Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p032111 Quercus lobata HOM05D007999 ORTHO05D000248 4.6e-138 494.6 252 100.0
CiPaw.09G221400 Carya illinoinensis HOM05D007999 ORTHO05D000248 1.9e-35 153.7 138 64.5
Thecc.04G151500 Theobroma cacao HOM05D007999 ORTHO05D000248 1.7e-31 140.6 136 58.1
Gohir.A03G087400 Gossypium hirsutum HOM05D007999 ORTHO05D000248 1.1e-30 137.9 125 62.4
Gohir.D02G108100 Gossypium hirsutum HOM05D007999 ORTHO05D000248 1.1e-30 137.9 125 62.4
Gorai.005G122700 Gossypium raimondii HOM05D007999 ORTHO05D000248 5.9e-29 132.1 125 60.8
Manes.09G117900 Manihot esculenta HOM05D007999 ORTHO05D000248 1.0e-28 131.3 129 62.0
Haze_21176 Corylus avellana HOM05D007999 ORTHO05D000248 1.5e-27 127.5 124 58.1
Cfa017033 Carpinus fangiana HOM05D007999 ORTHO05D000248 4.3e-27 125.9 129 54.3
Hma1.2p1_0537F.1_g174340 Hydrangea macrophylla HOM05D007999 ORTHO05D000248 2.3e-25 120.2 126 57.9
Potri.016G136800 Populus trichocarpa HOM05D007999 ORTHO05D000248 2.3e-25 120.2 134 56.7
Ciclev10013035m.g Citrus clementina HOM05D007999 ORTHO05D000248 4.0e-25 119.4 139 54.7
Sabra04G0153500 Salix brachista HOM05D007999 ORTHO05D000248 8.9e-25 118.2 133 57.1
Dinv25344 Davidia involucrata HOM05D007999 ORTHO05D000248 1.2e-24 117.9 114 62.3
Psat7g234760 Pisum sativum HOM05D007999 ORTHO05D000248 3.4e-24 116.3 146 50.0
VMungo0331G0380 Vigna mungo HOM05D007999 ORTHO05D000248 3.4e-24 116.3 125 52.8
Phvul.010G070300 Phaseolus vulgaris HOM05D007999 ORTHO05D000248 5.8e-24 115.5 126 54.0
Glyma.01G133200 Glycine max HOM05D007999 ORTHO05D000248 7.5e-24 115.2 130 53.8
Rhsim05G0230600 Rhododendron simsii HOM05D007999 ORTHO05D000248 9.8e-24 114.8 127 57.5
Actinidia11508 Actinidia chinensis HOM05D007999 ORTHO05D000248 2.9e-23 113.2 133 51.9
Lj3g0012389 Lotus japonicus HOM05D007999 ORTHO05D000248 8.3e-23 111.7 126 54.8
COL.COLO4_06481 Corchorus olitorius HOM05D007752 ORTHO05D000248 4.1e-22 109.4 122 56.6
Glyma.03G034300 Glycine max HOM05D007999 ORTHO05D000248 4.1e-22 109.4 124 51.6
Medtr4g028110 Medicago truncatula HOM05D007999 ORTHO05D000248 7.0e-22 108.6 127 55.9
Gohir.A10G150800 Gossypium hirsutum HOM05D007999 ORTHO05D000248 1.6e-21 107.5 134 50.7
Migut.J00037 Erythranthe guttata HOM05D007999 ORTHO05D000248 4.6e-21 105.9 139 46.8
Gohir.D10G115500 Gossypium hirsutum HOM05D007999 ORTHO05D000248 1.0e-20 104.8 121 53.7
Gorai.011G127200 Gossypium raimondii HOM05D007999 ORTHO05D000248 1.0e-20 104.8 121 53.7
Lsat_1_v5_gn_8_107720 Lactuca sativa HOM05D007999 ORTHO05D000248 3.0e-20 103.2 131 51.1
TPR.G5017 Trifolium pratense HOM05D007999 ORTHO05D000248 3.9e-20 102.8 126 52.4
Nitab4.5_0000048g0020 Nicotiana tabacum HOM05D007999 ORTHO05D000248 5.0e-20 102.4 131 48.9
Ca_26988_v3 Cicer arietinum L. HOM05D007999 ORTHO05D000248 1.1e-19 101.3 126 50.8
Lalb_Chr07g0190371 Lupinus albus HOM05D007999 ORTHO05D000248 1.1e-19 101.3 120 54.2
Nitab4.5_0004433g0050 Nicotiana tabacum HOM05D007999 ORTHO05D000248 1.5e-19 100.9 131 46.6
Oeu060433.1 Olea europaea HOM05D007999 ORTHO05D000248 1.5e-19 100.9 127 51.2
FAN02G1196 Fragaria x ananassa HOM05D007999 ORTHO05D000248 1.9e-19 100.5 125 47.2
FvH4_6g09860 Fragaria vesca HOM05D007999 ORTHO05D000248 3.3e-19 99.8 127 49.6
Nn2g10298 Nelumbo nucifera HOM05D007999 ORTHO05D000248 5.6e-19 99.0 118 53.4
Atru.chr8.114 Acer truncatum HOM05D007999 ORTHO05D000248 1.2e-18 97.8 140 49.3
MSTRG.5499 Avicennia marina HOM05D007999 ORTHO05D000248 2.1e-18 97.1 133 45.9
RcHm_v2.0_Chr3g0460461 Rosa chinensis HOM05D007999 ORTHO05D000248 3.6e-18 96.3 125 48.8
SGA_v2.0_scaffold373G50183 Striga asiatica HOM05D007999 ORTHO05D000248 1.1e-17 94.7 135 43.7
TAR267G0002 Trochodendron aralioides HOM05D007999 ORTHO05D000248 4.0e-17 92.8 124 50.0
TAR636G2047 Trochodendron aralioides HOM05D007999 ORTHO05D000248 5.2e-17 92.4 124 49.2
ECA236G4781 Erigeron canadensis HOM05D007999 ORTHO05D000248 2.0e-16 90.5 91 57.1
Prupe.6G293700 Prunus persica HOM05D007999 ORTHO05D000248 2.0e-16 90.5 120 44.2
Cpa.g.sc86.58 Carica papaya HOM05D007999 ORTHO05D000248 2.6e-16 90.1 124 49.2
ClCG10G022740 Citrullus lanatus HOM05D007999 ORTHO05D000248 7.5e-16 88.6 126 47.6
PGSC0003DMG400031466 Solanum tuberosum HOM05D007999 ORTHO05D000248 6.4e-15 85.5 128 43.0
Solyc09g042230.2 Solanum lycopersicum HOM05D007999 ORTHO05D000248 1.1e-14 84.7 127 40.2
SalBow8G1753 Salvia bowleyana HOM05D007999 ORTHO05D000248 1.4e-14 84.3 119 43.7
FAN14G1029 Fragaria x ananassa HOM05D007752 ORTHO05D009994 2.4e-14 83.6 114 43.9
Medtr7g073270 Medicago truncatula HOM05D007999 ORTHO05D000248 2.4e-14 83.6 127 47.2
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 3.2e-14 83.2 116 43.1
TPR.G14122 Trifolium pratense HOM05D007999 ORTHO05D000248 5.4e-14 82.4 127 44.9
Lalb_Chr03g0043771 Lupinus albus HOM05D007999 ORTHO05D000248 1.2e-13 81.3 137 43.1
Lj1g0020119 Lotus japonicus HOM05D007999 ORTHO05D000248 2.1e-13 80.5 129 46.5
Phvul.008G082700 Phaseolus vulgaris HOM05D007999 ORTHO05D000248 2.7e-13 80.1 128 45.3
Sopen09g015370 Solanum pennellii HOM05D007999 ORTHO05D000248 2.7e-13 80.1 120 41.7
MBI03_g22788_MAGBIO Magnolia biondii HOM05D007999 ORTHO05D000248 3.5e-13 79.7 115 47.0
AUR62006417 Chenopodium quinoa HOM05D007752 ORTHO05D000248 6.0e-13 79.0 133 45.9
VMungo1383G2835 Vigna mungo HOM05D007999 ORTHO05D000248 6.0e-13 79.0 127 44.1
Psat3g118800 Pisum sativum HOM05D007999 ORTHO05D000248 1.0e-12 78.2 127 44.1
Sed0006729 Sechium edule HOM05D007999 ORTHO05D000248 6.6e-12 75.5 133 42.1
Actinidia29032 Actinidia chinensis HOM05D007752 ORTHO05D009994 8.6e-12 75.1 94 53.2
Peaxi162Scf00732g00031 Petunia axillaris HOM05D007752 ORTHO05D000248 8.6e-12 75.1 88 47.7
Peaxi162Scf00732g00333 Petunia axillaris HOM05D007999 ORTHO05D000248 8.6e-12 75.1 97 45.4
EL10Ac7g17101 Beta vulgaris HOM05D007752 ORTHO05D000248 2.5e-11 73.6 98 45.9
Sp5g05490 Schrenkiella parvula HOM05D007999 ORTHO05D000248 2.5e-11 73.6 118 44.9
Carub.0005s2390 Capsella rubella HOM05D007999 ORTHO05D000248 4.3e-11 72.8 119 42.0
Ah.08g209300 Amaranthus hybridus HOM05D007999 ORTHO05D000248 9.5e-11 71.6 129 36.4
AUR62029765 Chenopodium quinoa HOM05D007752 ORTHO05D009994 9.5e-11 71.6 100 43.0
Sc20g0006970 Simmondsia chinensis HOM05D007999 ORTHO05D000248 9.5e-11 71.6 125 38.4
Aqoxy4G02427 Aquilegia oxysepala HOM05D007999 ORTHO05D000248 3.6e-10 69.7 116 41.4
Thhalv10006368m.g Eutrema salsugineum HOM05D007999 ORTHO05D000248 3.6e-10 69.7 125 40.8
C08p32430 Brassica napus HOM05D002367 ORTHO05D009515 5.2e-09 65.9 213 32.4
BolC8t50857H Brassica oleracea HOM05D007999 ORTHO05D000248 5.2e-09 65.9 123 39.8
BcaC07g40025 Brassica carinata HOM05D007585 ORTHO05D009515 6.8e-09 65.5 213 32.4
A09p50020 Brassica napus HOM05D002367 ORTHO05D009515 6.8e-09 65.5 121 40.5
BraA09t40452Z Brassica rapa HOM05D007999 ORTHO05D000248 1.2e-08 64.7 120 40.8
Oeu060213.1 Olea europaea HOM05D007999 ORTHO05D000248 1.2e-08 64.7 90 43.3
unitig_749.g14092 Utricularia gibba HOM05D007999 ORTHO05D000248 3.4e-08 63.2 112 36.6
BcaC07g40047 Brassica carinata HOM05D007585 ORTHO05D009515 4.4e-08 62.8 121 40.5
BcaC07g40077 Brassica carinata HOM05D007585 ORTHO05D009515 4.4e-08 62.8 121 40.5
Oeu060211.1 Olea europaea HOM05D000784 ORTHO05D000248 3.7e-07 59.7 89 41.6
Oeu057981.1 Olea europaea HOM05D007752 ORTHO05D009994 7.1e-06 55.5 48 56.2


User provided reference genes

Program Settings