Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 5.5e-308 1060.1 511 100.0
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.9e-247 859.0 510 79.8
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 4.2e-247 857.8 509 80.0
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.2e-246 856.3 511 79.3
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 7.8e-246 853.6 511 78.9
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 1.3e-245 852.8 509 79.0
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 1.7e-245 852.4 492 81.9
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 1.7e-245 852.4 506 81.8
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 5.1e-245 850.9 506 82.0
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 2.5e-244 848.6 502 79.7
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 9.6e-244 846.7 511 78.5
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 8.1e-243 843.6 509 78.2
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 3.8e-240 834.7 508 80.1
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 2.4e-239 832.0 513 78.6
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 3.2e-239 831.6 513 78.6
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 9.3e-239 830.1 513 78.4
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 9.3e-239 830.1 513 78.4
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 2.7e-238 828.6 509 77.2
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 1.0e-237 826.6 507 78.7
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 3.9e-237 824.7 504 76.6
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.5e-236 822.8 514 77.8
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 1.9e-236 822.4 512 77.0
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 3.3e-236 821.6 501 78.2
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 4.3e-236 821.2 525 76.8
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 9.0e-234 813.5 503 77.3
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 1.2e-233 813.1 514 77.0
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 2.6e-233 812.0 510 75.9
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 2.2e-232 808.9 496 79.2
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 4.9e-232 807.7 508 77.6
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 9.3e-231 803.5 511 75.9
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 9.3e-231 803.5 493 78.3
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 2.1e-230 802.4 517 74.5
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 6.0e-230 800.8 506 74.1
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 6.0e-230 800.8 502 74.5
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 7.9e-230 800.4 489 79.1
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 1.0e-229 800.0 506 73.5
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 1.3e-229 799.7 510 75.3
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 6.7e-229 797.3 503 75.7
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 8.7e-229 797.0 510 75.3
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 3.3e-228 795.0 507 72.8
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 4.3e-228 794.7 543 72.0
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 5.6e-228 794.3 511 75.3
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 2.4e-226 788.9 515 74.2
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 3.1e-226 788.5 513 74.7
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 5.3e-226 787.7 489 75.1
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 1.2e-225 786.6 507 72.4
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 2.0e-225 785.8 489 74.4
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 1.3e-224 783.1 491 76.0
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 1.7e-224 782.7 519 73.2
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 3.8e-224 781.6 481 77.5
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 4.9e-224 781.2 497 73.4
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 4.9e-224 781.2 503 75.1
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 5.5e-223 777.7 490 73.5
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 5.5e-223 777.7 511 73.6
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 5.5e-223 777.7 501 74.9
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 5.5e-223 777.7 512 72.7
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 7.1e-223 777.3 490 73.5
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 7.1e-223 777.3 508 74.4
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 2.7e-222 775.4 504 72.0
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 3.5e-222 775.0 506 75.7
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 1.3e-221 773.1 495 74.5
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 1.3e-221 773.1 495 74.5
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 1.3e-221 773.1 570 67.0
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 1.1e-220 770.0 503 72.6
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 1.5e-220 769.6 511 74.2
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 1.9e-220 769.2 517 72.7
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 4.3e-220 768.1 507 72.8
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 5.7e-220 767.7 516 72.1
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 7.4e-220 767.3 489 73.0
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 7.4e-220 767.3 514 71.4
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 3.7e-219 765.0 514 71.8
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 6.3e-219 764.2 489 72.8
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 6.3e-219 764.2 489 72.8
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 7.6e-217 757.3 491 73.3
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 2.9e-216 755.4 490 73.3
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 6.1e-214 747.7 518 70.7
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 1.8e-213 746.1 515 70.1
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 1.3e-211 740.0 501 71.3
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 3.4e-209 731.9 502 70.3
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 1.7e-208 729.6 521 69.1
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 8.5e-208 727.2 510 67.5
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 8.5e-208 727.2 525 68.6
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 1.4e-207 726.5 515 68.7
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 3.6e-206 721.8 510 66.7
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 3.0e-205 718.8 515 67.6
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 1.3e-203 713.4 451 74.5
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 1.7e-200 703.0 499 69.1
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 6.7e-197 691.0 518 65.3
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 2.0e-193 679.5 492 67.7
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 4.2e-191 671.8 441 73.5
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 1.3e-187 660.2 501 65.5
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 2.8e-187 659.1 496 64.7
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 1.5e-183 646.7 502 66.1
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 3.0e-181 639.0 502 62.5
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 8.8e-181 637.5 433 70.0
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 9.8e-180 634.0 483 63.4
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 1.1e-178 630.6 513 60.2
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 7.0e-178 627.9 495 63.0
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 9.1e-178 627.5 354 81.9
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 3.2e-175 619.0 486 61.3
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 1.2e-166 590.5 419 68.0
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 1.0e-165 587.4 406 70.4
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 6.0e-121 438.7 258 78.7
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 5.6e-119 432.2 420 50.2
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 1.3e-118 431.0 451 49.4
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 1.2e-116 424.5 418 50.5
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 5.8e-116 422.2 345 56.8
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 1.3e-110 404.4 423 46.3
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 2.5e-74 283.9 174 77.0
Oeu061560.1 Olea europaea HOM05D006476 ORTHO05D008178 2.0e-68 264.2 162 71.6
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 4.9e-54 216.5 120 85.8
MD04G1164300 Malus domestica HOM05D006476 ORTHO05D008178 7.3e-42 176.0 112 75.0
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 3.9e-35 153.7 132 57.6
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 2.8e-33 147.5 310 31.6
ATR0810G038 Amborella trichopoda HOM05D006476 ORTHO05D008178 4.0e-24 117.1 84 63.1
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 4.4e-15 87.0 57 68.4
BcaNung03295 Brassica carinata HOM05D006476 ORTHO05D008178 9.3e-13 79.3 75 48.0
C09p74660 Brassica napus HOM05D000872 ORTHO05D000777 9.3e-13 79.3 75 48.0
BolC9t60200H Brassica oleracea HOM05D006476 ORTHO05D008178 9.3e-13 79.3 75 48.0
Cre17.g727100 Chlamydomonas reinhardtii HOM05D006476 ORTHO05D008178 2.8e-09 67.8 71 39.4
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 9.0e-08 62.8 58 37.9
PRCOL_00007100 Prasinoderma coloniale HOM05D006476 ORTHO05D008178 1.3e-06 58.9 99 30.3
Oeu056790.1 Olea europaea HOM05D006476 ORTHO05D292299 4.9e-06 57.0 38 68.4


User provided reference genes

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