Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p024293 Quercus lobata HOM05D003641 ORTHO05D004915 5.0e-186 654.4 365 100.0
CiPaw.09G029000 Carya illinoinensis HOM05D003641 ORTHO05D004915 3.3e-161 572.0 365 78.9
Haze_20012 Corylus avellana HOM05D003641 ORTHO05D004915 3.4e-158 562.0 365 75.3
Cfa020150 Carpinus fangiana HOM05D003641 ORTHO05D004915 4.4e-158 561.6 365 75.3
Duzib093G1627 Durio zibethinus HOM05D003641 ORTHO05D004915 5.4e-156 554.7 365 75.3
TWI74G1529 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 3.5e-155 552.0 365 73.2
COL.COLO4_29349 Corchorus olitorius HOM05D003641 ORTHO05D004915 4.5e-155 551.6 365 80.8
Eucgr.A02465 Eucalyptus grandis HOM05D003641 ORTHO05D004915 1.0e-154 550.4 365 81.1
TWI53G2154 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 2.3e-154 549.3 365 72.9
Gorai.012G099600 Gossypium raimondii HOM05D003641 ORTHO05D004915 6.6e-154 547.7 365 72.9
Potri.006G194400 Populus trichocarpa HOM05D003641 ORTHO05D004915 1.1e-153 547.0 365 73.4
CANSAT64G0207 Cannabis sativa HOM05D003641 ORTHO05D004915 1.9e-153 546.2 365 76.4
Gohir.D04G089500 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.9e-153 546.2 365 72.6
Manes.08G042800 Manihot esculenta HOM05D003641 ORTHO05D004915 1.9e-153 546.2 365 72.6
Manes.09G037400 Manihot esculenta HOM05D003641 ORTHO05D004915 2.5e-153 545.8 365 72.3
Thecc.05G174300 Theobroma cacao HOM05D003641 ORTHO05D004915 2.5e-153 545.8 365 75.6
Sabra06G0149100 Salix brachista HOM05D003641 ORTHO05D004915 5.6e-153 544.7 365 72.3
Atru.chr8.1148 Acer truncatum HOM05D003641 ORTHO05D004915 7.3e-153 544.3 365 73.7
Gohir.A04G051900 Gossypium hirsutum HOM05D003641 ORTHO05D004915 7.3e-153 544.3 365 73.4
PGR004G2452 Punica granatum HOM05D003641 ORTHO05D004915 7.3e-153 544.3 365 78.6
Aa31sc80G90 Aethionema arabicum HOM05D003641 ORTHO05D004915 9.5e-153 543.9 365 70.7
Lj2A365T90 Lonicera japonica HOM05D003641 ORTHO05D004915 2.1e-152 542.7 365 74.8
THA.LOC104826776 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 3.6e-152 542.0 365 78.4
Duzib128G0491 Durio zibethinus HOM05D003641 ORTHO05D004915 6.1e-152 541.2 365 72.1
Hma1.2p1_0676F.1_g201930 Hydrangea macrophylla HOM05D003641 ORTHO05D004915 1.4e-151 540.0 365 79.5
MD14G1054700 Malus domestica HOM05D003641 ORTHO05D004915 1.4e-151 540.0 365 71.5
MELO3C009611.2 Cucumis melo HOM05D003641 ORTHO05D004915 2.3e-151 539.3 365 75.1
DCAR_017036 Daucus carota HOM05D003641 ORTHO05D004915 3.1e-151 538.9 365 72.6
MD12G1055300 Malus domestica HOM05D003641 ORTHO05D004915 3.1e-151 538.9 365 77.3
Cpa.g.sc85.60 Carica papaya HOM05D003641 ORTHO05D004915 5.2e-151 538.1 365 76.2
RcHm_v2.0_Chr3g0479291 Rosa chinensis HOM05D003641 ORTHO05D004915 5.2e-151 538.1 365 77.8
FAN02G1826 Fragaria x ananassa HOM05D003641 ORTHO05D004915 6.8e-151 537.7 365 73.7
CsaV3_3G038670 Cucumis sativus L. HOM05D003641 ORTHO05D004915 8.9e-151 537.3 365 72.9
FvH4_6g21990 Fragaria vesca HOM05D003641 ORTHO05D004915 8.9e-151 537.3 365 70.7
FAN14G0097 Fragaria x ananassa HOM05D003641 ORTHO05D004915 8.9e-151 537.3 365 70.7
Prupe.7G080100 Prunus persica HOM05D003641 ORTHO05D004915 8.9e-151 537.3 365 77.8
THA.LOC104809934 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 8.9e-151 537.3 366 77.0
Ciclev10012043m.g Citrus clementina HOM05D003641 ORTHO05D004915 1.2e-150 537.0 365 72.9
vmacro07894 Vaccinium macrocarpon HOM05D003641 ORTHO05D004915 1.2e-150 537.0 365 77.5
FAN05G2657 Fragaria x ananassa HOM05D003641 ORTHO05D004915 3.4e-150 535.4 365 75.6
Potri.016G060100 Populus trichocarpa HOM05D003641 ORTHO05D004915 3.4e-150 535.4 365 73.7
HanXRQChr01g0010591 Helianthus annuus HOM05D003641 ORTHO05D004915 4.4e-150 535.0 365 74.5
BcaB06g25550 Brassica carinata HOM05D003641 ORTHO05D004915 5.8e-150 534.6 365 70.7
C05p55760 Brassica napus HOM05D003641 ORTHO05D004915 7.5e-150 534.3 365 70.1
FAN09G3507 Fragaria x ananassa HOM05D003641 ORTHO05D004915 7.5e-150 534.3 365 75.3
Sabra16G0062900 Salix brachista HOM05D003641 ORTHO05D004915 7.5e-150 534.3 365 71.0
CSS0018208 Camellia sinensis var. sinensis HOM05D003641 ORTHO05D004915 9.8e-150 533.9 365 77.8
CiPaw.10G025600 Carya illinoinensis HOM05D003641 ORTHO05D004915 9.8e-150 533.9 365 70.4
AL3G23660 Arabidopsis lyrata HOM05D003641 ORTHO05D004915 1.3e-149 533.5 365 69.3
CARHR086620 Cardamine hirsuta HOM05D003641 ORTHO05D004915 1.3e-149 533.5 365 69.6
Thhalv10021006m.g Eutrema salsugineum HOM05D003641 ORTHO05D004915 2.2e-149 532.7 365 75.6
Sp3g10280 Schrenkiella parvula HOM05D003641 ORTHO05D004915 2.2e-149 532.7 365 71.2
ClCG10G017650 Citrullus lanatus HOM05D003641 ORTHO05D004915 4.9e-149 531.6 365 70.7
AT3G12050 Arabidopsis thaliana HOM05D003641 ORTHO05D004915 6.4e-149 531.2 365 68.8
TAR633G0428 Trochodendron aralioides HOM05D003641 ORTHO05D004915 8.3e-149 530.8 365 71.5
arahy.Tifrunner.gnm1.ann1.G8NWJQ Arachis hypogaea HOM05D003641 ORTHO05D004915 1.1e-148 530.4 365 80.3
Dinv24057 Davidia involucrata HOM05D003641 ORTHO05D004915 1.1e-148 530.4 365 80.3
arahy.Tifrunner.gnm1.ann1.86C462 Arachis hypogaea HOM05D003641 ORTHO05D004915 2.4e-148 529.3 365 80.3
Lsat_1_v5_gn_5_164500 Lactuca sativa HOM05D003641 ORTHO05D004915 4.1e-148 528.5 362 76.8
Oeu063867.1 Olea europaea HOM05D003641 ORTHO05D004915 4.1e-148 528.5 365 69.6
BraA05t22525Z Brassica rapa HOM05D003641 ORTHO05D004915 5.4e-148 528.1 365 69.6
Hund24813 Selenicereus undatus HOM05D003641 ORTHO05D004915 5.4e-148 528.1 365 69.9
A05p37290 Brassica napus HOM05D003641 ORTHO05D004915 1.6e-147 526.6 365 69.6
Carub.0003s1139 Capsella rubella HOM05D003641 ORTHO05D004915 2.7e-147 525.8 365 75.6
Aqoxy1G00140 Aquilegia oxysepala HOM05D003641 ORTHO05D004915 4.6e-147 525.0 367 74.4
Rhsim03G0004900 Rhododendron simsii HOM05D003641 ORTHO05D004915 1.0e-146 523.9 365 73.7
Sed0007356 Sechium edule HOM05D003641 ORTHO05D004915 1.7e-146 523.1 366 73.5
Cc06_g15710 Coffea canephora HOM05D003641 ORTHO05D004915 3.0e-146 522.3 365 77.8
Lju124A24T32 Lonicera japonica HOM05D003641 ORTHO05D004915 6.6e-146 521.2 365 72.6
Nitab4.5_0007274g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 8.6e-146 520.8 365 68.5
Peaxi162Scf00258g00921 Petunia axillaris HOM05D003641 ORTHO05D004915 1.5e-145 520.0 365 69.0
Sc13g0002360 Simmondsia chinensis HOM05D003641 ORTHO05D004915 3.3e-145 518.8 365 68.8
TAR636G0728 Trochodendron aralioides HOM05D003641 ORTHO05D004915 3.3e-145 518.8 365 68.2
Glyma.19G149300 Glycine max HOM05D003641 ORTHO05D004915 5.6e-145 518.1 365 77.0
PGSC0003DMG400011447 Solanum tuberosum HOM05D003641 ORTHO05D004915 5.6e-145 518.1 365 67.9
CAN.G960.10 Capsicum annuum HOM05D003641 ORTHO05D004915 7.3e-145 517.7 366 68.6
ECA248G0025 Erigeron canadensis HOM05D003641 ORTHO05D004915 1.2e-144 516.9 366 69.4
Migut.J01850 Erythranthe guttata HOM05D003641 ORTHO05D004915 1.6e-144 516.5 366 76.2
Phvul.001G143800 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 1.6e-144 516.5 365 78.4
SalBow6G5303 Salvia bowleyana HOM05D003641 ORTHO05D004915 2.1e-144 516.2 365 70.1
Ca_08533_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.6e-144 515.4 365 69.0
Lalb_Chr18g0047991 Lupinus albus HOM05D003641 ORTHO05D004915 4.7e-144 515.0 366 78.4
Glyma.03G146100 Glycine max HOM05D003641 ORTHO05D004915 6.2e-144 514.6 365 74.5
Sopen10g029550 Solanum pennellii HOM05D003641 ORTHO05D004915 6.2e-144 514.6 365 66.6
BolC5t34243H Brassica oleracea HOM05D003641 ORTHO05D004915 1.4e-143 513.5 408 62.7
Solyc10g078930.2 Solanum lycopersicum HOM05D003641 ORTHO05D004915 1.8e-143 513.1 365 66.8
SGA_v2.0_scaffold69G23056 Striga asiatica HOM05D003641 ORTHO05D004915 2.3e-143 512.7 367 75.5
VMungo1383G0826 Vigna mungo HOM05D003641 ORTHO05D004915 2.3e-143 512.7 365 77.8
Psat3g067000 Pisum sativum HOM05D003641 ORTHO05D004915 4.0e-143 511.9 365 67.1
SGA_v2.0_scaffold105G30499 Striga asiatica HOM05D003641 ORTHO05D004915 8.9e-143 510.8 368 68.2
Medtr7g093500 Medicago truncatula HOM05D003641 ORTHO05D004915 1.2e-142 510.4 365 71.5
MBI19_g17419_MAGBIO Magnolia biondii HOM05D003641 ORTHO05D004915 1.5e-142 510.0 365 67.1
MSTRG.19915 Avicennia marina HOM05D003641 ORTHO05D004915 4.4e-142 508.4 366 72.7
Ca_12045_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 9.8e-142 507.3 365 68.5
TPR.G30301 Trifolium pratense HOM05D003641 ORTHO05D004915 9.8e-142 507.3 365 74.2
EL10Ac3g06892 Beta vulgaris HOM05D003641 ORTHO05D004915 2.2e-141 506.1 365 68.5
Lj5g0013930 Lotus japonicus HOM05D003641 ORTHO05D004915 4.9e-141 505.0 368 72.6
AUR62011998 Chenopodium quinoa HOM05D003641 ORTHO05D004915 6.4e-141 504.6 365 65.8
Oeu006209.1 Olea europaea HOM05D003641 ORTHO05D004915 8.3e-141 504.2 366 71.0
ATR0598G178 Amborella trichopoda HOM05D003641 ORTHO05D004915 3.2e-140 502.3 365 67.9
AUR62015343 Chenopodium quinoa HOM05D003641 ORTHO05D004915 3.2e-140 502.3 365 66.3
CDE05G2508 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 4.1e-140 501.9 370 65.1
Lj1g0002782 Lotus japonicus HOM05D003641 ORTHO05D004915 1.6e-139 500.0 365 65.8
CDE11G0833 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 3.5e-139 498.8 365 64.9
Nitab4.5_0001137g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 8.1e-136 487.6 365 65.8
Medtr0136s0060 Medicago truncatula HOM05D003641 ORTHO05D004915 1.5e-134 483.4 366 64.5
Glyma.09G109200 Glycine max HOM05D003641 ORTHO05D004915 3.4e-134 482.3 365 63.6
PSO135G0566 Papaver somniferum HOM05D003641 ORTHO05D004915 4.4e-134 481.9 368 64.7
PSO724G0609 Papaver somniferum HOM05D003641 ORTHO05D004915 4.4e-134 481.9 368 64.9
BcaC05g29294 Brassica carinata HOM05D003641 ORTHO05D004915 5.8e-134 481.5 365 65.2
Hund19209 Selenicereus undatus HOM05D003641 ORTHO05D004915 1.3e-133 480.3 366 63.7
unitig_899.g15167 Utricularia gibba HOM05D003641 ORTHO05D004915 2.9e-133 479.2 366 66.9
Glyma.02G171100 Glycine max HOM05D003641 ORTHO05D004915 4.1e-132 475.3 365 68.8
Phvul.007G261100 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 2.1e-131 473.0 365 66.6
Ah.04g152830 Amaranthus hybridus HOM05D003641 ORTHO05D004915 4.6e-131 471.9 347 65.1
VMungo0720G0815 Vigna mungo HOM05D003641 ORTHO05D004915 1.7e-130 469.9 365 66.6
Nitab4.5_0000105g0210 Nicotiana tabacum HOM05D003641 ORTHO05D004915 5.1e-130 468.4 359 64.9
Nitab4.5_0002343g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 4.3e-129 465.3 365 63.6
HPP92_005766 Vanilla planifolia HOM05D003641 ORTHO05D004915 7.3e-129 464.5 372 61.0
Zm00001eb037640 Zea mays HOM05D003641 ORTHO05D004915 5.2e-127 458.4 366 61.5
Os08g0464000 Oryza sativa ssp. japonica HOM05D003641 ORTHO05D004915 8.9e-127 457.6 366 66.7
HPP92_009321 Vanilla planifolia HOM05D003641 ORTHO05D004915 3.8e-125 452.2 371 60.6
unitig_746.g26803 Utricularia gibba HOM05D003641 ORTHO05D004915 7.1e-124 448.0 351 63.0
SMO203G0054 Selaginella moellendorffii HOM05D003641 ORTHO05D004915 4.6e-123 445.3 365 58.9
Zm00001eb177410 Zea mays HOM05D003641 ORTHO05D004915 4.6e-123 445.3 369 59.1
Pp3c15_21400 Physcomitrium patens HOM05D003641 ORTHO05D004915 2.3e-122 443.0 368 59.0
Mapoly0109s0023 Marchantia polymorpha HOM05D003641 ORTHO05D004915 5.1e-122 441.8 365 59.5
Pp3c9_15400 Physcomitrium patens HOM05D003641 ORTHO05D004915 6.6e-122 441.4 365 58.4
AagrBONN_evm.TU.Sc2ySwM_344.3694 Anthoceros agrestis HOM05D003641 ORTHO05D004915 2.4e-119 433.0 365 57.5
Nn7g35972 Nelumbo nucifera HOM05D003641 ORTHO05D004915 2.1e-115 419.9 317 71.6
Nn7g35971 Nelumbo nucifera HOM05D003641 ORTHO05D004915 1.5e-110 403.7 302 66.2
Psat6g123080 Pisum sativum HOM05D003641 ORTHO05D004915 5.8e-110 401.7 309 68.9
Actinidia22049 Actinidia chinensis HOM05D003641 ORTHO05D004915 1.2e-107 394.0 367 60.5
Gorai.012G099500 Gossypium raimondii HOM05D003641 ORTHO05D004915 1.8e-103 380.2 337 61.1
GSVIVG01033476001 Vitis vinifera HOM05D003641 ORTHO05D004915 1.8e-103 380.2 365 55.1
TPR.G35793 Trifolium pratense HOM05D003641 ORTHO05D004915 1.7e-101 373.6 309 62.1
Actinidia14376 Actinidia chinensis HOM05D003641 ORTHO05D004915 7.9e-99 364.8 288 68.4
Gohir.D04G089400 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.4e-74 284.3 222 68.9
PRCOL_00005901 Prasinoderma coloniale HOM05D003641 ORTHO05D004915 3.5e-70 269.6 369 41.5
BcaC09g48210 Brassica carinata HOM05D003641 ORTHO05D004915 2.9e-69 266.5 258 55.8
Gohir.A04G052026 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.9e-68 263.8 156 80.1
SEGI_39925 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 5.5e-68 262.3 283 53.4
MCO07G236 Micromonas commoda HOM05D003641 ORTHO05D004915 6.5e-61 238.8 367 37.9
Gohir.A04G052000 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.4e-58 231.1 185 67.6
Cre03.g199300 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D004915 3.4e-57 226.5 365 43.3
Actinidia32404 Actinidia chinensis HOM05D003641 ORTHO05D004915 1.3e-56 224.6 114 92.1
arahy.Tifrunner.gnm1.ann1.VQQW03 Arachis hypogaea HOM05D003641 ORTHO05D004915 3.1e-55 219.9 125 82.4
arahy.Tifrunner.gnm1.ann1.EPN7T6 Arachis hypogaea HOM05D003641 ORTHO05D004915 5.9e-54 215.7 123 78.9
Ca_31327_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.5e-33 147.9 85 74.1
Ca_14569_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.4e-33 146.7 85 74.1
Glyma.09G095600 Glycine max HOM05D003641 ORTHO05D004915 4.4e-33 146.4 146 67.1
Ca_20435_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 7.5e-33 145.6 85 72.9
Ca_09720_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 4.1e-31 139.8 85 70.6
arahy.Tifrunner.gnm1.ann1.20Y790 Arachis hypogaea HOM05D003641 ORTHO05D004915 4.6e-30 136.3 106 65.1
SEGI_05882 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 4.6e-30 136.3 211 38.9
HanXRQChr03g0083061 Helianthus annuus HOM05D003641 ORTHO05D004915 7.8e-30 135.6 139 49.6
Hund07686 Selenicereus undatus HOM05D003641 ORTHO05D011049 5.8e-25 119.4 200 37.0
Dinv18651 Davidia involucrata HOM05D003641 ORTHO05D004915 2.1e-22 110.9 62 82.3
Dinv18648 Davidia involucrata HOM05D003641 ORTHO05D004915 3.5e-22 110.2 58 86.2
Dinv26263 Davidia involucrata HOM05D003641 ORTHO05D004915 3.5e-22 110.2 58 86.2
Hund07687 Selenicereus undatus HOM05D003641 ORTHO05D021213 5.1e-21 106.3 205 35.6
Ca_12039_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 4.3e-20 103.2 57 80.7
arahy.Tifrunner.gnm1.ann1.XYD4PT Arachis hypogaea HOM05D003641 ORTHO05D038899 7.3e-20 102.4 76 67.1
MCO11G399 Micromonas commoda HOM05D003641 ORTHO05D044219 9.5e-20 102.1 133 39.1
Nn8g39306 Nelumbo nucifera HOM05D003641 ORTHO05D004915 4.7e-19 99.8 56 82.1
EL10Ac8g19334 Beta vulgaris HOM05D003641 ORTHO05D027013 1.8e-18 97.8 75 58.7
Ca_03268_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 8.9e-18 95.5 59 72.9
CBR_g18730 Chara braunii HOM05D003641 ORTHO05D004915 4.4e-17 93.2 55 80.0
BolC1t05367H Brassica oleracea HOM05D003641 ORTHO05D038899 7.1e-15 85.9 58 65.5
Ca_20824_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.5e-14 83.6 40 82.5
SGA_v2.0_scaffold200G41266 Striga asiatica HOM05D037212 ORTHO05D027013 1.7e-13 81.3 75 54.7
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.9e-13 80.1 79 53.2
Cre08.g358539 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D044219 1.9e-12 77.8 149 28.2
VMungo0464G0530 Vigna mungo HOM05D003641 ORTHO05D004915 3.1e-10 70.5 64 51.6
Peaxi162Scf00003g04539 Petunia axillaris HOM05D000312 ORTHO05D000221 6.8e-10 69.3 87 44.8
PGSC0003DMG400035352 Solanum tuberosum HOM05D003641 ORTHO05D004915 1.5e-09 68.2 81 45.7
CsaV3_5G015400 Cucumis sativus L. HOM05D003641 ORTHO05D004915 2.6e-09 67.4 50 60.0
MCO13G471 Micromonas commoda HOM05D003641 ORTHO05D049026 2.4e-07 60.8 175 29.7


User provided reference genes

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