Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 1.0e-310 1069.3 570 100.0
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 4.2e-264 914.4 558 86.7
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 2.8e-260 901.7 553 86.4
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 5.5e-256 887.5 570 84.6
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 8.5e-241 837.0 570 76.3
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 1.2e-239 833.2 570 77.4
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 7.9e-239 830.5 570 77.9
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 3.0e-238 828.6 570 74.9
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 1.7e-236 822.8 570 76.7
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 6.9e-235 817.4 570 74.9
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 9.1e-235 817.0 570 74.7
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 4.5e-234 814.7 570 74.2
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 1.9e-232 809.3 569 75.6
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.2e-231 806.6 570 74.6
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.1e-231 805.8 570 76.1
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 7.9e-231 803.9 571 74.1
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 1.8e-230 802.7 570 74.6
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 1.8e-230 802.7 570 75.6
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 3.0e-230 802.0 570 73.3
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 8.8e-230 800.4 569 77.0
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 2.0e-229 799.3 570 74.6
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 5.7e-229 797.7 570 74.9
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 7.4e-229 797.3 570 75.4
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.8e-228 795.4 570 75.1
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.4e-227 793.1 585 73.7
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 2.4e-227 792.3 575 73.4
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 1.2e-226 790.0 570 73.9
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 2.0e-226 789.3 568 73.4
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 5.9e-226 787.7 570 72.5
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 1.0e-225 786.9 570 74.6
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 1.7e-225 786.2 570 72.8
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 5.0e-225 784.6 570 73.7
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 6.5e-225 784.3 570 73.9
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 1.5e-224 783.1 570 71.8
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 2.5e-224 782.3 570 72.8
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 4.2e-224 781.6 570 72.6
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 9.4e-224 780.4 570 74.6
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 1.2e-223 780.0 566 74.0
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 2.1e-223 779.2 571 72.5
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 3.6e-223 778.5 570 73.7
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 9.7e-221 770.4 567 71.8
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 9.7e-221 770.4 570 73.0
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 1.7e-220 769.6 570 71.1
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 1.1e-219 766.9 572 70.6
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 3.1e-219 765.4 642 65.9
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 7.0e-219 764.2 571 72.2
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 5.0e-217 758.1 570 70.9
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 8.5e-217 757.3 590 67.6
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 1.9e-216 756.1 569 69.9
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 3.6e-215 751.9 569 69.2
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 2.0e-213 746.1 568 69.5
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 4.8e-212 741.5 567 69.3
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 8.5e-209 730.7 569 67.5
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 3.6e-207 725.3 572 67.7
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 4.0e-206 721.8 568 69.0
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 3.4e-205 718.8 568 66.5
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 4.4e-205 718.4 567 67.7
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 7.5e-205 717.6 575 68.5
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 1.3e-204 716.8 588 64.8
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 2.8e-204 715.7 567 66.5
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 5.4e-203 711.4 564 67.2
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 2.3e-201 706.1 570 67.0
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 3.8e-201 705.3 570 67.2
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 5.0e-201 704.9 570 66.7
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 8.6e-201 704.1 569 66.1
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 3.3e-200 702.2 566 68.6
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 5.6e-200 701.4 570 66.7
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 6.1e-199 698.0 570 66.3
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 1.0e-198 697.2 569 65.7
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 1.0e-198 697.2 567 65.4
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 3.0e-198 695.7 567 65.4
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 4.0e-198 695.3 570 65.1
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 5.2e-198 694.9 570 66.3
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 2.0e-197 693.0 570 66.0
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 6.4e-196 688.0 571 65.3
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 3.2e-195 685.6 571 65.7
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 4.7e-191 671.8 571 64.4
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 1.0e-190 670.6 528 68.9
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 1.8e-190 669.8 570 65.1
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 1.1e-184 650.6 570 63.5
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 1.1e-184 650.6 570 63.5
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 2.5e-184 649.4 567 62.6
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 3.3e-184 649.0 570 63.3
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 8.1e-183 644.4 570 62.8
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 8.1e-183 644.4 570 63.0
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 8.1e-183 644.4 570 63.0
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 2.3e-182 642.9 569 61.9
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 1.5e-181 640.2 528 65.2
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 1.1e-179 634.0 509 67.4
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 7.3e-176 621.3 577 58.8
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 1.1e-174 617.5 575 56.9
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 4.4e-173 612.1 572 57.9
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 4.1e-171 605.5 486 66.0
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 1.6e-167 593.6 637 53.5
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 2.9e-164 582.8 527 61.5
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 3.8e-148 529.3 413 66.3
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 1.8e-126 457.2 452 58.6
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 6.5e-124 448.7 415 63.1
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 2.2e-116 423.7 585 42.7
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 1.9e-115 420.6 567 43.9
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 8.8e-105 385.2 600 39.3
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 8.2e-103 378.6 300 71.7
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 7.7e-101 372.1 235 81.3
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 1.5e-99 367.9 224 80.4
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 5.4e-94 349.4 572 38.6
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 9.1e-94 348.6 311 62.4
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 1.7e-92 344.4 590 37.5
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 7.2e-91 339.0 259 73.4
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 1.4e-73 281.6 264 57.6
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 3.9e-68 263.5 174 71.3
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 1.2e-66 258.5 380 46.3
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 2.1e-53 214.5 152 75.0
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 8.6e-52 209.1 592 31.8
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 4.9e-47 193.4 595 27.4
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 6.9e-41 172.9 157 67.5
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 3.0e-36 157.5 151 58.3
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.6e-26 125.2 71 78.9
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 1.4e-14 85.5 54 83.3
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 3.3e-11 74.3 52 65.4
THA.LOC104799305 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 1.8e-09 68.6 64 56.2


User provided reference genes

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