Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p024496 Quercus lobata HOM05D006815 ORTHO05D008536 1.2e-152 543.1 269 100.0
CiPaw.09G028400 Carya illinoinensis HOM05D006815 ORTHO05D008536 9.2e-113 410.6 272 77.6
Haze_20020 Corylus avellana HOM05D006815 ORTHO05D008536 1.0e-111 407.1 272 77.9
Haze_20023 Corylus avellana HOM05D006815 ORTHO05D008536 1.0e-111 407.1 272 77.9
Cfa020143 Carpinus fangiana HOM05D006815 ORTHO05D008536 9.6e-110 400.6 272 77.2
Prupe.7G081100 Prunus persica HOM05D006815 ORTHO05D008536 2.9e-98 362.5 276 65.6
Dinv24040 Davidia involucrata HOM05D006815 ORTHO05D008536 1.5e-94 350.1 272 67.3
MD14G1054000 Malus domestica HOM05D006815 ORTHO05D008536 1.5e-91 340.1 276 61.6
Manes.08G042600 Manihot esculenta HOM05D006815 ORTHO05D008536 3.4e-91 339.0 272 65.4
Duzib106G1458 Durio zibethinus HOM05D006815 ORTHO05D008536 6.4e-90 334.7 278 63.3
TWI53G1298 Tripterygium wilfordii HOM05D006815 ORTHO05D008536 8.4e-90 334.3 274 63.5
Actinidia22067 Actinidia chinensis HOM05D006815 ORTHO05D008536 1.9e-89 333.2 274 63.1
RcHm_v2.0_Chr3g0479231 Rosa chinensis HOM05D006815 ORTHO05D008536 7.1e-89 331.3 279 64.2
Atru.chr8.1155 Acer truncatum HOM05D006815 ORTHO05D008536 1.8e-87 326.6 272 62.5
Thecc.05G174900 Theobroma cacao HOM05D006815 ORTHO05D008536 2.3e-87 326.2 277 62.8
Gohir.A01G137200 Gossypium hirsutum HOM05D006815 ORTHO05D008536 3.0e-87 325.9 272 62.9
Gohir.D01G124800 Gossypium hirsutum HOM05D006815 ORTHO05D008536 5.1e-87 325.1 272 62.5
Cpa.g.sc9.26 Carica papaya HOM05D006815 ORTHO05D008536 6.7e-87 324.7 276 62.0
Sabra06G0149300 Salix brachista HOM05D006815 ORTHO05D008536 6.7e-87 324.7 280 61.1
Gorai.002G155400 Gossypium raimondii HOM05D006815 ORTHO05D008536 1.1e-86 323.9 272 62.5
Potri.006G194600 Populus trichocarpa HOM05D006815 ORTHO05D008536 1.3e-85 320.5 280 60.7
CANSAT64G2825 Cannabis sativa HOM05D006815 ORTHO05D008536 3.7e-85 318.9 276 60.9
Ciclev10012299m.g Citrus clementina HOM05D006815 ORTHO05D008536 4.0e-84 315.5 276 62.7
FAN09G4209 Fragaria x ananassa HOM05D006815 ORTHO05D008536 5.3e-84 315.1 277 61.0
FAN02G2829 Fragaria x ananassa HOM05D006815 ORTHO05D008536 2.0e-83 313.2 280 60.0
FvH4_6g21880 Fragaria vesca HOM05D006815 ORTHO05D008536 4.5e-83 312.0 280 60.0
FAN14G3951 Fragaria x ananassa HOM05D006815 ORTHO05D008536 4.5e-83 312.0 280 60.0
PGR004G0977 Punica granatum HOM05D006815 ORTHO05D008536 4.9e-82 308.5 267 61.4
COL.COLO4_29358 Corchorus olitorius HOM05D006815 ORTHO05D008536 1.2e-80 303.9 273 60.8
TAR369G0232 Trochodendron aralioides HOM05D006815 ORTHO05D008536 2.3e-79 299.7 214 69.6
Eucgr.A02470 Eucalyptus grandis HOM05D006815 ORTHO05D008536 3.9e-79 298.9 277 58.8
Cc06_g15510 Coffea canephora HOM05D006815 ORTHO05D008536 8.7e-79 297.7 278 56.1
Migut.J01868 Erythranthe guttata HOM05D006815 ORTHO05D008536 8.7e-79 297.7 269 58.0
Oeu035701.1 Olea europaea HOM05D006815 ORTHO05D008536 1.1e-78 297.4 212 67.0
Lsat_1_v5_gn_1_60941 Lactuca sativa HOM05D006815 ORTHO05D008536 4.3e-78 295.4 267 57.7
Rhsim03G0035800 Rhododendron simsii HOM05D006815 ORTHO05D008536 5.7e-78 295.0 201 70.1
MSTRG.6498 Avicennia marina HOM05D006815 ORTHO05D008536 9.6e-78 294.3 272 56.2
vmacro22625 Vaccinium macrocarpon HOM05D006815 ORTHO05D008536 6.3e-77 291.6 280 57.5
PSO541G3114 Papaver somniferum HOM05D006815 ORTHO05D008536 2.4e-76 289.7 264 59.1
PSO675G7684 Papaver somniferum HOM05D006815 ORTHO05D008536 9.0e-76 287.7 264 58.7
ClCG10G017680 Citrullus lanatus HOM05D006815 ORTHO05D008536 3.4e-75 285.8 233 60.9
GSVIVG01033467001 Vitis vinifera HOM05D006815 ORTHO05D008536 4.5e-75 285.4 193 73.1
ECA248G0678 Erigeron canadensis HOM05D006815 ORTHO05D008536 7.6e-75 284.6 266 56.0
HanXRQChr01g0024541 Helianthus annuus HOM05D006815 ORTHO05D008536 7.6e-75 284.6 216 61.6
Peaxi162Scf00463g00417 Petunia axillaris HOM05D006815 ORTHO05D008536 1.7e-74 283.5 274 56.6
PGSC0003DMG400001108 Solanum tuberosum HOM05D006815 ORTHO05D008536 5.0e-74 282.0 234 61.1
DCAR_013671 Daucus carota HOM05D006815 ORTHO05D008536 6.5e-74 281.6 229 62.9
MELO3C009608.2 Cucumis melo HOM05D006815 ORTHO05D008536 1.4e-73 280.4 220 61.4
Nn2g15741 Nelumbo nucifera HOM05D006815 ORTHO05D008536 1.4e-73 280.4 265 55.5
Lalb_Chr15g0079111 Lupinus albus HOM05D006815 ORTHO05D008536 2.5e-73 279.6 272 54.8
Sopen03g011500 Solanum pennellii HOM05D006815 ORTHO05D008536 2.5e-73 279.6 268 56.0
CAN.G1314.3 Capsicum annuum HOM05D006815 ORTHO05D008536 3.2e-73 279.3 274 54.4
Sed0026757 Sechium edule HOM05D006815 ORTHO05D008536 7.2e-73 278.1 207 63.3
CsaV3_3G038620 Cucumis sativus L. HOM05D006815 ORTHO05D008536 1.2e-72 277.3 207 64.3
Solyc03g053020.4 Solanum lycopersicum HOM05D006815 ORTHO05D008536 2.7e-72 276.2 268 55.2
SGA_v2.0_scaffold57G20097 Striga asiatica HOM05D006815 ORTHO05D008536 3.6e-72 275.8 277 54.5
AUR62012005 Chenopodium quinoa HOM05D006815 ORTHO05D008536 1.0e-71 274.2 275 55.6
EL10Ac3g06884 Beta vulgaris HOM05D006815 ORTHO05D008536 2.3e-71 273.1 274 54.0
Aqoxy2G00089 Aquilegia oxysepala HOM05D006815 ORTHO05D008536 5.1e-71 271.9 264 54.2
AUR62015334 Chenopodium quinoa HOM05D006815 ORTHO05D008536 8.7e-71 271.2 209 65.1
Hund19213 Selenicereus undatus HOM05D006815 ORTHO05D008536 5.7e-70 268.5 271 53.5
CSS0043811 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 9.7e-70 267.7 209 66.0
arahy.Tifrunner.gnm1.ann1.8HEC25 Arachis hypogaea HOM05D006815 ORTHO05D008536 1.3e-69 267.3 259 54.1
Nitab4.5_0000009g0210 Nicotiana tabacum HOM05D006815 ORTHO05D008536 2.8e-69 266.2 274 53.3
SalBow6G3515 Salvia bowleyana HOM05D006815 ORTHO05D008536 2.8e-69 266.2 224 59.8
CSS0019995 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 4.8e-69 265.4 209 65.1
THA.LOC104824483 Tarenaya hassleriana HOM05D006815 ORTHO05D008536 6.3e-69 265.0 276 53.3
Thhalv10017089m.g Eutrema salsugineum HOM05D006815 ORTHO05D008536 1.4e-68 263.8 268 55.6
arahy.Tifrunner.gnm1.ann1.G1RGZB Arachis hypogaea HOM05D006815 ORTHO05D008536 2.4e-68 263.1 259 53.7
arahy.Tifrunner.gnm1.ann1.TZP9CN Arachis hypogaea HOM05D006815 ORTHO05D008536 3.1e-68 262.7 259 54.1
Lj2C363G3 Lonicera japonica HOM05D006815 ORTHO05D008536 6.9e-68 261.5 232 59.1
Sp4g24220 Schrenkiella parvula HOM05D006815 ORTHO05D008536 2.0e-67 260.0 238 58.0
Nitab4.5_0002339g0010 Nicotiana tabacum HOM05D006815 ORTHO05D008536 7.7e-67 258.1 274 53.6
TPR.G13363 Trifolium pratense HOM05D006815 ORTHO05D008536 1.0e-66 257.7 246 56.1
A05p02650 Brassica napus HOM05D006815 ORTHO05D008536 2.5e-65 253.1 266 51.5
BraA05t19258Z Brassica rapa HOM05D006815 ORTHO05D008536 2.5e-65 253.1 268 52.6
Glyma.19G149900 Glycine max HOM05D006815 ORTHO05D008536 4.2e-65 252.3 270 52.2
AT2G41950 Arabidopsis thaliana HOM05D006815 ORTHO05D008536 5.5e-65 251.9 267 54.3
Phvul.001G144400 Phaseolus vulgaris HOM05D006815 ORTHO05D008536 7.2e-65 251.5 269 53.9
Aa31LG1G24180 Aethionema arabicum HOM05D006815 ORTHO05D008536 9.4e-65 251.1 266 53.4
VMungo1383G0507 Vigna mungo HOM05D006815 ORTHO05D008536 9.4e-65 251.1 266 54.5
Medtr7g093640 Medicago truncatula HOM05D006815 ORTHO05D008536 1.2e-64 250.8 243 55.6
BcaC02g12449 Brassica carinata HOM05D006815 ORTHO05D008536 1.6e-64 250.4 243 53.9
C04p03160 Brassica napus HOM05D006815 ORTHO05D008536 1.6e-64 250.4 243 53.9
BolC4t21956H Brassica oleracea HOM05D006815 ORTHO05D008536 1.6e-64 250.4 243 53.9
AL4G40310 Arabidopsis lyrata HOM05D006815 ORTHO05D008536 3.6e-64 249.2 266 53.8
Psat3g067520 Pisum sativum HOM05D006815 ORTHO05D008536 4.6e-64 248.8 266 53.0
Carub.0004s2428 Capsella rubella HOM05D006815 ORTHO05D008536 5.1e-63 245.4 263 50.6
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 3.3e-62 242.7 227 52.9
Glyma.03G146600 Glycine max HOM05D006815 ORTHO05D008536 2.8e-61 239.6 269 51.3
ATR0598G218 Amborella trichopoda HOM05D006815 ORTHO05D008536 4.8e-61 238.8 268 47.0
Ca_08540_v3 Cicer arietinum L. HOM05D006815 ORTHO05D008536 4.8e-61 238.8 264 51.5
arahy.Tifrunner.gnm1.ann1.70NGGP Arachis hypogaea HOM05D006815 ORTHO05D008536 2.4e-60 236.5 260 50.4
Lj1g0024455 Lotus japonicus HOM05D006815 ORTHO05D008536 4.1e-60 235.7 270 50.4
MBI19_g17427_MAGBIO Magnolia biondii HOM05D006815 ORTHO05D008536 8.5e-58 228.0 272 47.8
CDE05G2500 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 3.3e-54 216.1 223 50.7
Sc13g0002390 Simmondsia chinensis HOM05D006815 ORTHO05D008536 1.3e-53 214.2 204 54.4
HPP92_023474 Vanilla planifolia HOM05D006815 ORTHO05D008536 1.3e-50 204.1 224 46.9
arahy.Tifrunner.gnm1.ann1.13XKQP Arachis hypogaea HOM05D006815 ORTHO05D008536 2.9e-50 203.0 234 50.0
HPP92_023458 Vanilla planifolia HOM05D006815 ORTHO05D008536 2.9e-50 203.0 224 46.9
MD12G1054600 Malus domestica HOM05D006815 ORTHO05D008536 2.3e-47 193.4 155 61.3
CARHR137070 Cardamine hirsuta HOM05D006815 ORTHO05D008536 4.8e-45 185.7 207 54.6
CAN.G274.29 Capsicum annuum HOM05D006815 ORTHO05D008536 7.0e-44 181.8 170 56.5
CDE11G0339 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 3.7e-37 159.5 161 52.2
SEGI_30907 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 1.7e-34 150.6 187 43.3
Os03g0226700 Oryza sativa ssp. japonica HOM05D006815 ORTHO05D008536 5.5e-33 145.6 200 38.5
BcaC03g14280 Brassica carinata HOM05D006815 ORTHO05D008536 1.4e-23 114.4 191 38.7
Mapoly0159s0012 Marchantia polymorpha HOM05D006815 ORTHO05D008536 7.5e-22 108.6 186 32.8
Pp3c12_7730 Physcomitrium patens HOM05D006815 ORTHO05D008536 5.9e-19 99.0 196 30.1
SEGI_06955 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 1.0e-18 98.2 124 41.1
arahy.Tifrunner.gnm1.ann1.19RU7Q Arachis hypogaea HOM05D006815 ORTHO05D008536 1.3e-18 97.8 75 60.0
Zm00001eb009870 Zea mays HOM05D006815 ORTHO05D008536 1.1e-17 94.7 172 33.1
Nn6g34990 Nelumbo nucifera HOM05D006815 ORTHO05D008536 1.4e-15 87.8 64 62.5
CARHR137080 Cardamine hirsuta HOM05D006815 ORTHO05D008536 5.2e-15 85.9 63 61.9
C02p16600 Brassica napus HOM05D006815 ORTHO05D008536 2.7e-11 73.6 71 54.9
BolC2t07761H Brassica oleracea HOM05D006815 ORTHO05D008536 7.8e-11 72.0 71 53.5


User provided reference genes

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