Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p025881 Quercus lobata HOM05D007071 ORTHO05D008677 9.9e-156 553.5 303 100.0
Cfa020101 Carpinus fangiana HOM05D007071 ORTHO05D008677 4.0e-104 382.1 304 67.8
CiPaw.09G025100 Carya illinoinensis HOM05D007071 ORTHO05D008677 1.4e-96 357.1 305 66.6
TWI77G0807 Tripterygium wilfordii HOM05D007071 ORTHO05D008677 4.9e-86 322.0 327 56.6
Manes.08G038400 Manihot esculenta HOM05D007071 ORTHO05D008677 2.0e-84 316.6 329 60.2
Nn2g14444 Nelumbo nucifera HOM05D007071 ORTHO05D008677 6.6e-83 311.6 326 55.5
Cpa.g.sc222.1 Carica papaya HOM05D007071 ORTHO05D008677 8.0e-81 304.7 326 55.5
Lj1g0020560 Lotus japonicus HOM05D007071 ORTHO05D008677 1.7e-78 297.0 322 54.7
Dinv25088 Davidia involucrata HOM05D007071 ORTHO05D008677 6.4e-78 295.0 304 55.6
Potri.016G064200 Populus trichocarpa HOM05D007071 ORTHO05D008677 1.9e-77 293.5 323 52.3
Atru.chr8.1251 Acer truncatum HOM05D007071 ORTHO05D008677 1.6e-76 290.4 301 55.5
PSO339G2219 Papaver somniferum HOM05D007071 ORTHO05D008677 6.0e-76 288.5 328 51.8
Glyma.19G203500 Glycine max HOM05D007071 ORTHO05D008677 1.0e-75 287.7 319 51.7
VMungo1383G1243 Vigna mungo HOM05D007071 ORTHO05D008677 1.3e-75 287.3 320 52.2
GSVIVG01022502001 Vitis vinifera HOM05D007071 ORTHO05D008677 1.3e-75 287.3 315 56.8
PGR004G1089 Punica granatum HOM05D007071 ORTHO05D008677 2.3e-75 286.6 320 52.8
Duzib093G1750 Durio zibethinus HOM05D007071 ORTHO05D008677 6.6e-75 285.0 328 53.0
Aqoxy2G00613 Aquilegia oxysepala HOM05D007071 ORTHO05D008677 5.6e-74 282.0 327 51.1
Haze_20090 Corylus avellana HOM05D007071 ORTHO05D008677 5.6e-74 282.0 241 63.9
Gorai.006G146400 Gossypium raimondii HOM05D007071 ORTHO05D008677 7.3e-74 281.6 332 50.6
FvH4_6g21190 Fragaria vesca HOM05D007071 ORTHO05D008677 1.2e-73 280.8 315 59.0
Glyma.03G206000 Glycine max HOM05D007071 ORTHO05D008677 1.6e-73 280.4 317 52.1
Actinidia37784 Actinidia chinensis HOM05D007071 ORTHO05D008677 6.2e-73 278.5 327 50.5
RcHm_v2.0_Chr3g0477671 Rosa chinensis HOM05D007071 ORTHO05D008677 1.1e-72 277.7 321 58.9
MELO3C009585.2 Cucumis melo HOM05D007071 ORTHO05D008677 4.0e-72 275.8 327 52.3
Gohir.D09G127800 Gossypium hirsutum HOM05D007071 ORTHO05D008677 4.0e-72 275.8 331 50.5
Prupe.7G088000 Prunus persica HOM05D007071 ORTHO05D008677 5.2e-72 275.4 327 56.0
CsaV3_3G038410 Cucumis sativus L. HOM05D007071 ORTHO05D008677 8.9e-72 274.6 327 52.0
Gohir.A09G131600 Gossypium hirsutum HOM05D007071 ORTHO05D008677 8.9e-72 274.6 331 49.8
MD14G1046200 Malus domestica HOM05D007071 ORTHO05D008677 8.9e-72 274.6 324 57.4
TPR.G14411 Trifolium pratense HOM05D007071 ORTHO05D008677 5.8e-71 271.9 271 58.3
MBI11_g24568_MAGBIO Magnolia biondii HOM05D007071 ORTHO05D008677 1.7e-70 270.4 369 47.4
Medtr7g107150 Medicago truncatula HOM05D007071 ORTHO05D008677 1.7e-70 270.4 303 55.4
Sabra16G0066300 Salix brachista HOM05D007071 ORTHO05D008677 1.9e-69 266.9 375 45.3
CANSAT64G1821 Cannabis sativa HOM05D007071 ORTHO05D008677 4.1e-69 265.8 334 50.0
THA.LOC104809942 Tarenaya hassleriana HOM05D007071 ORTHO05D008677 4.1e-69 265.8 324 49.1
vmacro07528 Vaccinium macrocarpon HOM05D007071 ORTHO05D008677 1.2e-68 264.2 340 49.4
Phvul.001G199700 Phaseolus vulgaris HOM05D007071 ORTHO05D008677 7.8e-68 261.5 316 50.0
Thhalv10014151m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 1.7e-67 260.4 321 48.0
Sp6g36270 Schrenkiella parvula HOM05D007071 ORTHO05D008677 3.9e-67 259.2 333 47.1
AL6G16680 Arabidopsis lyrata HOM05D007071 ORTHO05D008677 1.1e-66 257.7 322 47.2
AT5G06590 Arabidopsis thaliana HOM05D007071 ORTHO05D008677 5.6e-66 255.4 321 46.1
Sc01g0005210 Simmondsia chinensis HOM05D007071 ORTHO05D008677 9.5e-66 254.6 334 47.3
Sed0020351 Sechium edule HOM05D007071 ORTHO05D008677 2.8e-65 253.1 326 50.6
Aa31sc291G40 Aethionema arabicum HOM05D007071 ORTHO05D008677 6.2e-65 251.9 322 47.8
Rhsim03G0057500 Rhododendron simsii HOM05D007071 ORTHO05D008677 8.1e-65 251.5 290 51.0
ClCG10G017880 Citrullus lanatus HOM05D007071 ORTHO05D008677 2.4e-64 250.0 386 43.3
CARHR206610 Cardamine hirsuta HOM05D007071 ORTHO05D008677 3.1e-64 249.6 325 47.4
Psat3g026600 Pisum sativum HOM05D007071 ORTHO05D008677 3.1e-64 249.6 305 54.1
BolC9t59762H Brassica oleracea HOM05D007071 ORTHO05D008677 2.6e-63 246.5 327 45.0
C09p70180 Brassica napus HOM05D007071 ORTHO05D008677 5.8e-63 245.4 327 44.6
Carub.0006s0547 Capsella rubella HOM05D007071 ORTHO05D008677 5.8e-63 245.4 323 45.8
ECA248G1335 Erigeron canadensis HOM05D007071 ORTHO05D008677 9.9e-63 244.6 307 48.2
Lalb_Chr25g0287781 Lupinus albus HOM05D007071 ORTHO05D008677 2.9e-62 243.0 326 51.5
A10p29800 Brassica napus HOM05D007071 ORTHO05D008677 3.2e-61 239.6 327 44.0
HanXRQChr11g0347671 Helianthus annuus HOM05D007071 ORTHO05D008677 1.2e-60 237.7 307 46.3
SGA_v2.0_scaffold31G12809 Striga asiatica HOM05D007071 ORTHO05D008677 1.2e-60 237.7 303 46.9
Sopen01g021160 Solanum pennellii HOM05D007071 ORTHO05D008677 2.1e-60 236.9 308 50.6
BraA10t45019Z Brassica rapa HOM05D007071 ORTHO05D008677 3.5e-60 236.1 327 43.7
FAN09G1879 Fragaria x ananassa HOM05D007071 ORTHO05D008677 6.0e-60 235.3 295 54.6
FAN14G3447 Fragaria x ananassa HOM05D007071 ORTHO05D008677 5.1e-59 232.3 285 56.5
COL.COLO4_29462 Corchorus olitorius HOM05D007071 ORTHO05D008677 8.7e-59 231.5 263 52.9
Ciclev10012576m.g Citrus clementina HOM05D007071 ORTHO05D008677 2.5e-58 229.9 256 52.7
arahy.Tifrunner.gnm1.ann1.B8MRUG Arachis hypogaea HOM05D007071 ORTHO05D008677 4.3e-58 229.2 303 50.5
MSTRG.5919 Avicennia marina HOM05D007071 ORTHO05D008677 7.3e-58 228.4 310 45.8
Lsat_1_v5_gn_1_56481 Lactuca sativa HOM05D000137 ORTHO05D000503 1.2e-57 227.6 269 49.8
Thhalv10014358m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 3.6e-57 226.1 305 45.2
arahy.Tifrunner.gnm1.ann1.P13BQJ Arachis hypogaea HOM05D007071 ORTHO05D008677 8.1e-57 224.9 303 50.2
Migut.J00748 Erythranthe guttata HOM05D007071 ORTHO05D008677 1.2e-55 221.1 304 48.0
Peaxi162Scf00645g00018 Petunia axillaris HOM05D007071 ORTHO05D008677 4.9e-54 215.7 304 44.4
Peaxi162Scf00425g00036 Petunia axillaris HOM05D007071 ORTHO05D008677 6.4e-54 215.3 304 44.4
Hund10779 Selenicereus undatus HOM05D007071 ORTHO05D008677 5.1e-51 205.7 304 44.7
Nitab4.5_0000117g0100 Nicotiana tabacum HOM05D007071 ORTHO05D008677 1.1e-50 204.5 338 41.4
TAR633G1119 Trochodendron aralioides HOM05D007071 ORTHO05D008677 2.5e-50 203.4 187 58.3
Cc06_g07070 Coffea canephora HOM05D007071 ORTHO05D008677 3.3e-50 203.0 297 42.8
Ah.12g059560 Amaranthus hybridus HOM05D007071 ORTHO05D008677 7.3e-50 201.8 319 42.3
Solyc01g056990.3 Solanum lycopersicum HOM05D007071 ORTHO05D008677 7.6e-47 191.8 251 48.6
Eucgr.A02532 Eucalyptus grandis HOM05D007071 ORTHO05D008677 1.1e-45 188.0 186 58.6
ATR0697G054 Amborella trichopoda HOM05D007071 ORTHO05D008677 2.4e-45 186.8 358 38.0
Oeu028127.1 Olea europaea HOM05D007071 ORTHO05D008677 1.6e-44 184.1 244 46.3
EL10Ac5g11787 Beta vulgaris HOM05D007071 ORTHO05D008677 7.9e-44 181.8 291 41.9
Thecc.05G182200 Theobroma cacao HOM05D007071 ORTHO05D008677 3.9e-43 179.5 202 51.5
Peaxi162Scf00414g00006 Petunia axillaris HOM05D007071 ORTHO05D008677 1.5e-42 177.6 302 39.7
PGSC0003DMG400031498 Solanum tuberosum HOM05D007071 ORTHO05D008677 6.2e-41 172.2 273 42.5
SEGI_27522 Sequoiadendron giganteum HOM05D007071 ORTHO05D008677 4.0e-40 169.5 366 35.8
Nitab4.5_0005508g0020 Nicotiana tabacum HOM05D007071 ORTHO05D008677 1.2e-39 167.9 294 39.8
AUR62036298 Chenopodium quinoa HOM05D007071 ORTHO05D008677 3.9e-35 152.9 319 36.7
CSS0047921 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 1.5e-34 151.0 251 45.8
CDE10G1223 Ceratophyllum demersum HOM05D007071 ORTHO05D008677 5.6e-34 149.1 186 54.3
AUR62038410 Chenopodium quinoa HOM05D000573 ORTHO05D008677 1.3e-33 147.9 319 35.1
DCAR_020676 Daucus carota HOM05D007071 ORTHO05D008677 2.2e-30 137.1 182 46.7
Gorai.007G240500 Gossypium raimondii HOM05D007071 ORTHO05D008677 2.5e-26 123.6 183 45.9
Eucgr.C00285 Eucalyptus grandis HOM05D007071 ORTHO05D008677 7.4e-26 122.1 77 77.9
MD12G1047800 Malus domestica HOM05D007071 ORTHO05D008677 2.4e-24 117.1 91 69.2
Gohir.A06G128402 Gossypium hirsutum HOM05D007071 ORTHO05D008677 7.6e-23 112.1 162 41.4
Zm00001eb134480 Zea mays HOM05D007071 ORTHO05D008677 1.0e-22 111.7 263 33.1
AagrBONN_evm.TU.Sc2ySwM_117.1490 Anthoceros agrestis HOM05D007071 ORTHO05D008677 1.6e-20 104.4 308 28.2
Gohir.A07G089166 Gossypium hirsutum HOM05D007071 ORTHO05D008677 2.1e-20 104.0 75 68.0
SHI31768 Sapria himalayana HOM05D007071 ORTHO05D008677 2.1e-20 104.0 98 57.1
Eucgr.A02531 Eucalyptus grandis HOM05D007071 ORTHO05D008677 5.1e-19 99.4 74 71.6
TPR.G40805 Trifolium pratense HOM05D007071 ORTHO05D008677 8.2e-17 92.0 66 71.2
QL02p030777 Quercus lobata HOM05D007071 ORTHO05D008677 4.5e-15 86.3 47 85.1
Gohir.A07G056200 Gossypium hirsutum HOM05D007071 ORTHO05D008677 5.9e-15 85.9 123 41.5
CSS0001330 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 1.3e-14 84.7 60 63.3
Pp3c26_10880 Physcomitrium patens HOM05D007071 ORTHO05D008677 2.5e-13 80.5 365 22.7
SMO165G0174 Selaginella moellendorffii HOM05D007071 ORTHO05D008677 9.4e-13 78.6 322 25.5
CiPaw.16G104200 Carya illinoinensis HOM05D007071 ORTHO05D008677 6.1e-12 75.9 66 63.6
Mapoly0045s0075 Marchantia polymorpha HOM05D007071 ORTHO05D008677 6.7e-11 72.4 384 25.3
Pp3c4_24350 Physcomitrium patens HOM05D007071 ORTHO05D008677 3.7e-09 66.6 360 23.6
Os12g0623400 Oryza sativa ssp. japonica HOM05D007071 ORTHO05D008677 6.3e-09 65.9 75 49.3
Actinidia03957 Actinidia chinensis HOM05D002116 ORTHO05D002438 8.2e-09 65.5 41 75.6
PGSC0003DMG400019076 Solanum tuberosum HOM05D007071 ORTHO05D008677 1.2e-07 61.6 70 51.4


User provided reference genes

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