Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p033728 Quercus lobata HOM05D001228 ORTHO05D003869 6.1e-91 337.4 166 100.0
CiPaw.10G161500 Carya illinoinensis HOM05D001228 ORTHO05D003869 4.8e-35 151.8 155 54.8
Haze_21094 Corylus avellana HOM05D001228 ORTHO05D003869 2.2e-32 142.9 160 51.9
Cfa017105 Carpinus fangiana HOM05D001228 ORTHO05D003869 1.2e-30 137.1 161 52.2
Lj2A66T65 Lonicera japonica HOM05D001228 ORTHO05D003869 1.9e-28 129.8 141 53.9
TAR623G1791 Trochodendron aralioides HOM05D001228 ORTHO05D003869 3.3e-28 129.0 158 48.7
Prupe.6G285900 Prunus persica HOM05D001228 ORTHO05D003869 5.7e-28 128.3 157 49.0
COL.COLO4_14441 Corchorus olitorius HOM05D001228 ORTHO05D003869 1.3e-27 127.1 160 47.5
Ciclev10012823m.g Citrus clementina HOM05D001228 ORTHO05D003869 1.6e-27 126.7 135 49.6
Phvul.008G090400 Phaseolus vulgaris HOM05D001228 ORTHO05D003869 2.1e-27 126.3 160 46.9
Peaxi162Scf00264g00838 Petunia axillaris HOM05D001228 ORTHO05D003869 1.1e-26 124.0 152 47.4
vmacro08917 Vaccinium macrocarpon HOM05D001228 ORTHO05D003869 1.1e-26 124.0 141 48.2
GSVIVG01030259001 Vitis vinifera HOM05D001228 ORTHO05D003869 1.1e-26 124.0 159 44.0
MD04G1167600 Malus domestica HOM05D001228 ORTHO05D003869 1.4e-26 123.6 168 46.4
TWI77G0871 Tripterygium wilfordii HOM05D001228 ORTHO05D003869 4.0e-26 122.1 150 45.3
Atru.chr8.2349 Acer truncatum HOM05D001228 ORTHO05D003869 9.0e-26 120.9 146 46.6
Actinidia11545 Actinidia chinensis HOM05D001228 ORTHO05D003869 1.2e-25 120.6 141 49.6
Rhsim04G0124100 Rhododendron simsii HOM05D001228 ORTHO05D003869 1.5e-25 120.2 136 47.8
TWI74G0137 Tripterygium wilfordii HOM05D001228 ORTHO05D003869 2.6e-25 119.4 153 45.1
Actinidia32547 Actinidia chinensis HOM05D001228 ORTHO05D003869 3.4e-25 119.0 117 54.7
QL07p033687 Quercus lobata HOM05D001228 ORTHO05D003869 3.4e-25 119.0 171 46.8
MELO3C009126.2 Cucumis melo HOM05D001228 ORTHO05D003869 4.5e-25 118.6 142 46.5
ClCG10G022510 Citrullus lanatus HOM05D001228 ORTHO05D003869 5.8e-25 118.2 158 44.3
RcHm_v2.0_Chr3g0461491 Rosa chinensis HOM05D001228 ORTHO05D003869 5.8e-25 118.2 171 43.9
Potri.016G128200 Populus trichocarpa HOM05D001228 ORTHO05D003869 7.6e-25 117.9 159 44.0
Aqoxy4G02713 Aquilegia oxysepala HOM05D001228 ORTHO05D003869 1.0e-24 117.5 139 48.9
CANSAT35G0968 Cannabis sativa HOM05D001228 ORTHO05D003869 1.3e-24 117.1 151 46.4
Duzib128G1021 Durio zibethinus HOM05D001228 ORTHO05D003869 1.7e-24 116.7 151 45.0
Oeu057642.1 Olea europaea HOM05D001228 ORTHO05D003869 1.7e-24 116.7 154 43.5
Medtr7g071110 Medicago truncatula HOM05D001228 ORTHO05D003869 2.2e-24 116.3 160 43.8
Manes.09G112600 Manihot esculenta HOM05D001228 ORTHO05D003869 3.8e-24 115.5 160 41.2
Psat3g123520 Pisum sativum HOM05D001228 ORTHO05D003869 5.0e-24 115.2 158 44.3
Glyma.18G208700 Glycine max HOM05D001228 ORTHO05D003869 6.5e-24 114.8 160 43.1
Oeu026970.1 Olea europaea HOM05D001228 ORTHO05D003869 6.5e-24 114.8 138 46.4
Thecc.05G005700 Theobroma cacao HOM05D001228 ORTHO05D003869 6.5e-24 114.8 159 44.0
Solyc10g076300.2 Solanum lycopersicum HOM05D001228 ORTHO05D003869 8.4e-24 114.4 140 47.9
CsaV3_3G033340 Cucumis sativus L. HOM05D001228 ORTHO05D003869 1.1e-23 114.0 140 44.3
Lalb_Chr12g0207431 Lupinus albus HOM05D001228 ORTHO05D003869 1.1e-23 114.0 139 46.0
MD12G1180900 Malus domestica HOM05D001228 ORTHO05D003869 1.1e-23 114.0 168 44.6
Sopen10g027920 Solanum pennellii HOM05D001228 ORTHO05D003869 1.1e-23 114.0 140 47.9
VMungo1383G0475 Vigna mungo HOM05D001228 ORTHO05D003869 1.1e-23 114.0 160 42.5
Nitab4.5_0003850g0040 Nicotiana tabacum HOM05D001228 ORTHO05D003869 1.9e-23 113.2 154 44.2
PGR031G3439 Punica granatum HOM05D001228 ORTHO05D003869 1.9e-23 113.2 141 45.4
PGSC0003DMG400011859 Solanum tuberosum HOM05D001228 ORTHO05D003869 1.9e-23 113.2 140 47.9
MSTRG.5536 Avicennia marina HOM05D001228 ORTHO05D003869 2.5e-23 112.8 159 41.5
Sabra16G0130200 Salix brachista HOM05D001228 ORTHO05D003869 5.5e-23 111.7 156 42.3
TPR.G18651 Trifolium pratense HOM05D001228 ORTHO05D003869 5.5e-23 111.7 158 43.0
FAN02G1495 Fragaria x ananassa HOM05D001228 ORTHO05D003869 1.6e-22 110.2 175 41.1
Hma1.2p1_0479F.1_g161710 Hydrangea macrophylla HOM05D001228 ORTHO05D003869 1.6e-22 110.2 119 52.1
CSS0036405 Camellia sinensis var. sinensis HOM05D001228 ORTHO05D003869 2.1e-22 109.8 154 42.9
MBI15_g01645_MAGBIO Magnolia biondii HOM05D001228 ORTHO05D003869 2.1e-22 109.8 151 45.0
Cpa.g.sc5.247 Carica papaya HOM05D001228 ORTHO05D003869 2.7e-22 109.4 134 47.8
Lj3A945G16 Lonicera japonica HOM05D001228 ORTHO05D003869 4.6e-22 108.6 141 46.8
CSS0038681 Camellia sinensis var. sinensis HOM05D001228 ORTHO05D003869 6.1e-22 108.2 154 42.2
Ca_07712_v3 Cicer arietinum L. HOM05D001228 ORTHO05D003869 6.1e-22 108.2 158 44.3
Lj1g0006910 Lotus japonicus HOM05D001228 ORTHO05D003869 7.9e-22 107.8 149 43.6
Duzib093G0175 Durio zibethinus HOM05D001228 ORTHO05D003869 1.3e-21 107.1 159 45.9
Glyma.09G280300 Glycine max HOM05D001228 ORTHO05D003869 1.3e-21 107.1 159 44.7
Nn2g13279 Nelumbo nucifera HOM05D001228 ORTHO05D003869 1.8e-21 106.7 159 41.5
SGA_v2.0_scaffold240G44063 Striga asiatica HOM05D001228 ORTHO05D003869 1.8e-21 106.7 159 42.1
Eucgr.K02941 Eucalyptus grandis HOM05D001228 ORTHO05D003869 2.3e-21 106.3 156 37.8
Haze_21096 Corylus avellana HOM05D001228 ORTHO05D003869 3.0e-21 105.9 152 46.1
Solyc09g014993.1 Solanum lycopersicum HOM05D001228 ORTHO05D003869 3.0e-21 105.9 162 40.1
Thecc.05G005800 Theobroma cacao HOM05D001228 ORTHO05D003869 5.1e-21 105.1 163 44.2
PGR102G2509 Punica granatum HOM05D001228 ORTHO05D003869 6.7e-21 104.8 161 41.6
Gorai.002G266800 Gossypium raimondii HOM05D001228 ORTHO05D003869 8.7e-21 104.4 142 43.7
Lalb_Chr19g0124121 Lupinus albus HOM05D001228 ORTHO05D003869 8.7e-21 104.4 159 40.3
Lj3g0022456 Lotus japonicus HOM05D001228 ORTHO05D003869 1.1e-20 104.0 117 49.6
PSO339G6233 Papaver somniferum HOM05D001228 ORTHO05D003869 1.1e-20 104.0 137 45.3
DCAR_018663 Daucus carota HOM05D001228 ORTHO05D003869 1.5e-20 103.6 163 38.7
Sopen09g007980 Solanum pennellii HOM05D001228 ORTHO05D003869 1.5e-20 103.6 162 40.7
PGSC0003DMG400011620 Solanum tuberosum HOM05D001228 ORTHO05D003869 1.9e-20 103.2 155 41.3
Lalb_Chr01g0023441 Lupinus albus HOM05D001228 ORTHO05D003869 2.5e-20 102.8 162 40.7
FvH4_6g10520 Fragaria vesca HOM05D001228 ORTHO05D003869 3.3e-20 102.4 124 46.0
FAN14G4900 Fragaria x ananassa HOM05D001228 ORTHO05D003869 3.3e-20 102.4 124 46.0
PSO384G2232 Papaver somniferum HOM05D001228 ORTHO05D003869 3.3e-20 102.4 137 44.5
Gohir.D01G220101 Gossypium hirsutum HOM05D001228 ORTHO05D003869 4.3e-20 102.1 142 43.7
Eucgr.A00628 Eucalyptus grandis HOM05D001228 ORTHO05D003869 5.7e-20 101.7 156 38.5
Gohir.A01G230132 Gossypium hirsutum HOM05D001228 ORTHO05D003869 7.4e-20 101.3 142 43.0
Prupe.6G285800 Prunus persica HOM05D001228 ORTHO05D003869 7.4e-20 101.3 157 41.4
Phvul.010G062800 Phaseolus vulgaris HOM05D001228 ORTHO05D003869 1.6e-19 100.1 142 40.8
FAN05G0078 Fragaria x ananassa HOM05D001228 ORTHO05D003869 2.8e-19 99.4 124 44.4
FAN05G2526 Fragaria x ananassa HOM05D001228 ORTHO05D003869 2.8e-19 99.4 124 44.4
FAN09G3644 Fragaria x ananassa HOM05D001228 ORTHO05D003869 2.8e-19 99.4 124 44.4
Rhsim04G0124200 Rhododendron simsii HOM05D001228 ORTHO05D003869 2.8e-19 99.4 158 41.1
Sed0022013 Sechium edule HOM05D001228 ORTHO05D003869 2.8e-19 99.4 123 43.9
Psat7g249480 Pisum sativum HOM05D001228 ORTHO05D003869 1.1e-18 97.4 117 42.7
SHI12886 Sapria himalayana HOM05D001228 ORTHO05D003869 1.1e-18 97.4 145 41.4
Lalb_Chr12g0207401 Lupinus albus HOM05D001228 ORTHO05D003869 1.4e-18 97.1 144 43.8
Cc00_g13880 Coffea canephora HOM05D001228 ORTHO05D003869 1.8e-18 96.7 151 43.0
Glyma.01G128000 Glycine max HOM05D001228 ORTHO05D003869 1.8e-18 96.7 131 41.2
HanXRQChr16g0509781 Helianthus annuus HOM05D001228 ORTHO05D003869 1.8e-18 96.7 117 44.4
Gohir.A04G095900 Gossypium hirsutum HOM05D001228 ORTHO05D003869 3.1e-18 95.9 158 40.5
ATR0594G080 Amborella trichopoda HOM05D001228 ORTHO05D003869 4.1e-18 95.5 161 36.6
unitig_27.g24875 Utricularia gibba HOM05D001228 ORTHO05D003869 4.1e-18 95.5 140 42.1
ECA236G4070 Erigeron canadensis HOM05D001410 ORTHO05D003969 5.3e-18 95.1 154 39.0
vmacro20331 Vaccinium macrocarpon HOM05D001228 ORTHO05D003869 5.3e-18 95.1 168 38.7
CiPaw.10G161400 Carya illinoinensis HOM05D001228 ORTHO05D003869 6.9e-18 94.7 168 39.3
Gorai.012G119500 Gossypium raimondii HOM05D001228 ORTHO05D003869 9.0e-18 94.4 158 39.9
TPR.G5191 Trifolium pratense HOM05D001228 ORTHO05D003869 9.0e-18 94.4 124 40.3
SGA_v2.0_scaffold110G31183 Striga asiatica HOM05D001228 ORTHO05D003869 1.2e-17 94.0 141 39.7
Actinidia20773 Actinidia chinensis HOM05D001228 ORTHO05D003869 1.5e-17 93.6 131 48.1
Lsat_1_v5_gn_8_103660 Lactuca sativa HOM05D001228 ORTHO05D003869 1.5e-17 93.6 117 45.3
Cfa017104 Carpinus fangiana HOM05D001228 ORTHO05D003869 2.0e-17 93.2 156 41.7
Gohir.D04G135700 Gossypium hirsutum HOM05D001228 ORTHO05D003869 2.0e-17 93.2 158 39.9
SalBow4G1866 Salvia bowleyana HOM05D001228 ORTHO05D003869 2.0e-17 93.2 139 39.6
Hund03804 Selenicereus undatus HOM05D001228 ORTHO05D003869 2.6e-17 92.8 146 38.4
DCAR_023992 Daucus carota HOM05D001228 ORTHO05D003869 4.5e-17 92.0 158 38.0
Nitab4.5_0000355g0220 Nicotiana tabacum HOM05D001228 ORTHO05D003869 1.0e-16 90.9 140 40.0
PSO017G0146 Papaver somniferum HOM05D001228 ORTHO05D003869 1.7e-16 90.1 119 44.5
PSO349G0256 Papaver somniferum HOM05D001228 ORTHO05D003869 2.2e-16 89.7 128 42.2
Medtr4g013270 Medicago truncatula HOM05D001228 ORTHO05D003869 1.1e-15 87.4 129 37.2
Dinv35419 Davidia involucrata HOM05D001228 ORTHO05D003869 1.4e-15 87.0 179 36.9
MSTRG.18970 Avicennia marina HOM05D001228 ORTHO05D003869 1.9e-15 86.7 140 38.6
Haze_21095 Corylus avellana HOM05D001228 ORTHO05D003869 2.5e-15 86.3 180 40.0
arahy.Tifrunner.gnm1.ann1.998PHG Arachis hypogaea HOM05D001228 ORTHO05D003869 3.2e-15 85.9 155 38.7
arahy.Tifrunner.gnm1.ann1.PP06PB Arachis hypogaea HOM05D001228 ORTHO05D003869 3.2e-15 85.9 155 38.7
CDE06G0538 Ceratophyllum demersum HOM05D002215 ORTHO05D002238 4.2e-15 85.5 166 33.7
DCAR_028890 Daucus carota HOM05D001228 ORTHO05D003869 4.2e-15 85.5 135 41.5
DCAR_028892 Daucus carota HOM05D001228 ORTHO05D003869 4.2e-15 85.5 135 41.5
THA.LOC104823359 Tarenaya hassleriana HOM05D001228 ORTHO05D003869 4.2e-15 85.5 140 40.7
Ah.08g209980 Amaranthus hybridus HOM05D001228 ORTHO05D003869 9.4e-15 84.3 146 37.0
Hma1.2p1_0501F.1_g167290 Hydrangea macrophylla HOM05D001228 ORTHO05D003869 9.4e-15 84.3 58 65.5
arahy.Tifrunner.gnm1.ann1.P8LEZG Arachis hypogaea HOM05D001228 ORTHO05D003869 1.6e-14 83.6 117 41.0
Nitab4.5_0000047g0150 Nicotiana tabacum HOM05D001228 ORTHO05D003869 4.6e-14 82.0 141 36.9
Nitab4.5_0001226g0040 Nicotiana tabacum HOM05D001228 ORTHO05D003869 6.1e-14 81.6 141 36.9
Sc19g0002630 Simmondsia chinensis HOM05D001228 ORTHO05D003869 1.4e-13 80.5 145 37.2
unitig_699.g19375 Utricularia gibba HOM05D001228 ORTHO05D003869 1.4e-13 80.5 160 38.1
Sp4g20810 Schrenkiella parvula HOM05D001228 ORTHO05D003869 1.8e-13 80.1 150 40.0
BcaB06g29055 Brassica carinata HOM05D001228 ORTHO05D003869 3.0e-13 79.3 147 38.8
AL4G35760 Arabidopsis lyrata HOM05D001228 ORTHO05D003869 3.9e-13 79.0 120 40.8
CARHR133170 Cardamine hirsuta HOM05D001228 ORTHO05D003869 3.9e-13 79.0 136 39.7
Thhalv10017282m.g Eutrema salsugineum HOM05D001228 ORTHO05D003869 3.9e-13 79.0 158 37.3
arahy.Tifrunner.gnm1.ann1.22MEII Arachis hypogaea HOM05D001228 ORTHO05D003869 5.1e-13 78.6 135 35.6
C04p66720 Brassica napus HOM05D001228 ORTHO05D003869 5.1e-13 78.6 119 42.0
BolC4t28174H Brassica oleracea HOM05D001228 ORTHO05D003869 5.1e-13 78.6 119 42.0
Glyma.03G042800 Glycine max HOM05D001228 ORTHO05D003869 6.7e-13 78.2 136 37.5
AT2G38480 Arabidopsis thaliana HOM05D001228 ORTHO05D003869 1.1e-12 77.4 120 40.8
Cfa021148 Carpinus fangiana HOM05D001228 ORTHO05D003869 1.1e-12 77.4 107 43.0
PSO017G2842 Papaver somniferum HOM05D001228 ORTHO05D003869 1.5e-12 77.0 143 37.8
HPP92_001132 Vanilla planifolia HOM05D001228 ORTHO05D003869 1.5e-12 77.0 139 35.3
A04p29430 Brassica napus HOM05D001228 ORTHO05D003869 2.0e-12 76.6 119 41.2
BraA04t18410Z Brassica rapa HOM05D001228 ORTHO05D003869 2.0e-12 76.6 119 41.2
PSO349G0320 Papaver somniferum HOM05D001228 ORTHO05D003869 3.3e-12 75.9 106 43.4
A03p21340 Brassica napus HOM05D001228 ORTHO05D003869 4.3e-12 75.5 119 40.3
BraA03t11369Z Brassica rapa HOM05D001228 ORTHO05D003869 4.3e-12 75.5 119 40.3
Carub.0004s2046 Capsella rubella HOM05D001228 ORTHO05D003869 4.3e-12 75.5 158 36.7
Dinv12182 Davidia involucrata HOM05D001228 ORTHO05D003869 4.3e-12 75.5 117 40.2
Migut.O00918 Erythranthe guttata HOM05D001228 ORTHO05D003869 7.4e-12 74.7 58 56.9
Lj3g0017137 Lotus japonicus HOM05D001228 ORTHO05D003869 9.7e-12 74.3 125 39.2
BcaB01g03681 Brassica carinata HOM05D001228 ORTHO05D003869 1.3e-11 73.9 148 34.5
CsaV3_4G026670 Cucumis sativus L. HOM05D001228 ORTHO05D003869 1.7e-11 73.6 147 31.3
Os03g0817100 Oryza sativa ssp. japonica HOM05D001228 ORTHO05D003869 1.7e-11 73.6 121 35.5
MELO3C033444.2 Cucumis melo HOM05D001228 ORTHO05D003869 2.2e-11 73.2 140 35.7
Phvul.010G062600 Phaseolus vulgaris HOM05D001228 ORTHO05D003869 2.8e-11 72.8 111 37.8
Aa31LG5G23870 Aethionema arabicum HOM05D001228 ORTHO05D003869 3.7e-11 72.4 163 35.0
BcaC02g07463 Brassica carinata HOM05D001228 ORTHO05D003869 3.7e-11 72.4 119 41.2
COL.COLO4_30298 Corchorus olitorius HOM05D001228 ORTHO05D003869 6.3e-11 71.6 155 32.3
Aa31sc114G80 Aethionema arabicum HOM05D001228 ORTHO05D003869 1.8e-10 70.1 119 38.7
PSO017G2556 Papaver somniferum HOM05D001228 ORTHO05D003869 3.1e-10 69.3 121 40.5
Zm00001eb286320 Zea mays HOM05D001228 ORTHO05D003869 4.1e-10 68.9 119 32.8
PSO017G6895 Papaver somniferum HOM05D001228 ORTHO05D003869 5.3e-10 68.6 106 43.4
COL.COLO4_30301 Corchorus olitorius HOM05D002465 ORTHO05D005308 6.9e-10 68.2 135 37.0
Os03g0298300 Oryza sativa ssp. japonica HOM05D001228 ORTHO05D003869 9.1e-10 67.8 118 33.9
Os05g0344400 Oryza sativa ssp. japonica HOM05D001228 ORTHO05D003869 9.1e-10 67.8 119 34.5
BcaC01g05535 Brassica carinata HOM05D001228 ORTHO05D003869 1.2e-09 67.4 115 36.5
PSO017G5250 Papaver somniferum HOM05D001228 ORTHO05D003869 1.5e-09 67.0 108 41.7
Zm00001eb212010 Zea mays HOM05D001228 ORTHO05D003869 1.5e-09 67.0 119 33.6
BcaC02g07462 Brassica carinata HOM05D001228 ORTHO05D003869 2.0e-09 66.6 90 45.6
Peaxi162Scf00744g00227 Petunia axillaris HOM05D001228 ORTHO05D003869 1.7e-08 63.5 158 36.1
TPR.G29222 Trifolium pratense HOM05D001228 ORTHO05D003869 2.9e-08 62.8 58 46.6
Zm00001eb191470 Zea mays HOM05D000431 ORTHO05D003869 3.8e-08 62.4 128 31.2
PSO349G0235 Papaver somniferum HOM05D001228 ORTHO05D003869 1.4e-07 60.5 120 32.5
SEGI_30233 Sequoiadendron giganteum HOM05D001228 ORTHO05D003869 1.9e-07 60.1 148 30.4
Dinv35061 Davidia involucrata HOM05D001228 ORTHO05D002377 1.6e-06 57.0 128 27.3
Migut.L02054 Erythranthe guttata HOM05D001228 ORTHO05D003869 2.1e-06 56.6 46 56.5
MBI10_g10243_MAGBIO Magnolia biondii HOM05D001228 ORTHO05D002377 2.1e-06 56.6 121 29.8
Migut.O00963 Erythranthe guttata HOM05D001228 ORTHO05D003869 2.7e-06 56.2 100 40.0
Oeu062985.2 Olea europaea HOM05D001228 ORTHO05D002377 2.7e-06 56.2 124 30.6
MSTRG.3170 Avicennia marina HOM05D001228 ORTHO05D002377 3.6e-06 55.8 124 29.0
Gohir.A01G230250 Gossypium hirsutum HOM05D001228 ORTHO05D003869 3.6e-06 55.8 57 42.1
PSO017G5735 Papaver somniferum HOM05D001228 ORTHO05D003869 7.9e-06 54.7 117 34.2
SalBow1G4179 Salvia bowleyana HOM05D001228 ORTHO05D002377 7.9e-06 54.7 127 26.8


User provided reference genes

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