Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p025833 Quercus lobata HOM05D005267 ORTHO05D006303 5.0e-137 491.1 249 100.0
Cfa020104 Carpinus fangiana HOM05D005267 ORTHO05D006303 4.4e-93 345.1 253 71.9
Haze_20086 Corylus avellana HOM05D005267 ORTHO05D006303 3.7e-92 342.0 250 71.6
Cpa.g.sc85.6 Carica papaya HOM05D005267 ORTHO05D006303 4.9e-92 341.7 234 71.4
CANSAT64G2985 Cannabis sativa HOM05D005267 ORTHO05D006303 6.0e-90 334.7 254 68.5
COL.COLO4_29458 Corchorus olitorius HOM05D005267 ORTHO05D006303 1.0e-89 334.0 250 68.8
Atru.chr8.1242 Acer truncatum HOM05D005267 ORTHO05D006303 3.3e-88 328.9 247 68.4
Thecc.05G181400 Theobroma cacao HOM05D005267 ORTHO05D006303 4.3e-88 328.6 251 68.5
Actinidia37788 Actinidia chinensis HOM05D005267 ORTHO05D006303 1.2e-87 327.0 238 68.5
ECA248G0309 Erigeron canadensis HOM05D005267 ORTHO05D006303 1.6e-87 326.6 239 68.6
Duzib128G1921 Durio zibethinus HOM05D005267 ORTHO05D006303 2.1e-87 326.2 252 67.9
Ciclev10012610m.g Citrus clementina HOM05D005267 ORTHO05D006303 4.7e-87 325.1 247 66.8
Cc06_g07120 Coffea canephora HOM05D005267 ORTHO05D006303 4.7e-87 325.1 235 68.9
MELO3C024594.2 Cucumis melo HOM05D005267 ORTHO05D006303 4.7e-87 325.1 247 67.6
CiPaw.10G022300 Carya illinoinensis HOM05D005267 ORTHO05D006303 1.4e-86 323.6 223 72.6
Lsat_1_v5_gn_1_56341 Lactuca sativa HOM05D005267 ORTHO05D006303 1.4e-86 323.6 230 70.4
TWI77G0597 Tripterygium wilfordii HOM05D005267 ORTHO05D006303 2.3e-86 322.8 249 67.5
CsaV3_6G041190 Cucumis sativus L. HOM05D005267 ORTHO05D006303 3.1e-86 322.4 247 67.6
Nitab4.5_0006454g0020 Nicotiana tabacum HOM05D005267 ORTHO05D006303 3.1e-86 322.4 231 69.7
ClCG01G015080 Citrullus lanatus HOM05D005267 ORTHO05D006303 2.0e-85 319.7 247 67.6
Nitab4.5_0008653g0020 Nicotiana tabacum HOM05D005267 ORTHO05D006303 2.6e-85 319.3 227 70.5
Lj5g0006264 Lotus japonicus HOM05D005267 ORTHO05D006303 4.4e-85 318.5 252 65.5
Rhsim03G0057300 Rhododendron simsii HOM05D005267 ORTHO05D006303 4.4e-85 318.5 227 70.9
TPR.G30771 Trifolium pratense HOM05D005267 ORTHO05D006303 7.5e-85 317.8 254 64.2
HanXRQChr01g0026301 Helianthus annuus HOM05D005267 ORTHO05D006303 1.3e-84 317.0 249 65.1
PGR142G1416 Punica granatum HOM05D005267 ORTHO05D006303 1.7e-84 316.6 250 66.4
Ca_18103_v3 Cicer arietinum L. HOM05D005267 ORTHO05D006303 2.9e-84 315.8 249 64.7
FAN02G1071 Fragaria x ananassa HOM05D005267 ORTHO05D006303 2.9e-84 315.8 246 63.8
Oeu063094.3 Olea europaea HOM05D005267 ORTHO05D006303 2.9e-84 315.8 220 70.5
CSS0044429 Camellia sinensis var. sinensis HOM05D005267 ORTHO05D006303 4.9e-84 315.1 248 65.7
Psat6g110480 Pisum sativum HOM05D005267 ORTHO05D006303 4.9e-84 315.1 249 62.7
arahy.Tifrunner.gnm1.ann1.3RXG3F Arachis hypogaea HOM05D005267 ORTHO05D006303 1.4e-83 313.5 257 62.3
Medtr1g054315 Medicago truncatula HOM05D005267 ORTHO05D006303 1.4e-83 313.5 247 64.8
Eucgr.A02521 Eucalyptus grandis HOM05D005267 ORTHO05D006303 3.2e-83 312.4 227 70.9
Nn6g32442 Nelumbo nucifera HOM05D005267 ORTHO05D006303 3.2e-83 312.4 241 66.4
THA.LOC104821240 Tarenaya hassleriana HOM05D005267 ORTHO05D006303 3.2e-83 312.4 229 67.2
Sopen10g032100 Solanum pennellii HOM05D005267 ORTHO05D006303 5.4e-83 311.6 234 66.7
FvH4_6g21270 Fragaria vesca HOM05D005267 ORTHO05D006303 7.1e-83 311.2 246 63.8
Solyc10g081590.2 Solanum lycopersicum HOM05D005267 ORTHO05D006303 7.1e-83 311.2 234 66.7
FAN05G1850 Fragaria x ananassa HOM05D005267 ORTHO05D006303 1.2e-82 310.5 246 63.0
RcHm_v2.0_Chr3g0477741 Rosa chinensis HOM05D005267 ORTHO05D006303 1.6e-82 310.1 246 63.4
RcHm_v2.0_Chr3g0477781 Rosa chinensis HOM05D005267 ORTHO05D006303 1.6e-82 310.1 246 63.4
FAN14G1206 Fragaria x ananassa HOM05D005267 ORTHO05D006303 4.6e-82 308.5 246 63.0
PGSC0003DMG400028129 Solanum tuberosum HOM05D005267 ORTHO05D006303 4.6e-82 308.5 234 65.8
Eucgr.A02526 Eucalyptus grandis HOM05D005267 ORTHO05D006303 6.0e-82 308.1 222 70.3
arahy.Tifrunner.gnm1.ann1.H25EQ1 Arachis hypogaea HOM05D005267 ORTHO05D006303 7.8e-82 307.8 257 61.1
Sed0012434 Sechium edule HOM05D005267 ORTHO05D006303 1.0e-81 307.4 219 69.4
Prupe.7G087000 Prunus persica HOM05D005267 ORTHO05D006303 1.7e-81 306.6 241 64.3
GSVIVG01022470001 Vitis vinifera HOM05D005267 ORTHO05D006303 3.0e-81 305.8 215 69.8
Lalb_Chr21g0316191 Lupinus albus HOM05D005267 ORTHO05D006303 8.6e-81 304.3 250 63.6
MD14G1048200 Malus domestica HOM05D005267 ORTHO05D006303 8.6e-81 304.3 250 63.6
PSO384G1433 Papaver somniferum HOM05D005267 ORTHO05D006303 1.1e-80 303.9 220 69.1
SGA_v2.0_scaffold41G15783 Striga asiatica HOM05D005267 ORTHO05D006303 1.5e-80 303.5 244 62.7
Migut.L01860 Erythranthe guttata HOM05D005267 ORTHO05D006303 2.5e-80 302.8 232 65.1
Lalb_Chr02g0153991 Lupinus albus HOM05D005267 ORTHO05D006303 2.5e-80 302.8 246 65.0
TAR623G0682 Trochodendron aralioides HOM05D005267 ORTHO05D006303 3.3e-80 302.4 237 65.0
FAN05G5707 Fragaria x ananassa HOM05D005267 ORTHO05D006303 1.2e-79 300.4 260 59.2
MBI05_g37655_MAGBIO Magnolia biondii HOM05D005267 ORTHO05D006303 1.6e-79 300.1 232 65.5
unitig_899.g15196 Utricularia gibba HOM05D005267 ORTHO05D006303 1.6e-79 300.1 226 65.5
Glyma.09G103300 Glycine max HOM05D005267 ORTHO05D006303 2.1e-79 299.7 247 62.3
BraA09t40549Z Brassica rapa HOM05D005267 ORTHO05D006303 2.8e-79 299.3 230 65.7
Aqoxy1G00565 Aquilegia oxysepala HOM05D005267 ORTHO05D006303 1.1e-78 297.4 223 68.6
Glyma.02G167800 Glycine max HOM05D005267 ORTHO05D006303 1.4e-78 297.0 248 62.1
Carub.0005s2521 Capsella rubella HOM05D005267 ORTHO05D006303 3.1e-78 295.8 229 65.5
Zm00001eb057270 Zea mays HOM05D005267 ORTHO05D006303 3.1e-78 295.8 231 64.1
CARHR168860 Cardamine hirsuta HOM05D005267 ORTHO05D006303 4.0e-78 295.4 228 64.5
Thhalv10006199m.g Eutrema salsugineum HOM05D005267 ORTHO05D006303 2.6e-77 292.7 230 63.9
Sp5g04410 Schrenkiella parvula HOM05D005267 ORTHO05D006303 5.8e-77 291.6 232 64.2
AT3G58470 Arabidopsis thaliana HOM05D005267 ORTHO05D006303 1.3e-76 290.4 250 60.4
Sabra16G0066000 Salix brachista HOM05D005267 ORTHO05D006303 1.3e-76 290.4 249 61.0
Os03g0749900 Oryza sativa ssp. japonica HOM05D005267 ORTHO05D006303 1.7e-76 290.0 231 64.1
Phvul.007G264300 Phaseolus vulgaris HOM05D005267 ORTHO05D006303 4.9e-76 288.5 249 59.8
Potri.016G063600 Populus trichocarpa HOM05D005267 ORTHO05D006303 6.4e-76 288.1 249 60.6
AL5G40230 Arabidopsis lyrata HOM05D005267 ORTHO05D006303 1.1e-75 287.3 250 60.4
DCAR_013470 Daucus carota HOM05D006729 ORTHO05D008502 1.1e-75 287.3 218 66.1
BcaC07g40203 Brassica carinata HOM05D005267 ORTHO05D006303 1.4e-75 287.0 231 63.2
VMungo0720G2658 Vigna mungo HOM05D005267 ORTHO05D006303 1.4e-75 287.0 249 59.4
BcaC07g40256 Brassica carinata HOM05D005267 ORTHO05D006303 1.9e-75 286.6 222 64.9
Aa31LG10G13030 Aethionema arabicum HOM05D006729 ORTHO05D008502 9.2e-75 284.3 237 62.4
Lj1A1066G52 Lonicera japonica HOM05D005267 ORTHO05D006303 1.6e-74 283.5 233 65.2
AUR62036286 Chenopodium quinoa HOM05D005267 ORTHO05D006303 1.7e-73 280.0 233 60.9
A09p51030 Brassica napus HOM05D006729 ORTHO05D008502 8.7e-73 277.7 226 63.3
C08p33850 Brassica napus HOM05D006729 ORTHO05D008502 3.3e-72 275.8 227 62.6
BolC8t50983H Brassica oleracea HOM05D006729 ORTHO05D008502 3.3e-72 275.8 227 62.6
AUR62039735 Chenopodium quinoa HOM05D005267 ORTHO05D006303 9.6e-72 274.2 250 58.0
Hund15032 Selenicereus undatus HOM05D005267 ORTHO05D006303 9.6e-72 274.2 224 62.1
CDE05G1441 Ceratophyllum demersum HOM05D005267 ORTHO05D006303 1.4e-70 270.4 248 59.3
EL10Ac5g11779 Beta vulgaris HOM05D005267 ORTHO05D006303 2.4e-70 269.6 232 59.5
Peaxi162Scf00060g01112 Petunia axillaris HOM05D005267 ORTHO05D006303 9.0e-70 267.7 237 62.4
ATR0697G123 Amborella trichopoda HOM05D006729 ORTHO05D008502 7.1e-67 258.1 223 58.3
Gorai.006G146100 Gossypium raimondii HOM05D005267 ORTHO05D006303 1.0e-65 254.2 254 56.3
Gohir.A09G131300 Gossypium hirsutum HOM05D005267 ORTHO05D006303 3.9e-65 252.3 237 57.4
Dinv11912 Davidia involucrata HOM05D005267 ORTHO05D006303 9.9e-61 237.7 210 61.0
Pp3c20_23410 Physcomitrium patens HOM05D005267 ORTHO05D006303 1.1e-59 234.2 237 53.2
Mapoly0207s0006 Marchantia polymorpha HOM05D005267 ORTHO05D006303 7.1e-59 231.5 230 50.9
Sc01g0005180 Simmondsia chinensis HOM05D005267 ORTHO05D006303 2.1e-55 219.9 203 58.1
vmacro07530 Vaccinium macrocarpon HOM05D005267 ORTHO05D006303 8.1e-55 218.0 123 82.9
CAN.G128.157 Capsicum annuum HOM05D005267 ORTHO05D006303 1.2e-53 214.2 124 76.6
Hund24299 Selenicereus undatus HOM05D005267 ORTHO05D006303 7.1e-51 204.9 125 72.8
Hund24301 Selenicereus undatus HOM05D005267 ORTHO05D006303 7.1e-51 204.9 125 72.8
BcaC07g40255 Brassica carinata HOM05D005267 ORTHO05D006303 1.0e-49 201.1 186 57.0
Zm00001eb155770 Zea mays HOM05D000737 ORTHO05D006303 1.0e-49 201.1 202 54.0
Zm00001eb307210 Zea mays HOM05D005267 ORTHO05D006303 2.1e-47 193.4 195 55.4
Gohir.D09G127600 Gossypium hirsutum HOM05D005267 ORTHO05D006303 1.1e-46 191.0 162 61.1
Gohir.D09G127100 Gossypium hirsutum HOM05D005267 ORTHO05D006303 3.1e-46 189.5 161 60.9
Manes.08G038900 Manihot esculenta HOM05D005267 ORTHO05D006303 1.3e-44 184.1 178 57.9
Rhsim03G0057000 Rhododendron simsii HOM05D005267 ORTHO05D006303 6.5e-44 181.8 151 64.2
Zm00001eb020160 Zea mays HOM05D005267 ORTHO05D006303 3.0e-41 172.9 104 76.0
CBR_g551 Chara braunii HOM05D005267 ORTHO05D006303 1.9e-40 170.2 259 37.1
BolC4t23005H Brassica oleracea HOM05D005267 ORTHO05D006303 1.1e-38 164.5 137 58.4
SEGI_05913 Sequoiadendron giganteum HOM05D005267 ORTHO05D006303 2.9e-36 156.4 183 48.6
AagrBONN_evm.TU.Sc2ySwM_344.4688 Anthoceros agrestis HOM05D005267 ORTHO05D006303 4.2e-35 152.5 153 49.7
C04p14160 Brassica napus HOM05D005267 ORTHO05D006303 6.1e-34 148.7 120 60.0
arahy.Tifrunner.gnm1.ann1.TFGA9S Arachis hypogaea HOM05D005267 ORTHO05D006303 1.0e-33 147.9 109 66.1
Zm00001eb298070 Zea mays HOM05D005267 ORTHO05D006303 4.3e-32 142.5 140 53.6
Gorai.011G111300 Gossypium raimondii HOM05D005267 ORTHO05D006303 9.7e-32 141.4 77 85.7
Gorai.001G205400 Gossypium raimondii HOM05D005267 ORTHO05D006303 1.1e-30 137.9 77 81.8
Gorai.013G089700 Gossypium raimondii HOM05D005267 ORTHO05D006303 1.1e-30 137.9 77 83.1
Gohir.D12G044850 Gossypium hirsutum HOM05D005267 ORTHO05D006303 1.4e-30 137.5 76 85.5
Gohir.D03G023232 Gossypium hirsutum HOM05D005267 ORTHO05D006303 3.1e-30 136.3 77 84.4
Gohir.A01G123000 Gossypium hirsutum HOM05D005267 ORTHO05D006303 5.3e-30 135.6 77 83.1
Gohir.A06G056200 Gossypium hirsutum HOM05D005267 ORTHO05D006303 5.3e-30 135.6 77 83.1
Gohir.D08G106200 Gossypium hirsutum HOM05D005267 ORTHO05D006303 9.1e-30 134.8 76 84.2
Gohir.D11G259301 Gossypium hirsutum HOM05D005267 ORTHO05D006303 9.1e-30 134.8 76 84.2
Zm00001eb334640 Zea mays HOM05D005267 ORTHO05D006303 1.5e-21 107.5 79 63.3
Zm00001eb096050 Zea mays HOM05D005267 ORTHO05D006303 4.5e-21 105.9 125 48.8
MSTRG.10424 Avicennia marina HOM05D005267 ORTHO05D006303 6.5e-20 102.1 102 56.9
arahy.Tifrunner.gnm1.ann1.74GVQ2 Arachis hypogaea HOM05D005267 ORTHO05D006303 8.5e-20 101.7 66 68.2
Rhsim03G0056100 Rhododendron simsii HOM05D000045 ORTHO05D006303 2.5e-19 100.1 100 57.0
Gohir.D06G067600 Gossypium hirsutum HOM05D003508 ORTHO05D006303 3.6e-18 96.3 83 62.7
HPP92_004175 Vanilla planifolia HOM05D002029 ORTHO05D002158 6.7e-17 92.0 99 50.5
BcaB02g08262 Brassica carinata HOM05D005267 ORTHO05D006303 5.7e-16 89.0 101 50.5
Gohir.D06G044601 Gossypium hirsutum HOM05D003508 ORTHO05D006303 5.7e-16 89.0 47 83.0
A04p02570 Brassica napus HOM05D005267 ORTHO05D006303 3.7e-15 86.3 75 60.0
arahy.Tifrunner.gnm1.ann1.HYSL0N Arachis hypogaea HOM05D005267 ORTHO05D006303 2.4e-14 83.6 79 51.9
Gorai.011G067100 Gossypium raimondii HOM05D005267 ORTHO05D006303 3.1e-14 83.2 51 72.5
ClCG03G011770 Citrullus lanatus HOM05D000002 ORTHO05D015610 5.3e-14 82.4 50 70.0
Glyma.03G214201 Glycine max HOM05D005267 ORTHO05D006303 1.0e-12 78.2 86 46.5
arahy.Tifrunner.gnm1.ann1.PYJ9JQ Arachis hypogaea HOM05D005267 ORTHO05D006303 1.3e-12 77.8 67 58.2
Cfa022098 Carpinus fangiana HOM05D005267 ORTHO05D125748 2.2e-12 77.0 181 30.4
BolC9t56010H Brassica oleracea HOM05D008384 ORTHO05D042359 7.2e-11 72.0 67 50.7
Pp3c20_11400 Physcomitrium patens HOM05D005267 ORTHO05D006303 1.4e-09 67.8 176 25.0
VMungo0464G2161 Vigna mungo HOM05D005267 ORTHO05D006303 2.3e-09 67.0 45 62.2
Cre10.g418700 Chlamydomonas reinhardtii HOM05D005267 ORTHO05D006303 2.0e-08 63.9 177 27.7
Pp3c8_10880 Physcomitrium patens HOM05D005267 ORTHO05D006303 2.6e-08 63.5 212 23.6
arahy.Tifrunner.gnm1.ann1.4NE9EM Arachis hypogaea HOM05D005267 ORTHO05D006303 4.8e-07 59.3 34 70.6
FvH4_6g21293 Fragaria vesca HOM05D005267 ORTHO05D006303 8.2e-07 58.5 35 71.4
MCO14G360 Micromonas commoda HOM05D005267 ORTHO05D006303 1.1e-06 58.2 167 25.7


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