Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p031114 Quercus lobata HOM05D003174 ORTHO05D003439 3.2e-56 221.5 107 100.0
QL07p047847 Quercus lobata HOM05D003174 ORTHO05D003439 2.1e-28 129.0 86 79.1
Gohir.D09G152900 Gossypium hirsutum HOM05D003174 ORTHO05D003439 1.6e-12 76.3 91 49.5
Gorai.006G174400 Gossypium raimondii HOM05D003174 ORTHO05D003439 1.6e-12 76.3 91 49.5
Gohir.A09G157600 Gossypium hirsutum HOM05D003174 ORTHO05D003439 3.7e-12 75.1 75 52.0
CSS0007124 Camellia sinensis var. sinensis HOM05D003174 ORTHO05D003439 3.1e-11 72.0 82 47.6
CANSAT21G1894 Cannabis sativa HOM05D003174 ORTHO05D003439 4.0e-11 71.6 73 54.8
Sed0000072 Sechium edule HOM05D003174 ORTHO05D003439 1.2e-10 70.1 58 62.1
CsaV3_4G024810 Cucumis sativus L. HOM05D003174 ORTHO05D003439 4.5e-10 68.2 64 54.7
Ciclev10011079m.g Citrus clementina HOM05D003174 ORTHO05D003439 5.8e-10 67.8 75 49.3
MELO3C003115.2 Cucumis melo HOM05D003174 ORTHO05D003439 1.7e-09 66.2 79 48.1
CiPaw.10G144200 Carya illinoinensis HOM05D003174 ORTHO05D003439 3.8e-09 65.1 58 58.6
Duzib106G0893 Durio zibethinus HOM05D003174 ORTHO05D003439 8.4e-09 63.9 92 40.2
Prupe.6G252000 Prunus persica HOM05D003174 ORTHO05D003439 8.4e-09 63.9 85 44.7
TAR629G3457 Trochodendron aralioides HOM05D003174 ORTHO05D003439 2.5e-08 62.4 97 43.3
MD04G1124900 Malus domestica HOM05D003174 ORTHO05D003439 3.2e-08 62.0 75 49.3
TAR623G0639 Trochodendron aralioides HOM05D003174 ORTHO05D003439 5.5e-08 61.2 64 51.6
GSVIVG01034205001 Vitis vinifera HOM05D003174 ORTHO05D003439 5.5e-08 61.2 60 56.7
Haze_20757 Corylus avellana HOM05D003174 ORTHO05D003439 7.1e-08 60.8 33 78.8
Potri.004G077400 Populus trichocarpa HOM05D003174 ORTHO05D003439 9.3e-08 60.5 78 46.2
Oeu047349.2 Olea europaea HOM05D003174 ORTHO05D003439 1.2e-07 60.1 99 37.4
TWI53G0288 Tripterygium wilfordii HOM05D003174 ORTHO05D003439 1.2e-07 60.1 73 45.2
Dinv35623 Davidia involucrata HOM05D003174 ORTHO05D003439 1.6e-07 59.7 83 47.0
COL.COLO4_14835 Corchorus olitorius HOM05D003174 ORTHO05D003439 2.1e-07 59.3 78 42.3
Lj3A970G57 Lonicera japonica HOM05D003174 ORTHO05D003439 2.7e-07 58.9 73 43.8
Actinidia11253 Actinidia chinensis HOM05D003174 ORTHO05D003439 4.6e-07 58.2 59 50.8
Cc06_g02850 Coffea canephora HOM05D003174 ORTHO05D003439 4.6e-07 58.2 64 51.6
Aa31LG1G22280 Aethionema arabicum HOM05D003174 ORTHO05D003439 6.0e-07 57.8 73 42.5
Nn2g10415 Nelumbo nucifera HOM05D003174 ORTHO05D003439 6.0e-07 57.8 90 42.2
Lj1g0011268 Lotus japonicus HOM05D003174 ORTHO05D003439 7.9e-07 57.4 60 53.3
vmacro20133 Vaccinium macrocarpon HOM05D003174 ORTHO05D003439 7.9e-07 57.4 46 63.0
CARHR210840 Cardamine hirsuta HOM05D003174 ORTHO05D003439 1.3e-06 56.6 94 35.1
Solyc09g010550.4 Solanum lycopersicum HOM05D003174 ORTHO05D003439 1.8e-06 56.2 94 39.4
Nitab4.5_0000761g0050 Nicotiana tabacum HOM05D003174 ORTHO05D003439 2.3e-06 55.8 70 42.9
Sopen09g005270 Solanum pennellii HOM05D003174 ORTHO05D003439 2.3e-06 55.8 94 38.3
MBI17_g16533_MAGBIO Magnolia biondii HOM05D003174 ORTHO05D003439 3.0e-06 55.5 71 46.5
THA.LOC104816287 Tarenaya hassleriana HOM05D003174 ORTHO05D003439 3.0e-06 55.5 77 44.2
FAN09G4813 Fragaria x ananassa HOM05D003174 ORTHO05D003439 3.9e-06 55.1 59 50.8
AL6G11780 Arabidopsis lyrata HOM05D003174 ORTHO05D003439 5.1e-06 54.7 84 35.7
AT5G02520 Arabidopsis thaliana HOM05D003174 ORTHO05D003439 6.7e-06 54.3 84 35.7
CAN.G97.37 Capsicum annuum HOM05D003174 ORTHO05D003439 6.7e-06 54.3 70 40.0
FAN05G5174 Fragaria x ananassa HOM05D003174 ORTHO05D003439 6.7e-06 54.3 56 53.6
Glyma.13G131100 Glycine max HOM05D003174 ORTHO05D003439 6.7e-06 54.3 56 50.0
Glyma.10G043400 Glycine max HOM05D003174 ORTHO05D003439 8.7e-06 53.9 69 46.4


User provided reference genes

Program Settings