Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p025963 Quercus lobata HOM05D007404 ORTHO05D009281 1.8e-173 612.5 301 100.0
Cfa020098 Carpinus fangiana HOM05D007404 ORTHO05D009281 4.4e-95 352.1 266 70.3
Haze_20093 Corylus avellana HOM05D007404 ORTHO05D009281 2.2e-94 349.7 264 70.1
CiPaw.09G024800 Carya illinoinensis HOM05D007404 ORTHO05D009281 1.1e-93 347.4 267 70.4
CiPaw.10G021900 Carya illinoinensis HOM05D007404 ORTHO05D009281 7.2e-90 334.7 267 67.4
Duzib093G1799 Durio zibethinus HOM05D007404 ORTHO05D009281 3.8e-75 285.8 258 58.9
Thecc.05G182600 Theobroma cacao HOM05D007404 ORTHO05D009281 1.8e-72 276.9 264 55.7
Prupe.7G088400 Prunus persica HOM05D007404 ORTHO05D009281 2.4e-69 266.5 259 56.4
COL.COLO4_29466 Corchorus olitorius HOM05D007404 ORTHO05D009281 5.9e-68 261.9 258 52.3
Dinv25087 Davidia involucrata HOM05D007404 ORTHO05D009281 1.7e-67 260.4 266 56.0
Actinidia03848 Actinidia chinensis HOM05D007404 ORTHO05D009281 2.1e-65 253.4 265 53.6
Manes.08G038100 Manihot esculenta HOM05D007404 ORTHO05D009281 3.6e-65 252.7 232 56.9
MD14G1045900 Malus domestica HOM05D007404 ORTHO05D009281 6.8e-64 248.4 265 53.2
TWI74G0134 Tripterygium wilfordii HOM05D007404 ORTHO05D009281 5.8e-63 245.4 238 54.2
Atru.chr8.1254 Acer truncatum HOM05D007404 ORTHO05D009281 1.7e-62 243.8 261 54.0
Ciclev10012555m.g Citrus clementina HOM05D007404 ORTHO05D009281 2.4e-61 240.0 264 49.6
RcHm_v2.0_Chr3g0477561 Rosa chinensis HOM05D007404 ORTHO05D009281 5.4e-61 238.8 265 53.2
CANSAT64G1742 Cannabis sativa HOM05D007404 ORTHO05D009281 3.5e-60 236.1 263 54.0
Cpa.g.sc222.4 Carica papaya HOM05D007404 ORTHO05D009281 6.0e-60 235.3 263 51.3
MELO3C024593.2 Cucumis melo HOM05D007404 ORTHO05D009281 3.0e-59 233.0 267 52.1
FAN09G0350 Fragaria x ananassa HOM05D007404 ORTHO05D009281 8.6e-59 231.5 267 50.9
FAN05G3976 Fragaria x ananassa HOM05D007404 ORTHO05D009281 1.5e-58 230.7 265 50.9
FvH4_6g21130 Fragaria vesca HOM05D007404 ORTHO05D009281 2.5e-58 229.9 261 51.7
FAN14G5090 Fragaria x ananassa HOM05D007404 ORTHO05D009281 3.3e-58 229.6 264 50.8
CsaV3_6G041180 Cucumis sativus L. HOM05D007404 ORTHO05D009281 1.4e-56 224.2 258 50.0
FAN02G0840 Fragaria x ananassa HOM05D007404 ORTHO05D009281 1.4e-56 224.2 287 48.4
Gorai.002G232900 Gossypium raimondii HOM05D007404 ORTHO05D009281 5.2e-56 222.2 259 48.3
Rhsim03G0257900 Rhododendron simsii HOM05D007404 ORTHO05D009281 5.2e-56 222.2 264 48.9
ClCG01G015070 Citrullus lanatus HOM05D007404 ORTHO05D009281 1.2e-55 221.1 260 49.6
Sed0004973 Sechium edule HOM05D007404 ORTHO05D009281 2.6e-55 219.9 260 50.4
VMungo1383G2609 Vigna mungo HOM05D007404 ORTHO05D009281 3.7e-54 216.1 264 48.1
Glyma.03G205600 Glycine max HOM05D007404 ORTHO05D009281 4.9e-54 215.7 266 47.0
Potri.006G198500 Populus trichocarpa HOM05D007404 ORTHO05D009281 1.1e-53 214.5 238 55.5
Hma1.2p1_0304F.1_g119261 Hydrangea macrophylla HOM05D007404 ORTHO05D009281 9.2e-53 211.5 233 52.4
Phvul.001G199200 Phaseolus vulgaris HOM05D007404 ORTHO05D009281 9.2e-53 211.5 266 46.2
Actinidia03958 Actinidia chinensis HOM05D007404 ORTHO05D009281 1.6e-52 210.7 203 57.1
Gohir.A01G199200 Gossypium hirsutum HOM05D007404 ORTHO05D009281 3.5e-52 209.5 259 46.7
Glyma.19G203100 Glycine max HOM05D007404 ORTHO05D009281 3.9e-51 206.1 267 46.1
Sabra06G0152600 Salix brachista HOM05D007404 ORTHO05D009281 7.3e-50 201.8 268 48.5
vmacro06064 Vaccinium macrocarpon HOM05D007404 ORTHO05D009281 4.7e-49 199.1 228 51.3
Eucgr.A02534 Eucalyptus grandis HOM05D007404 ORTHO05D009281 5.2e-48 195.7 245 45.3
Lalb_Chr25g0287801 Lupinus albus HOM05D007404 ORTHO05D009281 6.8e-48 195.3 265 44.9
Ca_09089_v3 Cicer arietinum L. HOM05D007404 ORTHO05D009281 1.2e-47 194.5 227 48.5
arahy.Tifrunner.gnm1.ann1.T424Z8 Arachis hypogaea HOM05D007404 ORTHO05D009281 2.6e-47 193.4 265 45.3
Dinv11908 Davidia involucrata HOM05D007404 ORTHO05D009281 2.6e-47 193.4 213 53.1
TPR.G14403 Trifolium pratense HOM05D007404 ORTHO05D009281 5.8e-47 192.2 233 48.9
Lj1g0004547 Lotus japonicus HOM05D007404 ORTHO05D009281 7.5e-47 191.8 266 44.4
Medtr7g107080 Medicago truncatula HOM05D007404 ORTHO05D009281 2.9e-46 189.9 231 46.8
Gohir.D01G189300 Gossypium hirsutum HOM05D007404 ORTHO05D009281 8.3e-46 188.3 259 44.4
TAR623G1670 Trochodendron aralioides HOM05D007404 ORTHO05D009281 7.1e-45 185.3 264 47.0
Psat3g026720 Pisum sativum HOM05D007404 ORTHO05D009281 9.2e-45 184.9 230 45.2
Cc06_g07050 Coffea canephora HOM05D007404 ORTHO05D009281 7.8e-44 181.8 267 41.6
Nn2g14441 Nelumbo nucifera HOM05D007404 ORTHO05D009281 3.3e-42 176.4 289 38.4
PGSC0003DMG400022875 Solanum tuberosum HOM05D007404 ORTHO05D009281 3.3e-42 176.4 266 41.4
Peaxi162Scf00211g00002 Petunia axillaris HOM05D007404 ORTHO05D009281 7.3e-42 175.3 263 40.7
Solyc11g045270.3 Solanum lycopersicum HOM05D007404 ORTHO05D009281 6.2e-41 172.2 262 40.8
Nn2g14440 Nelumbo nucifera HOM05D007404 ORTHO05D009281 1.1e-40 171.4 289 40.1
Lj1C1059T6 Lonicera japonica HOM05D007404 ORTHO05D009281 1.4e-40 171.0 273 43.2
PGR004G0377 Punica granatum HOM05D007404 ORTHO05D009281 2.4e-40 170.2 257 40.5
CAN.G13.10 Capsicum annuum HOM05D007404 ORTHO05D009281 3.1e-40 169.9 267 40.4
DCAR_013466 Daucus carota HOM05D007404 ORTHO05D009281 2.0e-39 167.2 226 45.6
Aqoxy1G00574 Aquilegia oxysepala HOM05D007404 ORTHO05D009281 1.7e-38 164.1 267 41.2
Nitab4.5_0012268g0010 Nicotiana tabacum HOM05D007404 ORTHO05D009281 3.8e-38 162.9 265 38.1
Sopen11g020730 Solanum pennellii HOM05D007404 ORTHO05D009281 3.8e-38 162.9 262 38.5
Nitab4.5_0000117g0060 Nicotiana tabacum HOM05D007404 ORTHO05D009281 8.4e-38 161.8 264 38.6
MSTRG.19336 Avicennia marina HOM05D007404 ORTHO05D009281 1.1e-37 161.4 241 41.9
Oeu063091.1 Olea europaea HOM05D007404 ORTHO05D009281 4.6e-36 156.0 232 41.4
Sc07g0007250 Simmondsia chinensis HOM05D007404 ORTHO05D009281 5.1e-35 152.5 294 35.4
ECA238G2201 Erigeron canadensis HOM05D007404 ORTHO05D009281 6.6e-35 152.1 221 43.4
Migut.J00747 Erythranthe guttata HOM05D007404 ORTHO05D009281 1.2e-33 147.9 267 37.1
AUR62036300 Chenopodium quinoa HOM05D007404 ORTHO05D009281 5.3e-32 142.5 279 36.2
AUR62038411 Chenopodium quinoa HOM05D007404 ORTHO05D009281 1.2e-31 141.4 278 36.0
SGA_v2.0_scaffold112G31676 Striga asiatica HOM05D007404 ORTHO05D009281 1.5e-31 141.0 223 39.0
THA.LOC104826786 Tarenaya hassleriana HOM05D007404 ORTHO05D009281 4.4e-31 139.4 270 36.3
Hund10780 Selenicereus undatus HOM05D007404 ORTHO05D009281 2.2e-30 137.1 274 35.0
EL10Ac5g11794 Beta vulgaris HOM05D007404 ORTHO05D009281 3.8e-30 136.3 263 38.0
MBI14_g28309_MAGBIO Magnolia biondii HOM05D007404 ORTHO05D009281 1.9e-29 134.0 307 32.9
Lsat_1_v5_gn_2_102100 Lactuca sativa HOM05D007404 ORTHO05D009281 5.4e-29 132.5 223 39.5
Ah.02g113930 Amaranthus hybridus HOM05D007404 ORTHO05D009281 4.6e-28 129.4 278 35.6
HanXRQChr14g0453181 Helianthus annuus HOM05D007404 ORTHO05D009281 8.7e-27 125.2 118 55.9
unitig_26.g9157 Utricularia gibba HOM05D000495 ORTHO05D009281 4.3e-26 122.9 227 34.8
ATR0686G215 Amborella trichopoda HOM05D007404 ORTHO05D009281 1.6e-25 120.9 312 32.4
BcaB06g25568 Brassica carinata HOM05D007404 ORTHO05D009281 1.4e-21 107.8 184 40.8
Carub.0003s1121 Capsella rubella HOM05D007404 ORTHO05D009281 1.4e-21 107.8 172 41.3
SEGI_39351 Sequoiadendron giganteum HOM05D007404 ORTHO05D009281 2.4e-21 107.1 90 60.0
Aa31LG3G5700 Aethionema arabicum HOM05D007404 ORTHO05D009281 1.2e-20 104.8 92 57.6
AT3G11890 Arabidopsis thaliana HOM05D007404 ORTHO05D009281 1.2e-20 104.8 172 40.1
Sp3g10090 Schrenkiella parvula HOM05D007404 ORTHO05D009281 2.3e-19 100.5 78 61.5
Zm00001eb170760 Zea mays HOM05D007404 ORTHO05D009281 3.9e-19 99.8 243 31.7
CARHR086420 Cardamine hirsuta HOM05D007404 ORTHO05D009281 5.1e-19 99.4 172 40.7
Thhalv10020684m.g Eutrema salsugineum HOM05D007404 ORTHO05D009281 6.7e-19 99.0 168 38.7
CDE09G0274 Ceratophyllum demersum HOM05D007404 ORTHO05D009281 8.7e-19 98.6 229 33.2
GSVIVG01022504001 Vitis vinifera HOM05D007404 ORTHO05D009281 1.1e-18 98.2 102 52.0
BcaC05g29316 Brassica carinata HOM05D007404 ORTHO05D009281 3.3e-18 96.7 78 59.0
A05p37490 Brassica napus HOM05D007404 ORTHO05D009281 3.3e-18 96.7 78 59.0
C05p56050 Brassica napus HOM05D007404 ORTHO05D009281 3.3e-18 96.7 78 59.0
BolC5t34272H Brassica oleracea HOM05D007404 ORTHO05D009281 3.3e-18 96.7 78 59.0
BraA05t22547Z Brassica rapa HOM05D007404 ORTHO05D009281 3.3e-18 96.7 78 59.0
HPP92_023288 Vanilla planifolia HOM05D007404 ORTHO05D009281 9.6e-18 95.1 80 53.8
Os08g0378800 Oryza sativa ssp. japonica HOM05D007404 ORTHO05D009281 4.8e-17 92.8 85 51.8
Mapoly0022s0106 Marchantia polymorpha HOM05D007404 ORTHO05D009281 6.0e-12 75.9 81 43.2
FAN14G2589 Fragaria x ananassa HOM05D007404 ORTHO05D009281 1.8e-11 74.3 164 40.2
AagrBONN_evm.TU.Sc2ySwM_340.357 Anthoceros agrestis HOM05D007404 ORTHO05D009281 1.5e-07 61.2 64 46.9
Aqoxy5G03199 Aquilegia oxysepala HOM05D002304 ORTHO05D002363 7.6e-07 58.9 67 49.3
AUR62005698 Chenopodium quinoa HOM05D002304 ORTHO05D002363 1.0e-06 58.5 71 46.5
AUR62028858 Chenopodium quinoa HOM05D002304 ORTHO05D002363 1.0e-06 58.5 71 46.5
Gohir.A03G055000 Gossypium hirsutum HOM05D002304 ORTHO05D002363 1.0e-06 58.5 157 28.7
HanXRQChr16g0502201 Helianthus annuus HOM05D002304 ORTHO05D002363 1.0e-06 58.5 107 32.7
Gohir.D03G111900 Gossypium hirsutum HOM05D002304 ORTHO05D002363 1.7e-06 57.8 157 30.6
Gorai.003G118200 Gossypium raimondii HOM05D002304 ORTHO05D002363 1.7e-06 57.8 157 30.6
CBR_g31169 Chara braunii HOM05D002304 ORTHO05D002363 2.2e-06 57.4 61 45.9
Sabra15G0123800 Salix brachista HOM05D002304 ORTHO05D002363 2.2e-06 57.4 139 30.9
Cc04_g08240 Coffea canephora HOM05D002304 ORTHO05D002363 2.9e-06 57.0 54 51.9
Ah.03g135680 Amaranthus hybridus HOM05D002304 ORTHO05D002363 4.9e-06 56.2 54 50.0
Hund25504 Selenicereus undatus HOM05D002304 ORTHO05D002363 4.9e-06 56.2 67 43.3
Phvul.008G018900 Phaseolus vulgaris HOM05D002304 ORTHO05D002363 6.5e-06 55.8 61 45.9
HPP92_021624 Vanilla planifolia HOM05D002304 ORTHO05D002363 6.5e-06 55.8 54 50.0
Aqoxy5G03200 Aquilegia oxysepala HOM05D002304 ORTHO05D002363 8.4e-06 55.5 67 46.3
CSS0042081 Camellia sinensis var. sinensis HOM05D002304 ORTHO05D002363 8.4e-06 55.5 66 47.0
QL10p020791 Quercus lobata HOM05D002304 ORTHO05D002363 8.4e-06 55.5 54 48.1


User provided reference genes

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