Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p025011 Quercus lobata HOM05D007176 ORTHO05D009050 5.0e-143 511.5 349 100.0
Cfa020128 Carpinus fangiana HOM05D007176 ORTHO05D009050 1.3e-122 443.7 349 67.0
CiPaw.09G027300 Carya illinoinensis HOM05D007176 ORTHO05D009050 1.3e-119 433.7 349 87.7
Dinv16365 Davidia involucrata HOM05D007176 ORTHO05D009050 1.8e-113 413.3 345 74.5
RcHm_v2.0_Chr3g0478871 Rosa chinensis HOM05D007176 ORTHO05D009050 3.2e-113 412.5 347 74.9
Thecc.05G178200 Theobroma cacao HOM05D007176 ORTHO05D009050 7.0e-113 411.4 349 71.9
Manes.09G039600 Manihot esculenta HOM05D007176 ORTHO05D009050 1.2e-112 410.6 348 82.2
Duzib106G0399 Durio zibethinus HOM05D007176 ORTHO05D009050 2.7e-112 409.5 349 73.1
FvH4_6g21620 Fragaria vesca HOM05D007176 ORTHO05D009050 2.3e-111 406.4 347 82.1
FAN02G0922 Fragaria x ananassa HOM05D007176 ORTHO05D009050 2.3e-111 406.4 347 82.1
FAN14G2546 Fragaria x ananassa HOM05D007176 ORTHO05D009050 1.9e-110 403.3 347 81.8
FAN09G2372 Fragaria x ananassa HOM05D007176 ORTHO05D009050 9.5e-110 401.0 347 81.0
TAR633G1141 Trochodendron aralioides HOM05D007176 ORTHO05D009050 1.0e-108 397.5 348 82.8
Nn2g15783 Nelumbo nucifera HOM05D007176 ORTHO05D009050 6.8e-108 394.8 348 76.4
TAR633G0683 Trochodendron aralioides HOM05D007176 ORTHO05D009050 1.2e-107 394.0 348 82.2
Eucgr.K01865 Eucalyptus grandis HOM05D007176 ORTHO05D009050 1.7e-106 390.2 348 81.0
Hma1.2p1_0645F.1_g194890 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 1.7e-106 390.2 349 81.1
Prupe.7G084400 Prunus persica HOM05D007176 ORTHO05D009050 2.9e-106 389.4 347 83.0
FAN05G5781 Fragaria x ananassa HOM05D007176 ORTHO05D009050 4.9e-106 388.7 353 79.6
Gohir.A04G053500 Gossypium hirsutum HOM05D007176 ORTHO05D009050 1.1e-105 387.5 349 71.1
Migut.K00028 Erythranthe guttata HOM05D007176 ORTHO05D009050 1.9e-105 386.7 347 80.1
Lju124C23T17 Lonicera japonica HOM05D007176 ORTHO05D009050 2.4e-105 386.3 331 84.3
GSVIVG01033441001 Vitis vinifera HOM05D007176 ORTHO05D009050 2.5e-102 376.3 332 79.5
Lj5g0009846 Lotus japonicus HOM05D007176 ORTHO05D009050 1.4e-100 370.5 342 79.8
Aa31LG10G13110 Aethionema arabicum HOM05D007176 ORTHO05D009050 5.2e-100 368.6 345 70.1
Potri.006G195800 Populus trichocarpa HOM05D007176 ORTHO05D009050 1.2e-99 367.5 341 80.4
EL10Ac3g06857 Beta vulgaris HOM05D007176 ORTHO05D009050 2.0e-99 366.7 348 76.1
BcaC07g40246 Brassica carinata HOM05D007176 ORTHO05D009050 2.6e-99 366.3 345 69.6
ECA247G1245 Erigeron canadensis HOM05D007176 ORTHO05D009050 7.5e-99 364.8 349 77.7
HanXRQChr10g0300591 Helianthus annuus HOM05D007176 ORTHO05D009050 3.7e-98 362.5 351 77.2
arahy.Tifrunner.gnm1.ann1.5B5G66 Arachis hypogaea HOM05D007176 ORTHO05D009050 6.4e-98 361.7 360 74.7
Haze_20048 Corylus avellana HOM05D007176 ORTHO05D009050 1.9e-97 360.1 381 55.4
Haze_20055 Corylus avellana HOM05D007176 ORTHO05D009050 1.9e-97 360.1 381 55.4
Cpa.g.sc85.35 Carica papaya HOM05D007176 ORTHO05D009050 1.6e-96 357.1 347 77.5
A09p51090 Brassica napus HOM05D007176 ORTHO05D009050 3.5e-96 355.9 369 64.8
CANSAT64G0938 Cannabis sativa HOM05D007176 ORTHO05D009050 6.0e-96 355.1 348 74.4
THA.LOC104802720 Tarenaya hassleriana HOM05D007176 ORTHO05D009050 7.8e-96 354.8 346 65.9
MD12G1053200 Malus domestica HOM05D007176 ORTHO05D009050 1.7e-95 353.6 348 76.7
MD14G1051600 Malus domestica HOM05D007176 ORTHO05D009050 1.5e-94 350.5 349 67.9
Rhsim04G0094400 Rhododendron simsii HOM05D007176 ORTHO05D009050 3.3e-94 349.4 345 76.5
arahy.Tifrunner.gnm1.ann1.I5CDLA Arachis hypogaea HOM05D007176 ORTHO05D009050 9.5e-94 347.8 377 70.8
Sabra06G0150500 Salix brachista HOM05D007176 ORTHO05D009050 2.8e-93 346.3 349 75.4
TPR.G19346 Trifolium pratense HOM05D007176 ORTHO05D009050 4.7e-93 345.5 371 74.4
Sc13g0002490 Simmondsia chinensis HOM05D007176 ORTHO05D009050 2.3e-92 343.2 346 66.2
SalBow1G6257 Salvia bowleyana HOM05D007176 ORTHO05D009050 1.2e-91 340.9 357 73.7
C08p33910 Brassica napus HOM05D007176 ORTHO05D009050 4.4e-91 339.0 345 66.1
CSS0044198 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 3.2e-89 332.8 345 74.5
PGR142G3952 Punica granatum HOM05D007176 ORTHO05D009050 3.5e-88 329.3 347 72.3
MBI01_g44281_MAGBIO Magnolia biondii HOM05D007176 ORTHO05D009050 1.7e-87 327.0 330 55.8
CDE04G3485 Ceratophyllum demersum HOM05D007176 ORTHO05D009050 1.5e-86 323.9 348 71.0
Peaxi162Scf00258g00925 Petunia axillaris HOM05D007176 ORTHO05D009050 4.3e-86 322.4 349 73.6
CAN.G111.5 Capsicum annuum HOM05D007176 ORTHO05D009050 3.6e-85 319.3 348 73.9
Thhalv10006065m.g Eutrema salsugineum HOM05D007176 ORTHO05D009050 6.2e-85 318.5 345 70.4
CARHR168930 Cardamine hirsuta HOM05D007176 ORTHO05D009050 1.4e-84 317.4 345 63.2
Sopen06g001340 Solanum pennellii HOM05D007176 ORTHO05D009050 1.4e-84 317.4 344 67.2
Medtr1g054625 Medicago truncatula HOM05D007176 ORTHO05D009050 4.0e-84 315.8 351 73.5
PGSC0003DMG400029168 Solanum tuberosum HOM05D007176 ORTHO05D009050 5.2e-84 315.5 344 74.1
AL5G40300 Arabidopsis lyrata HOM05D007176 ORTHO05D009050 1.5e-83 313.9 345 69.0
vmacro22113 Vaccinium macrocarpon HOM05D007176 ORTHO05D009050 7.6e-83 311.6 359 50.4
Cc06_g15630 Coffea canephora HOM05D007176 ORTHO05D009050 1.7e-82 310.5 353 72.0
Carub.0005s2528 Capsella rubella HOM05D007176 ORTHO05D009050 1.9e-81 307.0 345 68.7
Solyc06g005380.3 Solanum lycopersicum HOM05D007176 ORTHO05D009050 1.9e-81 307.0 344 73.0
Os02g0281150 Oryza sativa ssp. japonica HOM05D007176 ORTHO05D009050 1.2e-80 304.3 348 65.5
Sp5g04340 Schrenkiella parvula HOM05D007176 ORTHO05D009050 3.5e-80 302.8 345 58.8
COL.COLO4_29390 Corchorus olitorius HOM05D007176 ORTHO05D009050 1.0e-79 301.2 327 65.7
Actinidia17284 Actinidia chinensis HOM05D007176 ORTHO05D009050 1.3e-79 300.8 349 65.0
Glyma.09G105500 Glycine max HOM05D007176 ORTHO05D009050 1.7e-79 300.4 353 71.4
AT3G58530 Arabidopsis thaliana HOM05D007176 ORTHO05D009050 3.9e-79 299.3 345 67.0
Ca_03573_v3 Cicer arietinum L. HOM05D007176 ORTHO05D009050 6.6e-79 298.5 346 71.7
Lalb_Chr02g0153821 Lupinus albus HOM05D007176 ORTHO05D009050 8.7e-79 298.1 345 71.0
Gohir.D04G094700 Gossypium hirsutum HOM05D007176 ORTHO05D009050 4.3e-78 295.8 276 74.6
Hma1.2p1_0645F.1_g194900 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 1.3e-77 294.3 292 81.2
CSS0035640 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 6.2e-77 292.0 345 70.1
DCAR_019856 Daucus carota HOM05D007176 ORTHO05D009050 1.4e-76 290.8 327 51.4
AUR62032747 Chenopodium quinoa HOM05D007176 ORTHO05D009050 1.8e-76 290.4 322 71.7
Aqoxy279s002 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 4.9e-74 282.3 347 70.3
Aqoxy2G00051 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 4.9e-74 282.3 347 70.3
Gorai.009G392400 Gossypium raimondii HOM05D007176 ORTHO05D009050 1.1e-73 281.2 323 67.2
Atru.BG.213.p Acer truncatum HOM05D007176 ORTHO05D009050 1.4e-73 280.8 342 71.1
Nitab4.5_0008255g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 3.5e-72 276.2 345 46.4
BolC8t50987H Brassica oleracea HOM05D000032 ORTHO05D001620 1.8e-71 273.9 276 69.9
PSO541G4948 Papaver somniferum HOM05D007176 ORTHO05D009050 3.0e-71 273.1 290 76.6
Lsat_1_v5_gn_9_26900 Lactuca sativa HOM05D007176 ORTHO05D009050 2.1e-69 266.9 355 52.4
Ah.13g075580 Amaranthus hybridus HOM05D007176 ORTHO05D009050 6.2e-69 265.4 286 76.2
PSO675G7508 Papaver somniferum HOM05D007176 ORTHO05D009050 2.3e-63 246.9 290 66.6
Zm00001eb237210 Zea mays HOM05D007176 ORTHO05D009050 1.5e-62 244.2 349 61.6
HPP92_010126 Vanilla planifolia HOM05D007176 ORTHO05D009050 9.6e-62 241.5 291 72.5
VMungo0720G0788 Vigna mungo HOM05D007176 ORTHO05D009050 6.2e-61 238.8 405 44.7
BraA09t40553Z Brassica rapa HOM05D000032 ORTHO05D001620 2.0e-59 233.8 277 62.8
BcaC02g10014 Brassica carinata HOM05D007176 ORTHO05D009050 1.9e-57 227.3 295 66.8
SGA_v2.0_scaffold274G46490 Striga asiatica HOM05D007176 ORTHO05D009050 1.6e-53 214.2 137 75.2
Psat6g088000 Pisum sativum HOM05D007176 ORTHO05D009050 3.7e-53 213.0 296 70.3
Ciclev10012430m.g Citrus clementina HOM05D007176 ORTHO05D009050 1.8e-52 210.7 146 70.5
BolC4t24963H Brassica oleracea HOM05D000032 ORTHO05D001620 5.3e-52 209.1 276 68.1
C04p33960 Brassica napus HOM05D007176 ORTHO05D009050 3.4e-51 206.5 276 68.1
unitig_736.g22301 Utricularia gibba HOM05D007176 ORTHO05D009050 2.2e-50 203.8 405 54.3
SEGI_09769 Sequoiadendron giganteum HOM05D007176 ORTHO05D009050 2.9e-50 203.4 289 68.2
Nitab4.5_0000009g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 3.8e-50 203.0 414 34.8
SMO118G0524 Selaginella moellendorffii HOM05D007176 ORTHO05D009050 6.7e-47 192.2 338 51.8
Atru.chr8.1185 Acer truncatum HOM05D007176 ORTHO05D009050 3.7e-45 186.4 260 73.1
Pp3c23_2930 Physcomitrium patens HOM05D007176 ORTHO05D009050 1.1e-44 184.9 348 49.4
Phvul.007G261900 Phaseolus vulgaris HOM05D007176 ORTHO05D009050 3.1e-44 183.3 293 67.9
arahy.Tifrunner.gnm1.ann1.0S64XP Arachis hypogaea HOM05D007176 ORTHO05D009050 6.1e-40 169.1 276 48.6
Hund24823 Selenicereus undatus HOM05D007176 ORTHO05D009050 6.1e-40 169.1 115 68.7
AagrBONN_evm.TU.Sc2ySwM_228.1251 Anthoceros agrestis HOM05D007176 ORTHO05D009050 1.7e-37 161.0 345 50.7
A04p02540 Brassica napus HOM05D000032 ORTHO05D001620 1.5e-30 137.9 293 35.2
HanXRQChr05g0140621 Helianthus annuus HOM05D007176 ORTHO05D009050 2.6e-30 137.1 106 67.0
HanXRQChr10g0316231 Helianthus annuus HOM05D007176 ORTHO05D009050 2.6e-30 137.1 106 67.0
ATR0001G043 Amborella trichopoda HOM05D007176 ORTHO05D009050 5.3e-28 129.4 87 71.3
Hund24819 Selenicereus undatus HOM05D007176 ORTHO05D001610 9.1e-28 128.6 121 55.4
Mapoly0209s0007 Marchantia polymorpha HOM05D007176 ORTHO05D009050 1.0e-23 115.2 124 50.0
PRCOL_00005880 Prasinoderma coloniale HOM05D007176 ORTHO05D009050 4.0e-23 113.2 300 28.0
AUR62015309 Chenopodium quinoa HOM05D007176 ORTHO05D009050 7.5e-22 109.0 103 54.4
HanXRQChr10g0281201 Helianthus annuus HOM05D005998 ORTHO05D007664 5.7e-06 56.2 76 43.4
Atru.chr4.2693 Acer truncatum HOM05D002762 ORTHO05D004643 9.8e-06 55.5 84 40.5


User provided reference genes

Program Settings