eucgr.H00809 Eucalyptus grandis HOM05D001910 ORTHO05D008236 4.7e-23 111.7 71 81.7
Lj5g0025373 Lotus japonicus HOM05D001910 ORTHO05D008236 4.7e-23 111.7 71 78.9
Oeu020385.1 Olea europaea HOM05D001910 ORTHO05D008236 4.7e-23 111.7 70 82.9
THA.LOC104808775 Tarenaya hassleriana HOM05D001910 ORTHO05D008236 4.7e-23 111.7 71 78.9
Actinidia37580 Actinidia chinensis HOM05D001910 ORTHO05D008236 6.2e-23 111.3 71 78.9
Ciclev10022683m.g Citrus clementina HOM05D001910 ORTHO05D008236 6.2e-23 111.3 71 78.9
Gohir.D01G042702 Gossypium hirsutum HOM05D001910 ORTHO05D008236 6.2e-23 111.3 71 78.9
Gorai.002G053700 Gossypium raimondii HOM05D001910 ORTHO05D008236 6.2e-23 111.3 71 78.9
Lsat_1_v5_gn_5_179721 Lactuca sativa HOM05D001910 ORTHO05D008236 6.2e-23 111.3 71 77.5
Aqoxy2G03787 Aquilegia oxysepala HOM05D001910 ORTHO05D008236 8.0e-23 110.9 73 78.1
Prupe.2G099400 Prunus persica HOM05D001910 ORTHO05D008236 8.0e-23 110.9 70 81.4
EL10Ac4g08878 Beta vulgaris HOM05D001910 ORTHO05D008236 1.1e-22 110.5 82 70.7
Gohir.A01G053300 Gossypium hirsutum HOM05D001910 ORTHO05D008236 1.1e-22 110.5 71 78.9
Sabra16G0179900 Salix brachista HOM05D001910 ORTHO05D008236 1.1e-22 110.5 75 77.3
EL10Ac1g01456 Beta vulgaris HOM05D001910 ORTHO05D008236 1.4e-22 110.2 82 70.7
Duzib213G0818 Durio zibethinus HOM05D001910 ORTHO05D008236 1.4e-22 110.2 71 78.9
THA.LOC104821641 Tarenaya hassleriana HOM05D001910 ORTHO05D008236 1.4e-22 110.2 71 78.9
arahy.Tifrunner.gnm1.ann1.BW0B7M Arachis hypogaea HOM05D001910 ORTHO05D008236 1.8e-22 109.8 71 78.9
CsaV3_7G025770 Cucumis sativus L. HOM05D001910 ORTHO05D008236 1.8e-22 109.8 71 81.7
SEGI_34564 Sequoiadendron giganteum HOM05D001910 ORTHO05D008236 1.8e-22 109.8 71 76.1
TAR365G0897 Trochodendron aralioides HOM05D001910 ORTHO05D008236 1.8e-22 109.8 71 78.9
vmacro14768 Vaccinium macrocarpon HOM05D001910 ORTHO05D008236 1.8e-22 109.8 68 85.3
Thecc.07G118300 Theobroma cacao HOM05D001910 ORTHO05D008236 2.3e-22 109.4 71 78.9
vmacro11682 Vaccinium macrocarpon HOM05D001910 ORTHO05D008236 2.3e-22 109.4 68 82.4
CDE02G3332 Ceratophyllum demersum HOM05D001910 ORTHO05D008236 3.1e-22 109.0 71 81.7
Sed0026342 Sechium edule HOM05D001910 ORTHO05D008236 3.1e-22 109.0 71 80.3
GSVIVG01028558001 Vitis vinifera HOM05D001910 ORTHO05D008236 3.1e-22 109.0 71 78.9
arahy.Tifrunner.gnm1.ann1.6V862X Arachis hypogaea HOM05D001910 ORTHO05D008236 4.0e-22 108.6 71 77.5
Ca_10470_v3 Cicer arietinum L. HOM05D001910 ORTHO05D008236 4.0e-22 108.6 71 81.7
Atru.chr8.786 Acer truncatum HOM05D001910 ORTHO05D008236 5.2e-22 108.2 71 78.9
MELO3C012778.2 Cucumis melo HOM05D001910 ORTHO05D008236 5.2e-22 108.2 71 78.9
PSO455G0057 Papaver somniferum HOM05D001910 ORTHO05D008236 5.2e-22 108.2 71 78.9
Hund05522 Selenicereus undatus HOM05D001910 ORTHO05D008236 5.2e-22 108.2 71 76.1
Solyc06g083570.3 Solanum lycopersicum HOM05D001910 ORTHO05D008236 5.2e-22 108.2 70 77.1
Sopen06g034950 Solanum pennellii HOM05D001910 ORTHO05D008236 5.2e-22 108.2 70 77.1
RcHm_v2.0_Chr5g0046911 Rosa chinensis HOM05D001910 ORTHO05D008236 6.8e-22 107.8 71 77.5
MD11G1172800 Malus domestica HOM05D001910 ORTHO05D008236 8.9e-22 107.5 71 78.9
Medtr1g080840 Medicago truncatula HOM05D001910 ORTHO05D008236 8.9e-22 107.5 71 77.5
PGSC0003DMG400020157 Solanum tuberosum HOM05D001910 ORTHO05D008236 1.5e-21 106.7 70 75.7
ATR0580G225 Amborella trichopoda HOM05D001910 ORTHO05D008236 2.0e-21 106.3 71 74.6
CANSAT01G0581 Cannabis sativa HOM05D001910 ORTHO05D008236 2.0e-21 106.3 71 77.5
Carub.0003s2512 Capsella rubella HOM05D001910 ORTHO05D008236 2.0e-21 106.3 73 72.6
CAN.G771.59 Capsicum annuum HOM05D001910 ORTHO05D008236 2.0e-21 106.3 70 77.1
Lalb_Chr21g0313131 Lupinus albus HOM05D001910 ORTHO05D008236 2.0e-21 106.3 71 74.6
Peaxi162Scf00517g00431 Petunia axillaris HOM05D001910 ORTHO05D008236 2.6e-21 105.9 70 72.9
Cc02_g29620 Coffea canephora HOM05D001910 ORTHO05D008236 3.4e-21 105.5 71 77.5
Lj2A1134T22 Lonicera japonica HOM05D001910 ORTHO05D008236 3.4e-21 105.5 83 71.1
Sp3g22460 Schrenkiella parvula HOM05D001910 ORTHO05D008236 3.4e-21 105.5 70 77.1
AL3G40450 Arabidopsis lyrata HOM05D001910 ORTHO05D008236 7.5e-21 104.4 71 74.6
Duzib116G0073 Durio zibethinus HOM05D001910 ORTHO05D008236 7.5e-21 104.4 71 73.2
Psat5g176160 Pisum sativum HOM05D001910 ORTHO05D008236 7.5e-21 104.4 71 74.6
C03p54270 Brassica napus HOM05D001910 ORTHO05D008236 9.8e-21 104.0 75 70.7
FvH4_3g25760 Fragaria vesca HOM05D001910 ORTHO05D008236 9.8e-21 104.0 71 73.2
FAN11G0824 Fragaria x ananassa HOM05D001910 ORTHO05D008236 9.8e-21 104.0 71 73.2
SGA_v2.0_scaffold1G00713 Striga asiatica HOM05D001910 ORTHO05D008236 1.3e-20 103.6 70 75.7
SGA_v2.0_scaffold467G52032 Striga asiatica HOM05D001910 ORTHO05D008236 1.3e-20 103.6 70 75.7
CANSAT01G2429 Cannabis sativa HOM05D001910 ORTHO05D008236 1.7e-20 103.2 71 73.2
Cpa.g.sc8.177 Carica papaya HOM05D001910 ORTHO05D008236 2.9e-20 102.4 71 71.8
SMO367G1217 Selaginella moellendorffii HOM05D001910 ORTHO05D008236 2.9e-20 102.4 68 72.1
MSTRG.21434 Avicennia marina HOM05D001910 ORTHO05D008236 3.7e-20 102.1 70 71.4
CARHR101060 Cardamine hirsuta HOM05D001910 ORTHO05D008236 3.7e-20 102.1 71 71.8
AT3G24730 Arabidopsis thaliana HOM05D001910 ORTHO05D008236 4.9e-20 101.7 71 70.4
Glyma.20G189700 Glycine max HOM05D001910 ORTHO05D008236 4.9e-20 101.7 71 74.6
BcaC01g03256 Brassica carinata HOM05D001910 ORTHO05D008236 6.4e-20 101.3 73 71.2
BolC3t17713H Brassica oleracea HOM05D001910 ORTHO05D008236 6.4e-20 101.3 73 71.2
Migut.D00518 Erythranthe guttata HOM05D001910 ORTHO05D008236 6.4e-20 101.3 70 72.9
BraA03t13522Z Brassica rapa HOM05D001910 ORTHO05D008236 8.3e-20 100.9 73 71.2
FAN25G3251 Fragaria x ananassa HOM05D001910 ORTHO05D008236 1.4e-19 100.1 71 73.2
Sc05g0002380 Simmondsia chinensis HOM05D001910 ORTHO05D008236 1.4e-19 100.1 68 76.5
BcaB03g14567 Brassica carinata HOM05D001910 ORTHO05D008236 1.9e-19 99.8 73 69.9
CBR_g52407 Chara braunii HOM05D001910 ORTHO05D008236 1.9e-19 99.8 71 69.0
DCAR_012631 Daucus carota HOM05D001910 ORTHO05D008236 2.4e-19 99.4 71 70.4
FAN16G2655 Fragaria x ananassa HOM05D001910 ORTHO05D008236 4.1e-19 98.6 100 56.0
Thhalv10002702m.g Eutrema salsugineum HOM05D001910 ORTHO05D008236 5.4e-19 98.2 69 75.4
SalBow4G2176 Salvia bowleyana HOM05D001910 ORTHO05D008236 5.4e-19 98.2 70 70.0
ClCG09G009170 Citrullus lanatus HOM05D001910 ORTHO05D008236 7.0e-19 97.8 65 76.9
unitig_8.g3604 Utricularia gibba HOM05D001910 ORTHO05D008236 7.0e-19 97.8 70 65.7
Zm00001eb327680 Zea mays HOM05D001910 ORTHO05D008236 7.0e-19 97.8 73 69.9
Os11g0297900 Oryza sativa ssp. japonica HOM05D001910 ORTHO05D008236 1.2e-18 97.1 73 67.1
AagrBONN_evm.TU.Sc2ySwM_117.2466 Anthoceros agrestis HOM05D001910 ORTHO05D008236 2.1e-18 96.3 71 69.0
Mapoly0023s0044 Marchantia polymorpha HOM05D001910 ORTHO05D008236 2.1e-18 96.3 71 71.8
HPP92_008933 Vanilla planifolia HOM05D001910 ORTHO05D008236 4.6e-18 95.1 74 62.2
Phvul.007G144300 Phaseolus vulgaris HOM05D001910 ORTHO05D008236 2.3e-17 92.8 71 70.4
VMungo0720G1587 Vigna mungo HOM05D001910 ORTHO05D008236 2.5e-16 89.4 60 75.0
Pp3c22_7790 Physcomitrium patens HOM05D001910 ORTHO05D008236 3.3e-16 89.0 71 62.0
Aa31LG8G7820 Aethionema arabicum HOM05D001910 ORTHO05D008236 5.2e-14 81.6 71 62.0
TWI36G0271 Tripterygium wilfordii HOM05D001910 ORTHO05D008236 8.6e-09 64.3 70 55.7
QL07p034638 Quercus lobata HOM05D001910 ORTHO05D008236 4.7e-07 58.5 107 45.8


User provided reference genes

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