Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p032522 Quercus lobata HOM05D006727 ORTHO05D008408 3.5e-126 454.9 220 100.0
Dinv11373 Davidia involucrata HOM05D006727 ORTHO05D008408 1.2e-107 393.3 221 84.6
Cfa017053 Carpinus fangiana HOM05D006727 ORTHO05D008408 2.1e-107 392.5 221 85.5
Prupe.6G291700 Prunus persica HOM05D006727 ORTHO05D008408 1.8e-106 389.4 219 84.5
Dinv25328 Davidia involucrata HOM05D006727 ORTHO05D008408 6.8e-106 387.5 210 88.1
Manes.09G116800 Manihot esculenta HOM05D006727 ORTHO05D008408 6.8e-106 387.5 211 85.3
CiPaw.09G219900 Carya illinoinensis HOM05D006727 ORTHO05D008408 2.9e-104 382.1 219 83.6
Gorai.011G128700 Gossypium raimondii HOM05D006727 ORTHO05D008408 3.8e-104 381.7 211 83.9
Thecc.04G153700 Theobroma cacao HOM05D006727 ORTHO05D008408 3.8e-104 381.7 211 83.9
Gohir.A10G149900 Gossypium hirsutum HOM05D006727 ORTHO05D008408 1.1e-103 380.2 211 83.4
MD12G1186200 Malus domestica HOM05D006727 ORTHO05D008408 1.1e-103 380.2 211 84.8
Gohir.D10G116900 Gossypium hirsutum HOM05D006727 ORTHO05D008408 1.9e-103 379.4 211 83.4
CSS0002185 Camellia sinensis var. sinensis HOM05D006727 ORTHO05D008408 2.4e-103 379.0 217 84.8
TWI53G1665 Tripterygium wilfordii HOM05D006727 ORTHO05D008408 2.4e-103 379.0 219 81.7
Duzib212G0227 Durio zibethinus HOM05D006727 ORTHO05D008408 4.2e-103 378.3 211 83.9
FAN14G1566 Fragaria x ananassa HOM05D006727 ORTHO05D008408 1.2e-102 376.7 211 83.9
RcHm_v2.0_Chr3g0460801 Rosa chinensis HOM05D006727 ORTHO05D008408 1.2e-102 376.7 219 81.3
GSVIVG01030200001 Vitis vinifera HOM05D006727 ORTHO05D008408 1.2e-102 376.7 215 81.9
CSS0012941 Camellia sinensis var. sinensis HOM05D006727 ORTHO05D008408 1.6e-102 376.3 217 83.9
TAR220G0001 Trochodendron aralioides HOM05D006727 ORTHO05D008408 1.6e-102 376.3 199 86.4
MD04G1172900 Malus domestica HOM05D006727 ORTHO05D008408 4.6e-102 374.8 212 83.0
COL.COLO4_16540 Corchorus olitorius HOM05D006727 ORTHO05D008408 6.0e-102 374.4 211 81.5
CsaV3_3G033190 Cucumis sativus L. HOM05D006727 ORTHO05D008408 1.3e-101 373.2 214 84.1
FvH4_6g10100 Fragaria vesca HOM05D006727 ORTHO05D008408 1.3e-101 373.2 211 83.4
FAN02G0358 Fragaria x ananassa HOM05D006727 ORTHO05D008408 1.3e-101 373.2 211 83.4
MELO3C009112.2 Cucumis melo HOM05D006727 ORTHO05D008408 2.3e-101 372.5 214 83.6
Potri.016G134700 Populus trichocarpa HOM05D006727 ORTHO05D008408 2.3e-101 372.5 210 81.4
Atru.chr8.2386 Acer truncatum HOM05D006727 ORTHO05D008408 3.0e-101 372.1 219 79.9
Aqoxy4G02378 Aquilegia oxysepala HOM05D006727 ORTHO05D008408 3.9e-101 371.7 222 79.7
Lalb_Chr19g0124021 Lupinus albus HOM05D006727 ORTHO05D008408 6.6e-101 370.9 214 80.8
PGR004G2541 Punica granatum HOM05D006727 ORTHO05D008408 6.6e-101 370.9 211 82.5
Hund03725 Selenicereus undatus HOM05D006727 ORTHO05D008408 6.6e-101 370.9 210 81.9
FAN05G1856 Fragaria x ananassa HOM05D006727 ORTHO05D008408 3.3e-100 368.6 211 82.5
CANSAT35G0523 Cannabis sativa HOM05D006727 ORTHO05D008408 2.1e-99 365.9 219 77.6
Sed0012883 Sechium edule HOM05D006727 ORTHO05D008408 2.8e-99 365.5 214 80.8
FAN05G4632 Fragaria x ananassa HOM05D006727 ORTHO05D008408 3.6e-99 365.2 211 82.0
THA.LOC104823356 Tarenaya hassleriana HOM05D006727 ORTHO05D008408 3.6e-99 365.2 211 79.1
HanXRQChr01g0000191 Helianthus annuus HOM05D006727 ORTHO05D008408 6.2e-99 364.4 211 82.9
Phvul.008G083900 Phaseolus vulgaris HOM05D006727 ORTHO05D008408 8.1e-99 364.0 214 80.4
arahy.Tifrunner.gnm1.ann1.SP3HKJ Arachis hypogaea HOM05D006727 ORTHO05D008408 1.1e-98 363.6 210 80.5
Glyma.18G215000 Glycine max HOM05D006727 ORTHO05D008408 1.1e-98 363.6 215 80.9
Lj1g0012647 Lotus japonicus HOM05D006727 ORTHO05D008408 1.1e-98 363.6 204 81.9
Rhsim05G0229700 Rhododendron simsii HOM05D006727 ORTHO05D008408 1.1e-98 363.6 211 82.5
arahy.Tifrunner.gnm1.ann1.U8U4T8 Arachis hypogaea HOM05D006727 ORTHO05D008408 1.4e-98 363.2 210 80.0
Sabra04G0152100 Salix brachista HOM05D006727 ORTHO05D008408 3.1e-98 362.1 231 74.0
Migut.J00054 Erythranthe guttata HOM05D006727 ORTHO05D008408 4.0e-98 361.7 214 79.0
Nitab4.5_0000950g0010 Nicotiana tabacum HOM05D006727 ORTHO05D008408 4.0e-98 361.7 211 79.1
Psat3g120440 Pisum sativum HOM05D006727 ORTHO05D008408 4.0e-98 361.7 213 79.8
PSO017G7044 Papaver somniferum HOM05D006727 ORTHO05D008408 9.0e-98 360.5 205 80.5
SGA_v2.0_scaffold373G50173 Striga asiatica HOM05D006727 ORTHO05D008408 1.2e-97 360.1 211 79.6
Medtr7g072680 Medicago truncatula HOM05D006727 ORTHO05D008408 2.6e-97 359.0 204 82.4
Sc19g0002650 Simmondsia chinensis HOM05D006727 ORTHO05D008408 2.6e-97 359.0 210 79.0
Peaxi162Scf00732g00434 Petunia axillaris HOM05D006727 ORTHO05D008408 5.8e-97 357.8 211 78.7
TPR.G26930 Trifolium pratense HOM05D006727 ORTHO05D008408 5.8e-97 357.8 211 78.7
Glyma.09G276200 Glycine max HOM05D006727 ORTHO05D008408 1.3e-96 356.7 216 79.2
Ciclev10012697m.g Citrus clementina HOM05D006727 ORTHO05D008408 1.7e-96 356.3 218 76.1
ECA248G2137 Erigeron canadensis HOM05D006727 ORTHO05D008408 1.7e-96 356.3 198 85.4
Lsat_1_v5_gn_5_150061 Lactuca sativa HOM05D006727 ORTHO05D008408 2.2e-96 355.9 215 80.0
Cc06_g00470 Coffea canephora HOM05D006727 ORTHO05D008408 8.4e-96 354.0 211 76.8
EL10Ac7g17073 Beta vulgaris HOM05D006727 ORTHO05D008408 2.4e-95 352.4 209 79.4
Zm00001eb281990 Zea mays HOM05D006727 ORTHO05D008408 3.2e-95 352.1 218 72.9
Eucgr.K01278 Eucalyptus grandis HOM05D006727 ORTHO05D008408 3.5e-94 348.6 211 76.8
Aa31sc296G30 Aethionema arabicum HOM05D006727 ORTHO05D008408 7.9e-94 347.4 218 75.7
MSTRG.18948 Avicennia marina HOM05D006727 ORTHO05D008408 3.0e-93 345.5 224 71.9
HPP92_001138 Vanilla planifolia HOM05D006727 ORTHO05D008408 3.9e-93 345.1 219 72.6
CARHR161200 Cardamine hirsuta HOM05D006727 ORTHO05D008408 7.4e-92 340.9 211 75.8
AT3G51610 Arabidopsis thaliana HOM05D006727 ORTHO05D008408 1.6e-91 339.7 200 78.0
Thhalv10010694m.g Eutrema salsugineum HOM05D006727 ORTHO05D008408 8.1e-91 337.4 210 75.7
BcaNung00375 Brassica carinata HOM05D006727 ORTHO05D008408 1.1e-90 337.0 210 75.7
AL5G32050 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 1.8e-90 336.3 205 76.1
C01p28960 Brassica napus HOM05D006727 ORTHO05D008408 3.1e-90 335.5 210 76.2
BcaC09g50100 Brassica carinata HOM05D006727 ORTHO05D008408 4.0e-90 335.1 210 76.2
BolC1t02827H Brassica oleracea HOM05D006727 ORTHO05D008408 4.0e-90 335.1 210 76.2
A01p23320 Brassica napus HOM05D006727 ORTHO05D008408 1.5e-89 333.2 213 75.6
BraA01t02241Z Brassica rapa HOM05D006727 ORTHO05D008408 1.5e-89 333.2 213 75.6
Haze_21159 Corylus avellana HOM05D006727 ORTHO05D008408 7.6e-89 330.9 177 87.0
Os05g0168400 Oryza sativa ssp. japonica HOM05D006727 ORTHO05D008408 1.7e-88 329.7 208 72.6
Carub.0005s1797 Capsella rubella HOM05D006727 ORTHO05D008408 2.9e-88 328.9 211 74.4
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 9.3e-87 323.9 215 68.8
vmacro20362 Vaccinium macrocarpon HOM05D006727 ORTHO05D008408 1.3e-85 320.1 215 73.5
PSO170G4157 Papaver somniferum HOM05D006727 ORTHO05D008408 9.6e-84 313.9 177 80.2
Oeu026955.4 Olea europaea HOM05D006727 ORTHO05D008408 2.1e-83 312.8 245 63.7
Nn2g10333 Nelumbo nucifera HOM05D006727 ORTHO05D008408 4.8e-83 311.6 177 80.2
CDE04G1801 Ceratophyllum demersum HOM05D006727 ORTHO05D008408 1.4e-82 310.1 182 76.9
Ah.15g090120 Amaranthus hybridus HOM05D006727 ORTHO05D008408 2.7e-78 295.8 215 68.8
Sp5g10660 Schrenkiella parvula HOM05D006727 ORTHO05D008408 2.3e-77 292.7 179 76.0
unitig_749.g14090 Utricularia gibba HOM05D006727 ORTHO05D008408 9.6e-76 287.3 184 70.7
TAR623G1271 Trochodendron aralioides HOM05D006727 ORTHO05D008408 6.5e-72 274.6 217 67.3
FAN09G3050 Fragaria x ananassa HOM05D006727 ORTHO05D008408 1.9e-71 273.1 158 80.4
CAN.G119.2 Capsicum annuum HOM05D006727 ORTHO05D008408 1.6e-70 270.0 151 78.8
ClCG10G022640 Citrullus lanatus HOM05D006727 ORTHO05D008408 1.9e-68 263.1 214 66.4
Mapoly0003s0079 Marchantia polymorpha HOM05D006727 ORTHO05D008408 2.5e-68 262.7 197 60.4
SMO356G0277 Selaginella moellendorffii HOM05D006727 ORTHO05D008408 1.5e-65 253.4 193 58.5
AUR62006372 Chenopodium quinoa HOM05D006727 ORTHO05D008408 5.5e-63 245.0 210 58.1
Pp3c2_32200 Physcomitrium patens HOM05D006727 ORTHO05D008408 5.1e-61 238.4 221 52.9
Nitab4.5_0000330g0040 Nicotiana tabacum HOM05D006727 ORTHO05D008408 9.7e-60 234.2 139 77.7
Actinidia20787 Actinidia chinensis HOM05D006727 ORTHO05D008408 1.4e-58 230.3 130 80.8
Ca_07756_v3 Cicer arietinum L. HOM05D006727 ORTHO05D008408 2.2e-56 223.0 129 79.8
SHI12925 Sapria himalayana HOM05D006727 ORTHO05D008408 1.3e-48 197.2 126 73.8
Sopen03g037430 Solanum pennellii HOM05D006727 ORTHO05D008408 8.8e-45 184.5 114 76.3
Oeu060435.2 Olea europaea HOM05D006727 ORTHO05D008408 1.5e-44 183.7 103 80.6
AagrBONN_evm.TU.Sc2ySwM_344.2624 Anthoceros agrestis HOM05D006727 ORTHO05D008408 1.3e-43 180.6 148 52.7
Cre01.g049450 Chlamydomonas reinhardtii HOM05D006727 ORTHO05D008408 4.7e-38 162.2 223 37.7
BraA09t39934Z Brassica rapa HOM05D006727 ORTHO05D008408 4.4e-36 155.6 128 63.3
A09p44730 Brassica napus HOM05D006727 ORTHO05D008408 2.8e-35 152.9 128 61.7
PRCOL_00001207 Prasinoderma coloniale HOM05D006727 ORTHO05D008408 2.5e-31 139.8 215 29.8
Solyc03g118520.4 Solanum lycopersicum HOM05D006727 ORTHO05D008408 2.0e-28 130.2 77 75.3
Sopen03g037400 Solanum pennellii HOM05D006727 ORTHO05D008408 7.5e-28 128.3 72 76.4
MCO09G625 Micromonas commoda HOM05D006727 ORTHO05D008408 9.8e-28 127.9 166 34.3
AagrBONN_evm.TU.Sc2ySwM_344.2622 Anthoceros agrestis HOM05D006727 ORTHO05D008408 1.7e-27 127.1 100 55.0
PSO017G2966 Papaver somniferum HOM05D004863 ORTHO05D005802 4.5e-25 119.0 77 71.4
AL1G25050 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 1.0e-21 107.8 64 75.0
SEGI_08771 Sequoiadendron giganteum HOM05D006727 ORTHO05D008408 6.8e-21 105.1 58 72.4
AL8G15680 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 1.3e-19 100.9 51 82.4
BolC8t50296H Brassica oleracea HOM05D006727 ORTHO05D008408 5.9e-17 92.0 71 62.0
MD12G1088300 Malus domestica HOM05D006727 ORTHO05D008408 2.0e-12 77.0 64 59.4
Carub.0007s3202 Capsella rubella HOM05D006727 ORTHO05D008408 1.3e-11 74.3 57 71.9
A03p48380 Brassica napus HOM05D023373 ORTHO05D024557 5.0e-08 62.4 94 43.6


User provided reference genes

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