Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p020181 Quercus lobata HOM05D006942 ORTHO05D008737 9.7e-161 570.1 285 100.0
Haze_19409 Corylus avellana HOM05D006942 ORTHO05D008737 4.4e-113 411.8 318 69.8
Atru.chr2.1323 Acer truncatum HOM05D006942 ORTHO05D008737 3.7e-112 408.7 290 73.1
COL.COLO4_13617 Corchorus olitorius HOM05D006942 ORTHO05D008737 1.6e-110 403.3 292 70.5
Duzib177G1195 Durio zibethinus HOM05D006942 ORTHO05D008737 2.3e-109 399.4 295 69.8
CANSAT78G1082 Cannabis sativa HOM05D006942 ORTHO05D008737 3.8e-109 398.7 284 71.8
Thecc.05G293100 Theobroma cacao HOM05D006942 ORTHO05D008737 4.3e-108 395.2 295 71.5
Gorai.007G287900 Gossypium raimondii HOM05D006942 ORTHO05D008737 5.6e-108 394.8 292 70.5
ClCG10G013230 Citrullus lanatus HOM05D006942 ORTHO05D008737 9.8e-105 384.0 289 70.6
Gohir.D13G109500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 2.2e-104 382.9 285 69.5
Gorai.013G123100 Gossypium raimondii HOM05D006942 ORTHO05D008737 2.9e-104 382.5 285 69.5
Ciclev10021582m.g Citrus clementina HOM05D006942 ORTHO05D008737 4.9e-104 381.7 288 67.4
CsaV3_3G043400 Cucumis sativus L. HOM05D006942 ORTHO05D008737 8.3e-104 380.9 282 71.6
Nn7g35832 Nelumbo nucifera HOM05D006942 ORTHO05D008737 2.4e-103 379.4 293 66.9
Glyma.16G042200 Glycine max HOM05D006942 ORTHO05D008737 4.1e-103 378.6 287 71.8
Manes.08G149200 Manihot esculenta HOM05D006942 ORTHO05D008737 4.1e-103 378.6 285 69.5
TAR633G0669 Trochodendron aralioides HOM05D006942 ORTHO05D008737 5.4e-103 378.3 293 66.9
PGR042G3330 Punica granatum HOM05D006942 ORTHO05D008737 1.6e-102 376.7 285 67.4
Gohir.A13G105500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 2.7e-102 375.9 284 68.7
TWI34G0045 Tripterygium wilfordii HOM05D006942 ORTHO05D008737 2.7e-102 375.9 282 68.4
MELO3C026901.2 Cucumis melo HOM05D006942 ORTHO05D008737 4.6e-102 375.2 282 70.2
Potri.013G059500 Populus trichocarpa HOM05D006942 ORTHO05D008737 4.6e-102 375.2 285 69.1
Glyma.19G110300 Glycine max HOM05D006942 ORTHO05D008737 7.8e-102 374.4 290 70.3
arahy.Tifrunner.gnm1.ann1.0W916P Arachis hypogaea HOM05D006942 ORTHO05D008737 1.3e-101 373.6 299 66.2
Sed0013150 Sechium edule HOM05D006942 ORTHO05D008737 2.3e-101 372.9 287 70.0
TPR.G5873 Trifolium pratense HOM05D006942 ORTHO05D008737 2.3e-101 372.9 298 67.4
Nn2g15884 Nelumbo nucifera HOM05D002140 ORTHO05D008737 3.0e-101 372.5 289 65.7
Lj1g0019871 Lotus japonicus HOM05D006942 ORTHO05D008737 1.1e-100 370.5 290 66.9
FvH4_3g25250 Fragaria vesca HOM05D006942 ORTHO05D008737 4.3e-100 368.6 295 67.1
Phvul.001G109600 Phaseolus vulgaris HOM05D006942 ORTHO05D008737 4.3e-100 368.6 290 69.3
Rhsim04G0087000 Rhododendron simsii HOM05D006942 ORTHO05D008737 1.2e-99 367.1 284 67.3
vmacro09146 Vaccinium macrocarpon HOM05D006942 ORTHO05D008737 1.6e-99 366.7 286 67.5
Cpa.g.sc51.94 Carica papaya HOM05D006942 ORTHO05D008737 3.6e-99 365.5 302 65.9
Lalb_Chr24g0403081 Lupinus albus HOM05D006942 ORTHO05D008737 3.6e-99 365.5 282 69.5
THA.LOC104823787 Tarenaya hassleriana HOM05D006942 ORTHO05D008737 6.2e-99 364.8 295 65.4
Sed0025081 Sechium edule HOM05D006942 ORTHO05D008737 1.1e-98 364.0 282 67.7
Psat3g089160 Pisum sativum HOM05D006942 ORTHO05D008737 1.4e-98 363.6 293 68.6
VMungo1383G0897 Vigna mungo HOM05D006942 ORTHO05D008737 1.8e-98 363.2 283 68.2
FAN16G3006 Fragaria x ananassa HOM05D006942 ORTHO05D008737 2.3e-98 362.8 294 66.0
RcHm_v2.0_Chr5g0046891 Rosa chinensis HOM05D006942 ORTHO05D008737 2.3e-98 362.8 296 65.5
MBI11_g05460_MAGBIO Magnolia biondii HOM05D006942 ORTHO05D008737 3.1e-98 362.5 286 65.0
Eucgr.A02087 Eucalyptus grandis HOM05D006942 ORTHO05D008737 2.0e-97 359.8 285 65.6
FAN21G2944 Fragaria x ananassa HOM05D006942 ORTHO05D008737 2.6e-97 359.4 297 65.7
Sabra19G0041400 Salix brachista HOM05D006942 ORTHO05D008737 3.4e-97 359.0 286 67.8
AL1G64670 Arabidopsis lyrata HOM05D006942 ORTHO05D008737 2.2e-96 356.3 288 64.6
SpUn0001_1050 Schrenkiella parvula HOM05D006942 ORTHO05D008737 2.4e-95 352.8 296 63.2
MSTRG.19939 Avicennia marina HOM05D006942 ORTHO05D008737 5.4e-95 351.7 290 63.8
A09p19530 Brassica napus HOM05D006942 ORTHO05D008737 9.2e-95 350.9 278 65.5
MD12G1002500 Malus domestica HOM05D006942 ORTHO05D008737 2.7e-94 349.4 218 80.3
BcaC04g22009 Brassica carinata HOM05D006942 ORTHO05D008737 7.8e-94 347.8 278 65.1
C09p24900 Brassica napus HOM05D006942 ORTHO05D008737 7.8e-94 347.8 278 65.1
BolC9t55381H Brassica oleracea HOM05D006942 ORTHO05D008737 7.8e-94 347.8 278 65.1
GSVIVG01033386001 Vitis vinifera HOM05D006942 ORTHO05D008737 3.0e-93 345.9 183 88.5
BcaB07g31088 Brassica carinata HOM05D006942 ORTHO05D008737 3.9e-93 345.5 274 63.9
PSO339G1210 Papaver somniferum HOM05D006942 ORTHO05D008737 3.9e-93 345.5 290 65.5
Carub.0002s0962 Capsella rubella HOM05D006942 ORTHO05D008737 3.3e-92 342.4 282 62.8
DCAR_019882 Daucus carota HOM05D006942 ORTHO05D008737 3.3e-92 342.4 283 64.0
Medtr7g085420 Medicago truncatula HOM05D006942 ORTHO05D008737 3.3e-92 342.4 290 65.5
Peaxi162Scf00076g01036 Petunia axillaris HOM05D006942 ORTHO05D008737 4.3e-92 342.0 303 62.4
CARHR028870 Cardamine hirsuta HOM05D006942 ORTHO05D008737 1.2e-91 340.5 292 64.0
Eucgr.K01480 Eucalyptus grandis HOM05D006942 ORTHO05D008737 2.8e-91 339.3 288 61.8
Aqoxy2G00557 Aquilegia oxysepala HOM05D006942 ORTHO05D008737 4.7e-91 338.6 290 62.4
AT2G23840 Arabidopsis thaliana HOM05D006942 ORTHO05D008737 1.2e-89 334.0 290 61.0
Gohir.D11G268200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 2.0e-89 333.2 292 62.3
CDE10G0368 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 2.6e-89 332.8 283 61.5
Aa31LG2G1990 Aethionema arabicum HOM05D006942 ORTHO05D008737 5.8e-89 331.6 304 59.9
DCAR_009675 Daucus carota HOM05D006942 ORTHO05D008737 1.3e-88 330.5 283 65.0
Cc00_g08890 Coffea canephora HOM05D006942 ORTHO05D008737 2.2e-88 329.7 184 83.7
HPP92_018642 Vanilla planifolia HOM05D006942 ORTHO05D008737 6.4e-88 328.2 279 60.9
SGA_v2.0_scaffold50G18512 Striga asiatica HOM05D006942 ORTHO05D008737 8.3e-88 327.8 192 81.8
ECA233G4155 Erigeron canadensis HOM05D006942 ORTHO05D008737 1.1e-87 327.4 281 62.3
Thhalv10008350m.g Eutrema salsugineum HOM05D006942 ORTHO05D008737 7.1e-87 324.7 293 60.1
HanXRQChr13g0398101 Helianthus annuus HOM05D006942 ORTHO05D008737 2.1e-86 323.2 290 59.7
PGR142G1268 Punica granatum HOM05D006942 ORTHO05D008737 6.0e-86 321.6 283 59.7
Lsat_1_v5_gn_6_36781 Lactuca sativa HOM05D006942 ORTHO05D008737 7.8e-86 321.2 290 60.7
Migut.J01895 Erythranthe guttata HOM05D006942 ORTHO05D008737 1.0e-85 320.9 181 84.5
ATR0697G165 Amborella trichopoda HOM05D006942 ORTHO05D008737 3.9e-85 318.9 279 59.9
Lalb_Chr06g0173931 Lupinus albus HOM05D006942 ORTHO05D008737 8.6e-85 317.8 315 55.9
TAR623G0107 Trochodendron aralioides HOM05D002140 ORTHO05D002382 1.3e-80 303.9 167 85.6
CSS0046453 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 2.4e-79 299.7 289 57.1
EL10Ac3g06808 Beta vulgaris HOM05D006942 ORTHO05D008737 5.4e-79 298.5 350 50.0
CDE06G2457 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 1.2e-78 297.4 200 71.0
CiPaw.09G001300 Carya illinoinensis HOM05D006942 ORTHO05D008737 9.6e-76 287.7 152 90.1
Os07g0170200 Oryza sativa ssp. japonica HOM05D006942 ORTHO05D008737 5.3e-74 282.0 166 78.3
Prupe.7G002400 Prunus persica HOM05D006942 ORTHO05D008737 2.6e-73 279.6 161 82.6
Sabra13G0052800 Salix brachista HOM05D006942 ORTHO05D008737 8.4e-72 274.6 157 83.4
AUR62032674 Chenopodium quinoa HOM05D006942 ORTHO05D008737 1.3e-69 267.3 172 71.5
Duzib128G0620 Durio zibethinus HOM05D006942 ORTHO05D008737 3.3e-68 262.7 250 58.0
Sc13g0007650 Simmondsia chinensis HOM05D006942 ORTHO05D008737 4.3e-68 262.3 257 56.4
Lj2A357G77 Lonicera japonica HOM05D006942 ORTHO05D008737 7.3e-68 261.5 152 82.9
Manes.09G142700 Manihot esculenta HOM05D006942 ORTHO05D008737 1.3e-67 260.8 220 64.1
arahy.Tifrunner.gnm1.ann1.T4HPZA Arachis hypogaea HOM05D006942 ORTHO05D008737 2.1e-67 260.0 299 52.8
Actinidia38618 Actinidia chinensis HOM05D006942 ORTHO05D008737 6.2e-67 258.5 285 53.0
Ca_08258_v3 Cicer arietinum L. HOM05D006942 ORTHO05D008737 1.3e-64 250.8 148 80.4
AUR62032073 Chenopodium quinoa HOM05D006942 ORTHO05D008737 1.1e-60 237.7 166 68.1
Nitab4.5_0000911g0030 Nicotiana tabacum HOM05D006942 ORTHO05D008737 5.3e-58 228.8 236 56.4
Gohir.A11G258200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 6.4e-56 221.9 292 47.9
Pp3c12_13900 Physcomitrium patens HOM05D006942 ORTHO05D008737 2.1e-54 216.9 188 54.3
Pp3c4_7620 Physcomitrium patens HOM05D006942 ORTHO05D008737 2.7e-54 216.5 188 55.3
AagrBONN_evm.TU.Sc2ySwM_344.2088 Anthoceros agrestis HOM05D006942 ORTHO05D008737 6.0e-54 215.3 196 52.0
Mapoly0043s0076 Marchantia polymorpha HOM05D006942 ORTHO05D008737 2.3e-53 213.4 204 51.0
Ah.04g153240 Amaranthus hybridus HOM05D000653 ORTHO05D003117 6.9e-50 201.8 176 61.4
Potri.019G033200 Populus trichocarpa HOM05D006942 ORTHO05D008737 9.3e-47 191.4 285 43.9
SMO364G0530 Selaginella moellendorffii HOM05D006942 ORTHO05D008737 2.7e-46 189.9 192 47.9
unitig_85.g27430 Utricularia gibba HOM05D006942 ORTHO05D008737 7.9e-46 188.3 155 61.9
Oeu048436.1 Olea europaea HOM05D006942 ORTHO05D008737 6.7e-45 185.3 166 58.4
Hund24842 Selenicereus undatus HOM05D006942 ORTHO05D008737 1.4e-42 177.6 339 39.2
CBR_g603 Chara braunii HOM05D006942 ORTHO05D008737 1.3e-40 171.0 217 46.5
Actinidia17307 Actinidia chinensis HOM05D006942 ORTHO05D008737 3.9e-37 159.5 108 70.4
SalBow2G1960 Salvia bowleyana HOM05D006942 ORTHO05D008737 8.2e-35 151.8 106 68.9
PRCOL_00006758 Prasinoderma coloniale HOM05D006942 ORTHO05D008737 1.4e-34 151.0 184 44.6
Cre04.g217903 Chlamydomonas reinhardtii HOM05D006942 ORTHO05D008737 1.6e-30 137.5 176 40.3
SEGI_36650 Sequoiadendron giganteum HOM05D006942 ORTHO05D008737 3.6e-22 109.8 99 58.6
Zm00001eb300960 Zea mays HOM05D006942 ORTHO05D008737 2.7e-09 67.0 44 70.5
CSS0026826 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 4.2e-07 59.7 50 56.0
Pp3s30_1160 Physcomitrium patens HOM05D006942 ORTHO05D317230 3.6e-06 56.6 62 40.3


User provided reference genes

Program Settings