Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p024320 Quercus lobata HOM05D007056 ORTHO05D008278 3.1e-173 611.7 309 100.0
QL07p024358 Quercus lobata HOM05D007056 ORTHO05D008278 3.1e-173 611.7 309 100.0
CiPaw.09G028900 Carya illinoinensis HOM05D007056 ORTHO05D008278 1.2e-119 433.7 260 81.9
Cfa020149 Carpinus fangiana HOM05D007056 ORTHO05D008278 7.6e-119 431.0 264 82.2
Duzib093G0790 Durio zibethinus HOM05D007056 ORTHO05D008278 2.4e-109 399.4 274 76.3
Potri.016G060000 Populus trichocarpa HOM05D007056 ORTHO05D008278 3.9e-107 392.1 262 73.3
Cpa.g.sc85.61 Carica papaya HOM05D007056 ORTHO05D008278 6.7e-107 391.3 260 72.7
Dinv16370 Davidia involucrata HOM05D007056 ORTHO05D008278 5.6e-106 388.3 259 72.6
RcHm_v2.0_Chr3g0479281 Rosa chinensis HOM05D007056 ORTHO05D008278 1.3e-105 387.1 263 76.0
Ciclev10012466m.g Citrus clementina HOM05D007056 ORTHO05D008278 2.1e-105 386.3 268 74.6
FAN09G4108 Fragaria x ananassa HOM05D007056 ORTHO05D008278 2.1e-105 386.3 267 74.2
Thecc.05G174400 Theobroma cacao HOM05D007056 ORTHO05D008278 2.1e-105 386.3 272 71.0
Glyma.19G149400 Glycine max HOM05D007056 ORTHO05D008278 3.7e-105 385.6 264 72.0
VMungo1383G1827 Vigna mungo HOM05D007056 ORTHO05D008278 3.7e-105 385.6 289 68.5
Prupe.7G080200 Prunus persica HOM05D007056 ORTHO05D008278 4.8e-105 385.2 268 72.4
Actinidia38590 Actinidia chinensis HOM05D007056 ORTHO05D008278 6.2e-105 384.8 281 69.0
Gorai.012G099400 Gossypium raimondii HOM05D007056 ORTHO05D008278 6.2e-105 384.8 260 72.7
Gohir.D04G089300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 8.1e-105 384.4 260 72.7
MD14G1054600 Malus domestica HOM05D007056 ORTHO05D008278 8.1e-105 384.4 277 70.8
Sabra16G0062800 Salix brachista HOM05D007056 ORTHO05D008278 1.8e-104 383.3 260 70.8
CSS0008084 Camellia sinensis var. sinensis HOM05D007056 ORTHO05D008278 4.0e-104 382.1 269 71.7
Nn2g15729 Nelumbo nucifera HOM05D007056 ORTHO05D008278 4.0e-104 382.1 294 67.3
Lalb_Chr18g0048001 Lupinus albus HOM05D007056 ORTHO05D008278 2.0e-103 379.8 259 71.4
TAR369G0080 Trochodendron aralioides HOM05D007056 ORTHO05D008278 2.6e-103 379.4 267 73.8
Ca_08534_v3 Cicer arietinum L. HOM05D007056 ORTHO05D008278 4.5e-103 378.6 279 69.9
CANSAT64G0992 Cannabis sativa HOM05D007056 ORTHO05D008278 5.8e-103 378.3 263 72.6
TWI77G0776 Tripterygium wilfordii HOM05D007056 ORTHO05D008278 1.7e-102 376.7 260 73.1
FAN14G2508 Fragaria x ananassa HOM05D007056 ORTHO05D008278 2.2e-102 376.3 265 72.5
Lj1g0028043 Lotus japonicus HOM05D007056 ORTHO05D008278 2.9e-102 375.9 264 72.3
PGR142G3072 Punica granatum HOM05D007056 ORTHO05D008278 1.4e-101 373.6 286 69.6
Atru.chr8.1149 Acer truncatum HOM05D007056 ORTHO05D008278 1.9e-101 373.2 262 71.8
Lj2A365G87 Lonicera japonica HOM05D007056 ORTHO05D008278 9.3e-101 370.9 200 86.0
COL.COLO4_05956 Corchorus olitorius HOM05D007056 ORTHO05D008278 7.9e-100 367.9 270 70.0
arahy.Tifrunner.gnm1.ann1.DK1M71 Arachis hypogaea HOM05D007056 ORTHO05D008278 1.0e-99 367.5 276 68.5
AUR62011999 Chenopodium quinoa HOM05D007056 ORTHO05D008278 1.8e-99 366.7 276 68.1
CsaV3_3G038650 Cucumis sativus L. HOM05D007056 ORTHO05D008278 2.3e-99 366.3 264 69.3
EL10Ac3g06891 Beta vulgaris HOM05D007056 ORTHO05D008278 8.7e-99 364.4 275 67.3
Medtr7g093540 Medicago truncatula HOM05D007056 ORTHO05D008278 1.1e-98 364.0 281 67.3
Cc06_g15700 Coffea canephora HOM05D007056 ORTHO05D008278 1.9e-98 363.2 280 67.1
Aqoxy2G00097 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 2.5e-98 362.8 259 70.7
Phvul.001G143900 Phaseolus vulgaris HOM05D007056 ORTHO05D008278 3.3e-98 362.5 288 67.0
SGA_v2.0_scaffold69G23055 Striga asiatica HOM05D007056 ORTHO05D008278 4.3e-98 362.1 205 82.4
arahy.Tifrunner.gnm1.ann1.LTU6F0 Arachis hypogaea HOM05D007056 ORTHO05D008278 5.7e-98 361.7 276 67.4
Os02g0774500 Oryza sativa ssp. japonica HOM05D007056 ORTHO05D008278 1.3e-97 360.5 194 85.6
AUR62015338 Chenopodium quinoa HOM05D007056 ORTHO05D008278 1.6e-97 360.1 206 83.0
Ah.04g152820 Amaranthus hybridus HOM05D007056 ORTHO05D008278 2.1e-97 359.8 206 82.0
Solyc10g080560.2 Solanum lycopersicum HOM05D007056 ORTHO05D008278 1.8e-96 356.7 265 69.8
HanXRQChr01g0010031 Helianthus annuus HOM05D007056 ORTHO05D008278 2.4e-96 356.3 264 66.3
ATR0598G297 Amborella trichopoda HOM05D007056 ORTHO05D008278 3.1e-96 355.9 197 84.3
GSVIVG01033475001 Vitis vinifera HOM05D007056 ORTHO05D008278 4.1e-96 355.5 282 65.2
Sp3g10270 Schrenkiella parvula HOM05D007056 ORTHO05D008278 5.3e-96 355.1 198 82.8
MBI19_g17420_MAGBIO Magnolia biondii HOM05D007056 ORTHO05D008278 9.0e-96 354.4 255 68.2
BcaB06g25552 Brassica carinata HOM05D007056 ORTHO05D008278 1.2e-95 354.0 208 79.3
CAN.G128.50 Capsicum annuum HOM05D007056 ORTHO05D008278 1.2e-95 354.0 200 84.0
Eucgr.K01848 Eucalyptus grandis HOM05D007056 ORTHO05D008278 1.2e-95 354.0 281 63.7
Zm00001eb256530 Zea mays HOM05D007056 ORTHO05D008278 1.2e-95 354.0 194 84.0
Carub.0003s1138 Capsella rubella HOM05D007056 ORTHO05D008278 1.5e-95 353.6 257 68.9
PGSC0003DMG400023706 Solanum tuberosum HOM05D007056 ORTHO05D008278 1.5e-95 353.6 265 69.4
Sopen10g031100 Solanum pennellii HOM05D007056 ORTHO05D008278 2.0e-95 353.2 265 69.4
AT3G12040 Arabidopsis thaliana HOM05D007056 ORTHO05D008278 2.6e-95 352.8 199 81.4
CARHR086600 Cardamine hirsuta HOM05D007056 ORTHO05D008278 3.4e-95 352.4 240 71.2
A05p37300 Brassica napus HOM05D007056 ORTHO05D008278 7.6e-95 351.3 199 81.9
BcaC05g29295 Brassica carinata HOM05D007056 ORTHO05D008278 1.0e-94 350.9 211 77.7
Nitab4.5_0001079g0030 Nicotiana tabacum HOM05D007056 ORTHO05D008278 1.0e-94 350.9 200 81.5
BraA05t22526Z Brassica rapa HOM05D007056 ORTHO05D008278 2.9e-94 349.4 252 68.3
Thhalv10021378m.g Eutrema salsugineum HOM05D007056 ORTHO05D008278 8.4e-94 347.8 199 81.9
Lsat_1_v5_gn_5_165300 Lactuca sativa HOM05D007056 ORTHO05D008278 1.9e-93 346.7 280 64.6
C05p55770 Brassica napus HOM05D007056 ORTHO05D008278 2.5e-93 346.3 212 77.4
BolC5t34244H Brassica oleracea HOM05D007056 ORTHO05D008278 2.5e-93 346.3 212 77.4
AL3G23650 Arabidopsis lyrata HOM05D007056 ORTHO05D008278 5.5e-93 345.1 199 80.9
THA.LOC104809936 Tarenaya hassleriana HOM05D007056 ORTHO05D008278 7.2e-93 344.7 205 77.6
Aa31sc80G100 Aethionema arabicum HOM05D007056 ORTHO05D008278 6.1e-92 341.7 246 68.3
Peaxi162Scf00249g01221 Petunia axillaris HOM05D007056 ORTHO05D008278 7.9e-92 341.3 200 81.0
TPR.G35780 Trifolium pratense HOM05D007056 ORTHO05D008278 7.9e-92 341.3 253 70.8
HPP92_004381 Vanilla planifolia HOM05D007056 ORTHO05D008278 7.9e-92 341.3 195 83.1
Rhsim04G0094900 Rhododendron simsii HOM05D007056 ORTHO05D008278 2.3e-91 339.7 269 66.5
DCAR_019779 Daucus carota HOM05D007056 ORTHO05D008278 5.1e-91 338.6 226 73.0
CDE06G2434 Ceratophyllum demersum HOM05D007056 ORTHO05D008278 5.7e-90 335.1 257 65.8
SEGI_25756 Sequoiadendron giganteum HOM05D007056 ORTHO05D008278 9.7e-90 334.3 198 79.8
Hund24814 Selenicereus undatus HOM05D007056 ORTHO05D008278 6.9e-88 328.2 277 64.3
unitig_27.g25110 Utricularia gibba HOM05D007056 ORTHO05D008278 1.4e-85 320.5 189 77.2
AagrBONN_evm.TU.Sc2ySwM_344.2853 Anthoceros agrestis HOM05D007056 ORTHO05D008278 5.5e-85 318.5 194 75.3
SMO146G0068 Selaginella moellendorffii HOM05D007056 ORTHO05D008278 7.2e-85 318.2 206 72.3
Mapoly0003s0280 Marchantia polymorpha HOM05D007056 ORTHO05D008278 7.4e-82 308.1 196 71.4
Psat3g067120 Pisum sativum HOM05D007056 ORTHO05D008278 2.8e-81 306.2 167 82.6
Aqoxy3G01855 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 1.1e-80 304.3 245 63.3
PSO541G5037 Papaver somniferum HOM05D007056 ORTHO05D008278 1.8e-80 303.5 269 60.6
PSO675G9168 Papaver somniferum HOM05D007056 ORTHO05D008278 5.3e-80 302.0 269 60.2
Pp3c1_41490 Physcomitrium patens HOM05D007056 ORTHO05D008278 2.0e-79 300.1 201 70.6
BcaB06g25551 Brassica carinata HOM05D007056 ORTHO05D008278 2.2e-78 296.6 168 81.0
Oeu024494.3 Olea europaea HOM05D007056 ORTHO05D008278 3.8e-78 295.8 291 57.4
vmacro22110 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 6.5e-78 295.0 360 48.3
ECA248G2501 Erigeron canadensis HOM05D007056 ORTHO05D008278 4.2e-77 292.4 168 78.0
CBR_g48019 Chara braunii HOM05D000019 ORTHO05D000002 1.2e-76 290.8 186 72.6
ECA248G2516 Erigeron canadensis HOM05D007056 ORTHO05D008278 7.9e-76 288.1 163 77.9
FvH4_6g21980 Fragaria vesca HOM05D007056 ORTHO05D008278 5.7e-74 282.0 211 69.7
Sed0027134 Sechium edule HOM05D007056 ORTHO05D008278 9.1e-72 274.6 214 67.3
Haze_20013 Corylus avellana HOM05D007056 ORTHO05D008278 5.0e-62 242.3 489 36.8
Gohir.A04G057300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 1.5e-61 240.7 189 65.1
Psat3g067080 Pisum sativum HOM05D007056 ORTHO05D008278 2.2e-57 226.9 187 64.7
Migut.J01851 Erythranthe guttata HOM05D007056 ORTHO05D008278 8.3e-57 224.9 121 82.6
Psat3g067040 Pisum sativum HOM05D007056 ORTHO05D008278 7.7e-55 218.4 246 52.4
ECA248G3402 Erigeron canadensis HOM05D000009 ORTHO05D000008 1.9e-53 213.8 121 77.7
ClCG10G017660 Citrullus lanatus HOM05D007056 ORTHO05D008278 2.1e-52 210.3 212 56.1
Manes.08G042900 Manihot esculenta HOM05D007056 ORTHO05D008278 1.8e-51 207.2 170 66.5
MELO3C009610.2 Cucumis melo HOM05D007056 ORTHO05D008278 3.0e-51 206.5 264 47.3
FAN02G0430 Fragaria x ananassa HOM05D007056 ORTHO05D008278 4.5e-47 192.6 169 63.9
Sc13g0002370 Simmondsia chinensis HOM05D007056 ORTHO05D008278 2.3e-43 180.3 114 76.3
Nitab4.5_0001440g0050 Nicotiana tabacum HOM05D007056 ORTHO05D008278 6.4e-41 172.2 94 80.9
PRCOL_00003183 Prasinoderma coloniale HOM05D007056 ORTHO05D008278 8.3e-33 145.2 215 43.7
Hma1.2p1_0645F.1_g194860 Hydrangea macrophylla HOM05D007056 ORTHO05D008278 1.1e-32 144.8 73 86.3
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 5.2e-27 125.9 68 80.9
ECA233G2032 Erigeron canadensis HOM05D007056 ORTHO05D008278 6.8e-27 125.6 73 75.3
vmacro22990 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 6.6e-14 82.4 96 50.0
SHI31775 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-06 58.2 38 73.7


User provided reference genes

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