Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p027003 Quercus lobata HOM05D006473 ORTHO05D008108 4.2e-88 328.2 189 100.0
QL07p026949 Quercus lobata HOM05D006473 ORTHO05D008108 3.8e-81 305.1 189 94.2
QL07p025679 Quercus lobata HOM05D006473 ORTHO05D008108 1.6e-79 299.7 189 92.6
QL10p019398 Quercus lobata HOM05D006473 ORTHO05D008108 3.4e-69 265.4 194 83.0
QL09p045725 Quercus lobata HOM05D006473 ORTHO05D008108 9.2e-59 230.7 152 92.8
QL07p026979 Quercus lobata HOM05D006473 ORTHO05D008108 1.2e-58 230.3 154 92.2
CiPaw.03G109100 Carya illinoinensis HOM05D006473 ORTHO05D008108 7.1e-43 177.9 191 59.2
Cfa023365 Carpinus fangiana HOM05D006473 ORTHO05D008108 9.9e-37 157.5 186 57.5
Haze_13544 Corylus avellana HOM05D006473 ORTHO05D008108 2.7e-34 149.4 184 54.3
CiPaw.04G072200 Carya illinoinensis HOM05D006473 ORTHO05D008108 1.3e-33 147.1 189 56.1
Prupe.3G184300 Prunus persica HOM05D006473 ORTHO05D008108 6.6e-33 144.8 182 55.5
TWI34G1686 Tripterygium wilfordii HOM05D006473 ORTHO05D008108 1.1e-32 144.1 186 58.6
RcHm_v2.0_Chr2g0153221 Rosa chinensis HOM05D006473 ORTHO05D008108 3.3e-32 142.5 190 48.9
QL04p064817 Quercus lobata HOM05D006473 ORTHO05D008108 4.3e-32 142.1 175 52.0
FAN05G1961 Fragaria x ananassa HOM05D006473 ORTHO05D008108 5.6e-32 141.7 191 48.7
COL.COLO4_19989 Corchorus olitorius HOM05D006473 ORTHO05D008108 1.6e-31 140.2 184 54.9
Thecc.01G174700 Theobroma cacao HOM05D006473 ORTHO05D008108 4.8e-31 138.7 182 48.4
Sabra06G0006200 Salix brachista HOM05D006473 ORTHO05D008108 1.8e-30 136.7 180 50.0
QL04p064939 Quercus lobata HOM05D006473 ORTHO05D008108 9.0e-30 134.4 176 51.7
MELO3C026363.2 Cucumis melo HOM05D006473 ORTHO05D008108 1.2e-29 134.0 181 47.5
Duzib138G0874 Durio zibethinus HOM05D006473 ORTHO05D008108 1.2e-29 134.0 179 49.2
FvH4_6g39300 Fragaria vesca HOM05D006473 ORTHO05D008108 1.5e-29 133.7 187 46.5
Potri.006G008000 Populus trichocarpa HOM05D006473 ORTHO05D008108 3.4e-29 132.5 184 48.9
CsaV3_4G032520 Cucumis sativus L. HOM05D006473 ORTHO05D008108 2.2e-28 129.8 189 43.9
ClCG11G016910 Citrullus lanatus HOM05D006473 ORTHO05D008108 2.9e-28 129.4 178 48.9
COL.COLO4_18222 Corchorus olitorius HOM05D006473 ORTHO05D008108 3.8e-28 129.0 184 52.7
FAN09G0937 Fragaria x ananassa HOM05D006473 ORTHO05D008108 6.4e-28 128.3 197 45.7
FAN14G2613 Fragaria x ananassa HOM05D006473 ORTHO05D008108 6.4e-28 128.3 197 45.7
Gohir.D11G162300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 1.9e-27 126.7 188 45.7
Gorai.007G172600 Gossypium raimondii HOM05D006473 ORTHO05D008108 2.4e-27 126.3 188 45.2
Gohir.A11G155300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 3.2e-27 125.9 188 45.2
MD17G1129800 Malus domestica HOM05D006473 ORTHO05D008108 3.2e-27 125.9 202 43.6
MD09G1143500 Malus domestica HOM05D006473 ORTHO05D008108 5.4e-27 125.2 179 48.6
Lj6g0005292 Lotus japonicus HOM05D006473 ORTHO05D008108 2.1e-26 123.2 181 45.9
Sabra16G0000300 Salix brachista HOM05D006473 ORTHO05D008108 2.7e-26 122.9 197 44.2
Sed0014549 Sechium edule HOM05D006473 ORTHO05D008108 7.9e-26 121.3 181 46.4
Sed0027280 Sechium edule HOM05D006473 ORTHO05D008108 1.3e-25 120.6 182 46.2
CANSAT64G1482 Cannabis sativa HOM05D006473 ORTHO05D008108 1.8e-25 120.2 178 48.3
Phvul.007G120134 Phaseolus vulgaris HOM05D006473 ORTHO05D008108 1.5e-24 117.1 175 44.6
Haze_13545 Corylus avellana HOM05D006473 ORTHO05D008108 1.9e-24 116.7 143 53.8
Manes.08G068100 Manihot esculenta HOM05D006473 ORTHO05D008108 1.9e-24 116.7 174 56.9
TPR.G17559 Trifolium pratense HOM05D006473 ORTHO05D008108 1.9e-24 116.7 188 44.1
Medtr3g082070 Medicago truncatula HOM05D006473 ORTHO05D008108 9.6e-24 114.4 196 44.4
Glyma.13G004200 Glycine max HOM05D006473 ORTHO05D008108 1.3e-23 114.0 183 44.3
Ciclev10012907m.g Citrus clementina HOM05D006473 ORTHO05D008108 1.6e-23 113.6 167 47.3
PGR031G0759 Punica granatum HOM05D006473 ORTHO05D008108 2.1e-23 113.2 181 43.6
arahy.Tifrunner.gnm1.ann1.ITU10B Arachis hypogaea HOM05D006473 ORTHO05D008108 1.1e-22 110.9 174 44.3
Glyma.20G063000 Glycine max HOM05D006473 ORTHO05D008108 5.3e-22 108.6 179 43.0
Sp7g13370 Schrenkiella parvula HOM05D006473 ORTHO05D008108 1.5e-21 107.1 180 44.4
Psat5g106240 Pisum sativum HOM05D006473 ORTHO05D008108 4.5e-21 105.5 194 40.7
arahy.Tifrunner.gnm1.ann1.UN21ID Arachis hypogaea HOM05D006473 ORTHO05D008108 1.3e-20 104.0 170 42.9
Eucgr.A00949 Eucalyptus grandis HOM05D006473 ORTHO05D008108 1.9e-19 100.1 182 41.8
TAR626G1390 Trochodendron aralioides HOM05D006473 ORTHO05D008108 1.9e-19 100.1 172 43.0
Lalb_Chr17g0337141 Lupinus albus HOM05D006473 ORTHO05D008108 3.2e-19 99.4 167 40.7
Ca_16320_v3 Cicer arietinum L. HOM05D006473 ORTHO05D008108 4.2e-19 99.0 163 43.6
Atru.chr8.1011 Acer truncatum HOM05D006473 ORTHO05D008108 5.5e-19 98.6 180 47.2
CARHR221880 Cardamine hirsuta HOM05D006473 ORTHO05D008108 5.5e-19 98.6 181 40.9
TAR626G1015 Trochodendron aralioides HOM05D006473 ORTHO05D008108 9.3e-19 97.8 171 42.7
VMungo0540G0033 Vigna mungo HOM05D006473 ORTHO05D008108 1.2e-18 97.4 167 43.1
GSVIVG01015888001 Vitis vinifera HOM05D006473 ORTHO05D008108 1.2e-18 97.4 158 50.6
BraA05t20604Z Brassica rapa HOM05D006473 ORTHO05D008108 3.5e-18 95.9 175 41.7
AT4G15140 Arabidopsis thaliana HOM05D006473 ORTHO05D008108 7.9e-18 94.7 174 47.7
BcaC07g37876 Brassica carinata HOM05D006473 ORTHO05D008108 7.9e-18 94.7 182 42.3
BolC8t48269H Brassica oleracea HOM05D006473 ORTHO05D008108 7.9e-18 94.7 182 42.3
Nn7g38339 Nelumbo nucifera HOM05D006473 ORTHO05D008108 7.9e-18 94.7 175 37.7
A05p16970 Brassica napus HOM05D006473 ORTHO05D008108 1.0e-17 94.4 175 41.1
A08p11670 Brassica napus HOM05D006473 ORTHO05D008108 1.0e-17 94.4 179 43.0
BraA08t33161Z Brassica rapa HOM05D006473 ORTHO05D008108 1.0e-17 94.4 179 43.0
Carub.0007s2685 Capsella rubella HOM05D006473 ORTHO05D008108 1.0e-17 94.4 180 45.0
Cpa.g.sc8.265 Carica papaya HOM05D006473 ORTHO05D008108 1.0e-17 94.4 187 40.6
BcaB04g18284 Brassica carinata HOM05D006473 ORTHO05D008108 3.9e-17 92.4 182 41.8
Thhalv10027487m.g Eutrema salsugineum HOM05D006473 ORTHO05D008108 6.7e-17 91.7 181 45.3
Aa31LG9G2250 Aethionema arabicum HOM05D006473 ORTHO05D008108 1.1e-16 90.9 171 50.9
BcaB02g07838 Brassica carinata HOM05D006473 ORTHO05D008108 1.5e-16 90.5 182 39.6
THA.LOC104808506 Tarenaya hassleriana HOM05D006473 ORTHO05D008108 1.5e-16 90.5 180 40.6
Peaxi162Scf00322g00416 Petunia axillaris HOM05D006473 ORTHO05D008108 1.9e-16 90.1 171 40.4
C06p16570 Brassica napus HOM05D006473 ORTHO05D008108 3.3e-16 89.4 175 40.0
BolC6t36859H Brassica oleracea HOM05D006473 ORTHO05D008108 3.3e-16 89.4 175 40.0
BcaC08g44251 Brassica carinata HOM05D006473 ORTHO05D008108 4.3e-16 89.0 175 40.0
AL7G40560 Arabidopsis lyrata HOM05D006473 ORTHO05D008108 5.6e-16 88.6 163 49.1
QL05p058452 Quercus lobata HOM05D000045 ORTHO05D000611 7.4e-16 88.2 101 51.5
Sopen07g022630 Solanum pennellii HOM05D006473 ORTHO05D008108 2.4e-14 83.2 182 37.4
PGSC0003DMG400013558 Solanum tuberosum HOM05D006473 ORTHO05D008108 2.4e-14 83.2 174 36.8
Nitab4.5_0002292g0030 Nicotiana tabacum HOM05D006473 ORTHO05D008108 4.0e-14 82.4 171 38.0
Solyc07g043070.3 Solanum lycopersicum HOM05D006473 ORTHO05D008108 4.0e-14 82.4 182 37.4
Peaxi162Scf00393g01011 Petunia axillaris HOM05D006473 ORTHO05D008108 5.3e-14 82.0 170 37.6
CAN.G529.20 Capsicum annuum HOM05D006473 ORTHO05D008108 1.2e-13 80.9 155 39.4
Migut.H01260 Erythranthe guttata HOM05D006473 ORTHO05D008108 2.2e-12 76.6 155 37.4
Nitab4.5_0011512g0010 Nicotiana tabacum HOM05D006473 ORTHO05D008108 2.9e-12 76.3 171 36.8
Cc00_g04870 Coffea canephora HOM05D006473 ORTHO05D008108 4.9e-12 75.5 159 37.1
Aqoxy5G02466 Aquilegia oxysepala HOM05D006473 ORTHO05D008108 1.2e-10 70.9 145 39.3
Sc07g0001930 Simmondsia chinensis HOM05D006473 ORTHO05D008108 1.2e-10 70.9 171 35.1
Cpa.g.sc32.52 Carica papaya HOM05D006473 ORTHO05D008108 2.1e-10 70.1 174 39.1
Rhsim12G0015400 Rhododendron simsii HOM05D006473 ORTHO05D008108 7.9e-10 68.2 157 38.9
CSS0026100 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 1.0e-09 67.8 185 36.2
CSS0046570 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 1.0e-09 67.8 185 36.2
Actinidia32074 Actinidia chinensis HOM05D006473 ORTHO05D008108 2.3e-09 66.6 191 35.1
Lsat_1_v5_gn_1_29560 Lactuca sativa HOM05D006473 ORTHO05D008108 3.9e-09 65.9 198 33.3
EL10Ac6g15336 Beta vulgaris HOM05D006473 ORTHO05D008108 6.7e-09 65.1 190 32.6
vmacro08765 Vaccinium macrocarpon HOM05D006473 ORTHO05D008108 1.1e-08 64.3 167 35.3
Actinidia12507 Actinidia chinensis HOM05D006473 ORTHO05D008108 7.4e-08 61.6 184 32.6
MBI02_g01129_MAGBIO Magnolia biondii HOM05D006464 ORTHO05D007923 7.4e-08 61.6 131 45.0
Nitab4.5_0000170g0320 Nicotiana tabacum HOM05D006473 ORTHO05D008108 7.4e-08 61.6 121 38.0
HanXRQChr02g0035171 Helianthus annuus HOM05D006473 ORTHO05D008108 9.7e-08 61.2 171 42.7
CDE05G3197 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 2.8e-07 59.7 48 60.4
ECA247G3587 Erigeron canadensis HOM05D006473 ORTHO05D008108 4.8e-07 58.9 177 32.8
ATR0763G071 Amborella trichopoda HOM05D006473 ORTHO05D008108 1.1e-06 57.8 178 31.5
DCAR_029496 Daucus carota HOM05D006473 ORTHO05D008108 1.1e-06 57.8 192 30.2
PSO675G8005 Papaver somniferum HOM05D006473 ORTHO05D008108 1.8e-06 57.0 164 36.6
HPP92_016064 Vanilla planifolia HOM05D006473 ORTHO05D008108 2.4e-06 56.6 70 48.6
CDE11G0296 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 5.3e-06 55.5 44 61.4
Hund04387 Selenicereus undatus HOM05D006473 ORTHO05D008108 6.9e-06 55.1 190 31.1
Hund23023 Selenicereus undatus HOM05D006473 ORTHO05D008108 6.9e-06 55.1 203 29.1
Zm00001eb078060 Zea mays HOM05D006473 ORTHO05D008108 9.0e-06 54.7 83 44.6


User provided reference genes

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