Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p023738 Quercus lobata HOM05D007306 ORTHO05D009112 1.0e-70 270.0 141 100.0
CiPaw.09G030300 Carya illinoinensis HOM05D007306 ORTHO05D009112 8.4e-49 197.2 142 76.1
Cfa020165 Carpinus fangiana HOM05D007306 ORTHO05D009112 2.1e-47 192.6 145 74.5
CiPaw.10G026400 Carya illinoinensis HOM05D007306 ORTHO05D009112 7.9e-47 190.7 142 73.2
Dinv14300 Davidia involucrata HOM05D007306 ORTHO05D009112 4.0e-43 178.3 136 68.4
Thecc.05G171400 Theobroma cacao HOM05D007306 ORTHO05D009112 2.2e-41 172.6 146 67.1
TAR623G0307 Trochodendron aralioides HOM05D007306 ORTHO05D009112 1.4e-40 169.9 138 68.8
COL.COLO4_33982 Corchorus olitorius HOM05D007306 ORTHO05D009112 1.6e-39 166.4 149 63.8
Peaxi162Scf00258g00720 Petunia axillaris HOM05D007306 ORTHO05D009112 1.0e-38 163.7 139 64.0
Potri.006G192500 Populus trichocarpa HOM05D007306 ORTHO05D009112 3.9e-38 161.8 146 64.4
Duzib093G0428 Durio zibethinus HOM05D007306 ORTHO05D009112 8.7e-38 160.6 144 62.5
Prupe.7G077000 Prunus persica HOM05D007306 ORTHO05D009112 8.7e-38 160.6 140 66.4
Hma1.2p1_0386F.1_g141880 Hydrangea macrophylla HOM05D007306 ORTHO05D009112 1.5e-37 159.8 139 65.5
Nitab4.5_0001137g0060 Nicotiana tabacum HOM05D007306 ORTHO05D009112 1.5e-37 159.8 140 63.6
Nn2g15686 Nelumbo nucifera HOM05D007306 ORTHO05D009112 5.7e-37 157.9 139 66.2
PGR004G2053 Punica granatum HOM05D007306 ORTHO05D009112 1.6e-36 156.4 150 63.3
Atru.chr8.1112 Acer truncatum HOM05D007306 ORTHO05D009112 2.8e-36 155.6 146 63.7
Nitab4.5_0007619g0010 Nicotiana tabacum HOM05D007306 ORTHO05D009112 3.7e-36 155.2 140 62.1
Cpa.g.sc85.66 Carica papaya HOM05D007306 ORTHO05D009112 1.1e-35 153.7 131 65.6
Gohir.A01G191300 Gossypium hirsutum HOM05D007306 ORTHO05D009112 2.4e-35 152.5 144 62.5
Gorai.002G224300 Gossypium raimondii HOM05D007306 ORTHO05D009112 2.4e-35 152.5 144 62.5
Potri.016G045700 Populus trichocarpa HOM05D007306 ORTHO05D009112 4.1e-35 151.8 149 61.1
Gohir.D01G178600 Gossypium hirsutum HOM05D007306 ORTHO05D009112 1.5e-34 149.8 144 61.8
MD12G1057100 Malus domestica HOM05D007306 ORTHO05D009112 1.5e-34 149.8 141 62.4
CANSAT64G1677 Cannabis sativa HOM05D007306 ORTHO05D009112 5.9e-34 147.9 147 60.5
Ciclev10013031m.g Citrus clementina HOM05D007306 ORTHO05D009112 1.0e-33 147.1 154 62.3
MD14G1057700 Malus domestica HOM05D007306 ORTHO05D009112 1.3e-33 146.7 143 65.0
TWI74G1393 Tripterygium wilfordii HOM05D007306 ORTHO05D009112 1.4e-32 143.3 138 62.3
Aqoxy1G00127 Aquilegia oxysepala HOM05D007306 ORTHO05D009112 1.9e-32 142.9 143 57.3
Manes.08G044500 Manihot esculenta HOM05D007306 ORTHO05D009112 2.1e-31 139.4 147 57.8
arahy.Tifrunner.gnm1.ann1.I9AM74 Arachis hypogaea HOM05D007306 ORTHO05D009112 6.1e-31 137.9 145 57.9
Lj1g0014955 Lotus japonicus HOM05D007306 ORTHO05D009112 7.9e-31 137.5 136 61.8
vmacro07907 Vaccinium macrocarpon HOM05D007306 ORTHO05D009112 7.9e-31 137.5 139 59.7
Lalb_Chr18g0047871 Lupinus albus HOM05D007306 ORTHO05D009112 2.3e-30 136.0 142 59.2
arahy.Tifrunner.gnm1.ann1.T0JWFY Arachis hypogaea HOM05D007306 ORTHO05D009112 3.0e-30 135.6 145 57.9
Migut.J01836 Erythranthe guttata HOM05D007306 ORTHO05D009112 3.9e-30 135.2 142 51.4
SalBow6G0438 Salvia bowleyana HOM05D007306 ORTHO05D009112 8.7e-30 134.0 133 57.1
SalBow6G2293 Salvia bowleyana HOM05D007306 ORTHO05D009112 8.7e-30 134.0 133 57.1
RcHm_v2.0_Chr3g0479681 Rosa chinensis HOM05D007306 ORTHO05D009112 1.9e-29 132.9 140 57.9
Actinidia32393 Actinidia chinensis HOM05D007306 ORTHO05D009112 2.5e-29 132.5 140 55.0
FAN14G0362 Fragaria x ananassa HOM05D007306 ORTHO05D009112 2.5e-29 132.5 149 57.0
FvH4_6g22320 Fragaria vesca HOM05D007306 ORTHO05D009112 3.3e-29 132.1 147 57.8
FAN05G3567 Fragaria x ananassa HOM05D007306 ORTHO05D009112 3.3e-29 132.1 147 57.8
FAN09G2453 Fragaria x ananassa HOM05D007306 ORTHO05D009112 6.3e-28 127.9 145 57.2
Oeu063786.1 Olea europaea HOM05D007306 ORTHO05D009112 6.3e-28 127.9 126 55.6
TPR.G22157 Trifolium pratense HOM05D007306 ORTHO05D009112 1.1e-27 127.1 147 57.8
CAN.G1143.4 Capsicum annuum HOM05D007306 ORTHO05D009112 1.4e-27 126.7 133 60.2
FAN02G3291 Fragaria x ananassa HOM05D007306 ORTHO05D009112 1.4e-27 126.7 147 55.8
Psat3g068560 Pisum sativum HOM05D007306 ORTHO05D009112 2.4e-27 125.9 139 56.1
Cc06_g15870 Coffea canephora HOM05D007306 ORTHO05D009112 1.5e-26 123.2 152 51.3
Rhsim03G0005900 Rhododendron simsii HOM05D007306 ORTHO05D009112 3.4e-26 122.1 140 55.7
Actinidia22036 Actinidia chinensis HOM05D007306 ORTHO05D009112 4.5e-26 121.7 138 52.9
Solyc03g120950.3 Solanum lycopersicum HOM05D007306 ORTHO05D009112 5.9e-26 121.3 132 55.3
Sopen03g039780 Solanum pennellii HOM05D007306 ORTHO05D009112 5.9e-26 121.3 132 55.3
PSO384G4645 Papaver somniferum HOM05D007306 ORTHO05D009112 1.0e-25 120.6 138 54.3
PSO339G5155 Papaver somniferum HOM05D007306 ORTHO05D009112 2.2e-25 119.4 138 54.3
Sed0004413 Sechium edule HOM05D007306 ORTHO05D009112 2.2e-25 119.4 144 51.4
Duzib106G0602 Durio zibethinus HOM05D007306 ORTHO05D009112 2.9e-25 119.0 148 50.0
Glyma.03G144700 Glycine max HOM05D007306 ORTHO05D009112 2.9e-25 119.0 142 55.6
Medtr7g093220 Medicago truncatula HOM05D007306 ORTHO05D009112 5.0e-25 118.2 138 55.1
MSTRG.19909 Avicennia marina HOM05D007306 ORTHO05D009112 6.5e-25 117.9 141 47.5
Sabra16G0049700 Salix brachista HOM05D007306 ORTHO05D009112 6.5e-25 117.9 100 64.0
A05p02730 Brassica napus HOM05D007306 ORTHO05D009112 2.5e-24 115.9 135 52.6
BraA05t19265Z Brassica rapa HOM05D007306 ORTHO05D009112 2.5e-24 115.9 135 52.6
Manes.09G035400 Manihot esculenta HOM05D007306 ORTHO05D009112 2.5e-24 115.9 137 53.3
CsaV3_3G038820 Cucumis sativus L. HOM05D007306 ORTHO05D009112 3.2e-24 115.5 144 49.3
SGA_v2.0_scaffold69G23062 Striga asiatica HOM05D007306 ORTHO05D009112 4.2e-24 115.2 135 50.4
PGSC0003DMG400002614 Solanum tuberosum HOM05D007306 ORTHO05D009112 5.5e-24 114.8 131 54.2
C04p03260 Brassica napus HOM05D007306 ORTHO05D009112 1.2e-23 113.6 141 52.5
VMungo1383G3094 Vigna mungo HOM05D007306 ORTHO05D009112 1.2e-23 113.6 136 55.9
Hund24792 Selenicereus undatus HOM05D007306 ORTHO05D009112 1.6e-23 113.2 153 51.0
AL4G40480 Arabidopsis lyrata HOM05D007306 ORTHO05D009112 2.7e-23 112.5 143 51.7
Phvul.001G142300 Phaseolus vulgaris HOM05D007306 ORTHO05D009112 3.6e-23 112.1 138 53.6
BcaC02g12458 Brassica carinata HOM05D007306 ORTHO05D009112 4.6e-23 111.7 141 51.8
BcaC02g12459 Brassica carinata HOM05D007306 ORTHO05D009112 4.6e-23 111.7 141 51.8
BolC4t21964H Brassica oleracea HOM05D007306 ORTHO05D009112 4.6e-23 111.7 141 51.8
DCAR_017009 Daucus carota HOM05D004472 ORTHO05D007169 6.1e-23 111.3 131 50.4
Thhalv10017403m.g Eutrema salsugineum HOM05D007306 ORTHO05D009112 1.0e-22 110.5 142 52.1
MBI06_g29488_MAGBIO Magnolia biondii HOM05D007306 ORTHO05D009112 1.0e-22 110.5 127 50.4
BcaNung04408 Brassica carinata HOM05D007306 ORTHO05D009112 1.4e-22 110.2 140 50.7
GSVIVG01033497001 Vitis vinifera HOM05D007306 ORTHO05D009112 1.4e-22 110.2 137 48.9
MELO3C009626.2 Cucumis melo HOM05D007306 ORTHO05D009112 1.8e-22 109.8 144 49.3
ClCG10G017530 Citrullus lanatus HOM05D007306 ORTHO05D009112 3.0e-22 109.0 144 50.0
Phvul.007G259800 Phaseolus vulgaris HOM05D007306 ORTHO05D009112 8.8e-22 107.5 133 49.6
Aa31LG1G24110 Aethionema arabicum HOM05D007306 ORTHO05D009112 1.1e-21 107.1 136 52.2
CARHR137170 Cardamine hirsuta HOM05D007306 ORTHO05D009112 1.5e-21 106.7 136 52.2
HanXRQChr13g0390881 Helianthus annuus HOM05D007306 ORTHO05D009112 1.5e-21 106.7 147 45.6
AT2G42110 Arabidopsis thaliana HOM05D007306 ORTHO05D009112 2.0e-21 106.3 137 54.0
Sp4g24320 Schrenkiella parvula HOM05D007306 ORTHO05D009112 4.4e-21 105.1 140 49.3
Glyma.09G111500 Glycine max HOM05D007306 ORTHO05D009112 2.8e-20 102.4 144 48.6
Glyma.19G147700 Glycine max HOM05D007306 ORTHO05D009112 2.8e-20 102.4 133 51.1
Lsat_1_v5_gn_5_163480 Lactuca sativa HOM05D007306 ORTHO05D009112 4.8e-20 101.7 150 45.3
VMungo0720G2523 Vigna mungo HOM05D007306 ORTHO05D009112 4.8e-20 101.7 139 45.3
Carub.0004s2445 Capsella rubella HOM05D007306 ORTHO05D009112 2.0e-18 96.3 135 48.1
Ca_08521_v3 Cicer arietinum L. HOM05D007306 ORTHO05D009112 1.7e-17 93.2 114 57.0
AUR62012035 Chenopodium quinoa HOM05D007306 ORTHO05D009112 7.2e-16 87.8 145 43.4
ECA248G3448 Erigeron canadensis HOM05D007306 ORTHO05D009112 7.2e-16 87.8 144 38.2
AUR62015369 Chenopodium quinoa HOM05D007306 ORTHO05D009112 7.9e-15 84.3 161 42.9
CDE02G0820 Ceratophyllum demersum HOM05D007306 ORTHO05D009112 1.8e-14 83.2 133 41.4
THA.LOC104802563 Tarenaya hassleriana HOM05D007306 ORTHO05D009112 3.9e-14 82.0 133 42.1
Sc19g0007100 Simmondsia chinensis HOM05D007306 ORTHO05D009112 1.7e-12 76.6 111 45.9
ATR0807G086 Amborella trichopoda HOM05D007306 ORTHO05D009112 5.3e-11 71.6 133 39.8
EL10Ac3g06917 Beta vulgaris HOM05D007306 ORTHO05D009112 9.1e-11 70.9 161 33.5
CSS0009036 Camellia sinensis var. sinensis HOM05D007306 ORTHO05D009112 2.9e-09 65.9 90 42.2
Os03g0128300 Oryza sativa ssp. japonica HOM05D007306 ORTHO05D009112 5.0e-09 65.1 153 32.0
Ah.04g152480 Amaranthus hybridus HOM05D007306 ORTHO05D009112 4.2e-08 62.0 161 32.3
Sed0003989 Sechium edule HOM05D007306 ORTHO05D009112 4.2e-08 62.0 96 40.6
unitig_22.g6026 Utricularia gibba HOM05D007306 ORTHO05D009112 9.4e-08 60.8 130 36.9
CDE07G0177 Ceratophyllum demersum HOM05D064968 ORTHO05D009112 1.2e-07 60.5 116 36.2
Haze_19991 Corylus avellana HOM05D000267 ORTHO05D000298 1.4e-06 57.0 30 86.7


User provided reference genes

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