Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p031297 Quercus lobata HOM05D003003 ORTHO05D008343 7.3e-92 340.5 167 100.0
QL07p031603 Quercus lobata HOM05D003003 ORTHO05D008343 9.5e-84 313.5 156 98.7
Cfa017002 Carpinus fangiana HOM05D003003 ORTHO05D008343 1.8e-58 229.6 155 78.1
RcHm_v2.0_Chr3g0460061 Rosa chinensis HOM05D003003 ORTHO05D008343 4.0e-58 228.4 165 72.1
Haze_21204 Corylus avellana HOM05D003003 ORTHO05D008343 1.1e-55 220.3 169 71.6
CiPaw.09G223200 Carya illinoinensis HOM05D003003 ORTHO05D008343 1.0e-53 213.8 127 85.8
Duzib151G0009 Durio zibethinus HOM05D003003 ORTHO05D008343 1.9e-52 209.5 155 69.7
Gohir.D02G106600 Gossypium hirsutum HOM05D003003 ORTHO05D008343 1.3e-51 206.8 155 68.4
Gohir.A02G089500 Gossypium hirsutum HOM05D003003 ORTHO05D008343 1.6e-51 206.5 155 68.4
FAN14G2421 Fragaria x ananassa HOM05D003003 ORTHO05D008343 2.8e-51 205.7 146 71.9
FAN05G1701 Fragaria x ananassa HOM05D003003 ORTHO05D008343 6.2e-51 204.5 149 70.5
FvH4_6g09480 Fragaria vesca HOM05D003003 ORTHO05D008343 1.1e-50 203.8 146 71.2
Ciclev10012371m.g Citrus clementina HOM05D003003 ORTHO05D008343 2.4e-50 202.6 156 69.2
Hma1.2p1_0174F.1_g076680 Hydrangea macrophylla HOM05D003003 ORTHO05D008343 1.5e-49 199.9 155 70.3
Hma1.2p1_0174F.1_g076690 Hydrangea macrophylla HOM05D003003 ORTHO05D008343 1.5e-49 199.9 155 70.3
FAN02G2939 Fragaria x ananassa HOM05D003003 ORTHO05D008343 3.4e-49 198.7 162 66.0
Atru.chr8.74 Acer truncatum HOM05D003003 ORTHO05D008343 4.5e-49 198.4 155 69.7
Thecc.04G148400 Theobroma cacao HOM05D003003 ORTHO05D008343 1.4e-47 193.4 155 67.1
Glyma.09G272400 Glycine max HOM05D003003 ORTHO05D008343 1.3e-45 186.8 156 64.1
Psat3g117440 Pisum sativum HOM05D003003 ORTHO05D008343 5.1e-45 184.9 140 67.9
VMungo1383G2339 Vigna mungo HOM05D003003 ORTHO05D008343 6.7e-45 184.5 156 63.5
Phvul.008G079900 Phaseolus vulgaris HOM05D003003 ORTHO05D008343 1.9e-44 183.0 128 70.3
TWI74G0515 Tripterygium wilfordii HOM05D003003 ORTHO05D008343 1.9e-44 183.0 155 63.9
Sabra04G0156600 Salix brachista HOM05D003003 ORTHO05D008343 2.5e-44 182.6 155 64.5
TAR633G0041 Trochodendron aralioides HOM05D003003 ORTHO05D008343 4.3e-44 181.8 156 64.7
arahy.Tifrunner.gnm1.ann1.NKAS4C Arachis hypogaea HOM05D003003 ORTHO05D008343 7.4e-44 181.0 128 68.8
arahy.Tifrunner.gnm1.ann1.V4D1ZF Arachis hypogaea HOM05D003003 ORTHO05D008343 7.4e-44 181.0 128 68.8
arahy.Tifrunner.gnm1.ann1.7LY3NN Arachis hypogaea HOM05D003003 ORTHO05D008343 9.7e-44 180.6 128 68.8
CANSAT21G0154 Cannabis sativa HOM05D003003 ORTHO05D008343 9.7e-44 180.6 127 68.5
Prupe.6G296900 Prunus persica HOM05D003003 ORTHO05D008343 9.7e-44 180.6 156 61.5
PGR004G0262 Punica granatum HOM05D003003 ORTHO05D008343 1.3e-43 180.3 152 62.5
EL10Ac7g17135 Beta vulgaris HOM05D003003 ORTHO05D008343 1.6e-43 179.9 132 74.2
CSS0014362 Camellia sinensis var. sinensis HOM05D003003 ORTHO05D008343 2.2e-43 179.5 114 79.8
Gorai.005G121100 Gossypium raimondii HOM05D003003 ORTHO05D008343 2.2e-43 179.5 143 65.0
Potri.016G140000 Populus trichocarpa HOM05D003003 ORTHO05D008343 2.8e-43 179.1 151 64.2
Ca_07787_v3 Cicer arietinum L. HOM05D003003 ORTHO05D008343 6.3e-43 177.9 128 69.5
HanXRQChr01g0000501 Helianthus annuus HOM05D003003 ORTHO05D008343 6.3e-43 177.9 150 62.7
Sed0024487 Sechium edule HOM05D003003 ORTHO05D008343 8.2e-43 177.6 157 61.8
Medtr7g073990 Medicago truncatula HOM05D003003 ORTHO05D008343 1.1e-42 177.2 128 69.5
TPR.G24287 Trifolium pratense HOM05D003003 ORTHO05D008343 1.1e-42 177.2 128 68.0
Lj1g0019401 Lotus japonicus HOM05D003003 ORTHO05D008343 4.1e-42 175.3 156 60.9
Migut.J00015 Erythranthe guttata HOM05D003003 ORTHO05D008343 6.9e-42 174.5 158 61.4
GSVIVG01029873001 Vitis vinifera HOM05D003003 ORTHO05D008343 9.0e-42 174.1 112 79.5
MD12G1192400 Malus domestica HOM05D003003 ORTHO05D008343 2.0e-41 172.9 167 58.1
Nn2g10236 Nelumbo nucifera HOM05D003003 ORTHO05D008343 3.4e-41 172.2 157 61.8
Nitab4.5_0007589g0030 Nicotiana tabacum HOM05D003003 ORTHO05D008343 7.6e-41 171.0 151 62.3
Hund19741 Selenicereus undatus HOM05D003003 ORTHO05D008343 7.6e-41 171.0 155 60.6
Sc22g0001890 Simmondsia chinensis HOM05D003003 ORTHO05D008343 7.6e-41 171.0 115 73.0
Manes.08G168900 Manihot esculenta HOM05D003003 ORTHO05D008343 1.3e-40 170.2 112 73.2
MBI15_g36681_MAGBIO Magnolia biondii HOM05D003003 ORTHO05D008343 2.9e-40 169.1 158 62.7
Sed0015775 Sechium edule HOM05D003003 ORTHO05D008343 3.8e-40 168.7 130 66.2
MSTRG.18930 Avicennia marina HOM05D003003 ORTHO05D008343 6.5e-40 167.9 156 59.0
CAN.G659.15 Capsicum annuum HOM05D003003 ORTHO05D008343 6.5e-40 167.9 107 79.4
Nitab4.5_0001215g0150 Nicotiana tabacum HOM05D003003 ORTHO05D008343 6.5e-40 167.9 149 63.8
SGA_v2.0_scaffold2144G54083 Striga asiatica HOM05D003003 ORTHO05D008343 8.5e-40 167.5 141 61.7
SGA_v2.0_scaffold373G50193 Striga asiatica HOM05D003003 ORTHO05D008343 8.5e-40 167.5 141 61.7
Glyma.18G216900 Glycine max HOM05D003003 ORTHO05D008343 1.1e-39 167.2 110 75.5
ECA248G3306 Erigeron canadensis HOM05D003003 ORTHO05D008343 2.5e-39 166.0 111 76.6
Actinidia11485 Actinidia chinensis HOM05D000166 ORTHO05D001348 3.2e-39 165.6 132 66.7
Lj1g0016212 Lotus japonicus HOM05D003003 ORTHO05D008343 4.2e-39 165.2 128 67.2
THA.LOC104806235 Tarenaya hassleriana HOM05D003003 ORTHO05D008343 7.2e-39 164.5 126 68.3
Eucgr.K01296 Eucalyptus grandis HOM05D003003 ORTHO05D008343 9.3e-39 164.1 115 70.4
Sopen10g027400 Solanum pennellii HOM05D003003 ORTHO05D008343 6.1e-38 161.4 141 64.5
CsaV3_4G027340 Cucumis sativus L. HOM05D003003 ORTHO05D008343 2.3e-37 159.5 156 57.1
Solyc10g074910.2 Solanum lycopersicum HOM05D003003 ORTHO05D008343 3.0e-37 159.1 107 74.8
MD04G1177200 Malus domestica HOM05D003003 ORTHO05D008343 5.1e-37 158.3 158 56.3
Cc06_g00240 Coffea canephora HOM05D003003 ORTHO05D008343 8.8e-37 157.5 112 71.4
Aa31LG2G13930 Aethionema arabicum HOM05D003003 ORTHO05D008343 3.3e-36 155.6 130 62.3
Thhalv10008400m.g Eutrema salsugineum HOM05D003003 ORTHO05D008343 3.3e-36 155.6 148 58.8
unitig_27.g24893 Utricularia gibba HOM05D003003 ORTHO05D008343 3.3e-36 155.6 157 56.1
BcaB03g13769 Brassica carinata HOM05D003003 ORTHO05D008343 9.7e-36 154.1 150 57.3
AUR62006445 Chenopodium quinoa HOM05D003003 ORTHO05D008343 1.3e-35 153.7 97 79.4
CARHR031420 Cardamine hirsuta HOM05D003003 ORTHO05D008343 1.7e-35 153.3 150 56.7
Carub.0001s3039 Capsella rubella HOM05D003003 ORTHO05D008343 2.8e-35 152.5 129 62.8
BcaC05g27931 Brassica carinata HOM05D003003 ORTHO05D008343 1.4e-34 150.2 128 64.1
C05p39360 Brassica napus HOM05D005120 ORTHO05D006174 1.4e-34 150.2 128 64.1
BolC5t32672H Brassica oleracea HOM05D005120 ORTHO05D006174 1.4e-34 150.2 128 64.1
Lalb_Chr03g0043871 Lupinus albus HOM05D003003 ORTHO05D008343 1.8e-34 149.8 114 65.8
PSO017G2464 Papaver somniferum HOM05D003003 ORTHO05D008343 2.4e-34 149.4 135 55.6
Zm00001eb290780 Zea mays HOM05D003003 ORTHO05D008343 2.4e-34 149.4 119 63.0
Rhsim05G0233000 Rhododendron simsii HOM05D003003 ORTHO05D008343 3.1e-34 149.1 97 76.3
AL1G46140 Arabidopsis lyrata HOM05D003003 ORTHO05D008343 4.1e-34 148.7 129 61.2
PSO170G6425 Papaver somniferum HOM05D003003 ORTHO05D008343 6.9e-34 147.9 135 55.6
Aqoxy4G03302 Aquilegia oxysepala HOM05D003003 ORTHO05D008343 9.1e-34 147.5 130 59.2
AT1G32070 Arabidopsis thaliana HOM05D003003 ORTHO05D008343 9.1e-34 147.5 130 60.0
CDE06G1541 Ceratophyllum demersum HOM05D003003 ORTHO05D008343 2.0e-33 146.4 103 68.0
Sp1g27730 Schrenkiella parvula HOM05D003003 ORTHO05D008343 4.5e-33 145.2 149 54.4
Peaxi162Scf00374g00029 Petunia axillaris HOM05D003003 ORTHO05D008343 5.9e-33 144.8 87 83.9
Os05g0481000 Oryza sativa ssp. japonica HOM05D003003 ORTHO05D008343 5.0e-32 141.7 112 61.6
vmacro20392 Vaccinium macrocarpon HOM05D003003 ORTHO05D008343 5.0e-32 141.7 90 77.8
Lj2A56T95 Lonicera japonica HOM05D003003 ORTHO05D008343 1.1e-31 140.6 89 80.9
DCAR_023966 Daucus carota HOM05D003003 ORTHO05D008343 1.4e-31 140.2 93 76.3
A05p25290 Brassica napus HOM05D005120 ORTHO05D006174 5.5e-31 138.3 130 58.5
BraA05t21414Z Brassica rapa HOM05D003003 ORTHO05D008343 5.5e-31 138.3 130 58.5
Prupe.6G297300 Prunus persica HOM05D003003 ORTHO05D008343 9.4e-31 137.5 82 79.3
SEGI_32854 Sequoiadendron giganteum HOM05D003003 ORTHO05D008343 9.4e-31 137.5 159 49.7
MELO3C025253.2 Cucumis melo HOM05D003003 ORTHO05D008343 1.6e-30 136.7 230 40.0
Lsat_1_v5_gn_8_123140 Lactuca sativa HOM05D003003 ORTHO05D008343 4.7e-30 135.2 72 87.5
ATR1127G143 Amborella trichopoda HOM05D003003 ORTHO05D008343 6.7e-29 131.3 107 62.6
Dinv16947 Davidia involucrata HOM05D003003 ORTHO05D008343 7.4e-28 127.9 165 50.3
ClCG04G006230 Citrullus lanatus HOM05D003003 ORTHO05D008343 9.7e-28 127.5 72 84.7
HPP92_019756 Vanilla planifolia HOM05D003003 ORTHO05D008343 9.7e-28 127.5 118 54.2
CSS0024099 Camellia sinensis var. sinensis HOM05D003003 ORTHO05D008343 1.1e-23 114.0 80 72.5
Mapoly0166s0017 Marchantia polymorpha HOM05D003003 ORTHO05D008343 3.2e-23 112.5 109 51.4
SMO230G0119 Selaginella moellendorffii HOM05D003003 ORTHO05D008343 3.2e-23 112.5 105 52.4
SMO336G0035 Selaginella moellendorffii HOM05D003003 ORTHO05D008343 3.2e-23 112.5 105 52.4
Cpa.g.sc72.27 Carica papaya HOM05D003003 ORTHO05D008343 7.2e-23 111.3 121 54.5
FAN09G1188 Fragaria x ananassa HOM05D003003 ORTHO05D008343 8.0e-22 107.8 98 58.2
CBR_g38036 Chara braunii HOM05D003003 ORTHO05D008343 3.9e-21 105.5 125 43.2
Pp3c11_26820 Physcomitrium patens HOM05D003003 ORTHO05D008343 6.7e-21 104.8 102 52.9
Rhsim04G0150500 Rhododendron simsii HOM05D003003 ORTHO05D008343 5.3e-18 95.1 108 55.6
MCO12G079 Micromonas commoda HOM05D003003 ORTHO05D008343 2.5e-15 86.3 62 59.7
FAN14G0728 Fragaria x ananassa HOM05D003003 ORTHO05D008343 3.2e-15 85.9 61 70.5
PRCOL_00004485 Prasinoderma coloniale HOM05D003003 ORTHO05D008343 8.0e-14 81.3 62 53.2
Rhsim09G0022100 Rhododendron simsii HOM05D003003 ORTHO05D008343 1.0e-13 80.9 77 54.5
AagrBONN_evm.TU.Sc2ySwM_368.2754 Anthoceros agrestis HOM05D003003 ORTHO05D008343 1.8e-13 80.1 50 70.0
RcHm_v2.0_Chr1g0328921 Rosa chinensis HOM05D003003 ORTHO05D008343 3.6e-06 55.8 51 58.8


User provided reference genes

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