Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p020095 Quercus lobata HOM05D002672 ORTHO05D002887 1.9e-68 262.7 161 100.0
Sabra13G0052300 Salix brachista HOM05D002672 ORTHO05D002887 1.1e-41 173.7 149 65.8
Lj1g0022931 Lotus japonicus HOM05D002672 ORTHO05D002887 4.3e-41 171.8 149 63.8
TWI77G0420 Tripterygium wilfordii HOM05D002672 ORTHO05D002887 7.4e-41 171.0 149 64.4
Potri.013G058800 Populus trichocarpa HOM05D002672 ORTHO05D002887 9.6e-41 170.6 149 64.4
Potri.019G033800 Populus trichocarpa HOM05D002672 ORTHO05D002887 9.6e-41 170.6 149 65.1
GSVIVG01033390001 Vitis vinifera HOM05D002672 ORTHO05D002887 9.6e-41 170.6 149 65.1
MD14G1002200 Malus domestica HOM05D002672 ORTHO05D002887 1.3e-40 170.2 149 67.1
TPR.G5877 Trifolium pratense HOM05D002672 ORTHO05D002887 1.6e-40 169.9 149 68.5
Actinidia22088 Actinidia chinensis HOM05D002672 ORTHO05D002887 2.1e-40 169.5 149 64.4
CiPaw.09G001400 Carya illinoinensis HOM05D002672 ORTHO05D002887 2.1e-40 169.5 150 71.3
Medtr7g085450 Medicago truncatula HOM05D002672 ORTHO05D002887 2.8e-40 169.1 152 62.5
Rhsim03G0001100 Rhododendron simsii HOM05D002672 ORTHO05D002887 2.8e-40 169.1 149 63.1
VMungo1383G1105 Vigna mungo HOM05D002672 ORTHO05D002887 2.8e-40 169.1 152 63.2
Ciclev10021354m.g Citrus clementina HOM05D002672 ORTHO05D002887 4.8e-40 168.3 149 65.1
TWI74G0403 Tripterygium wilfordii HOM05D002672 ORTHO05D002887 4.8e-40 168.3 149 63.1
Phvul.001G109900 Phaseolus vulgaris HOM05D002672 ORTHO05D002887 8.2e-40 167.5 152 62.5
Glyma.19G110500 Glycine max HOM05D002672 ORTHO05D002887 1.1e-39 167.2 152 62.5
Dinv37010 Davidia involucrata HOM05D002672 ORTHO05D002887 2.4e-39 166.0 149 63.1
Lalb_Chr14g0364451 Lupinus albus HOM05D002672 ORTHO05D002887 2.4e-39 166.0 157 59.9
Atru.chr2.1366 Acer truncatum HOM05D002672 ORTHO05D002887 4.0e-39 165.2 149 63.8
MELO3C008797.2 Cucumis melo HOM05D002672 ORTHO05D002887 4.0e-39 165.2 150 63.3
Ca_08259_v3 Cicer arietinum L. HOM05D002672 ORTHO05D002887 6.9e-39 164.5 149 63.1
Thhalv10003462m.g Eutrema salsugineum HOM05D002672 ORTHO05D002887 6.9e-39 164.5 149 61.7
AL1G64630 Arabidopsis lyrata HOM05D002672 ORTHO05D002887 9.0e-39 164.1 149 61.1
AT1G54390 Arabidopsis thaliana HOM05D002672 ORTHO05D002887 9.0e-39 164.1 149 61.1
Sed0007674 Sechium edule HOM05D002672 ORTHO05D002887 1.5e-38 163.3 149 61.7
Carub.0002s0957 Capsella rubella HOM05D002672 ORTHO05D002887 2.0e-38 162.9 149 61.1
CARHR055500 Cardamine hirsuta HOM05D002672 ORTHO05D002887 2.0e-38 162.9 149 61.1
Manes.08G150000 Manihot esculenta HOM05D002672 ORTHO05D002887 2.0e-38 162.9 149 61.7
Cpa.g.sc51.101 Carica papaya HOM05D002672 ORTHO05D002887 3.4e-38 162.2 149 61.1
Psat3g089120 Pisum sativum HOM05D002672 ORTHO05D002887 3.4e-38 162.2 149 65.8
arahy.Tifrunner.gnm1.ann1.53N7TD Arachis hypogaea HOM05D002672 ORTHO05D002887 4.5e-38 161.8 149 65.1
arahy.Tifrunner.gnm1.ann1.6BXT91 Arachis hypogaea HOM05D002672 ORTHO05D002887 4.5e-38 161.8 149 65.1
CsaV3_4G013320 Cucumis sativus L. HOM05D002672 ORTHO05D002887 4.5e-38 161.8 150 62.0
A04p09620 Brassica napus HOM05D002672 ORTHO05D002887 5.8e-38 161.4 151 61.6
BraA04t16621Z Brassica rapa HOM05D002672 ORTHO05D002887 5.8e-38 161.4 151 61.6
ClCG04G005270 Citrullus lanatus HOM05D002672 ORTHO05D002887 5.8e-38 161.4 150 62.0
Sp7g07100 Schrenkiella parvula HOM05D002672 ORTHO05D002887 5.8e-38 161.4 149 60.4
PGR142G0008 Punica granatum HOM05D002672 ORTHO05D002887 1.0e-37 160.6 149 61.7
arahy.Tifrunner.gnm1.ann1.SA2BAT Arachis hypogaea HOM05D002672 ORTHO05D002887 1.3e-37 160.2 149 64.4
Sabra19G0041700 Salix brachista HOM05D002672 ORTHO05D002887 1.7e-37 159.8 149 60.4
Actinidia30558 Actinidia chinensis HOM05D002672 ORTHO05D002887 2.2e-37 159.5 149 61.7
AUR62032684 Chenopodium quinoa HOM05D002672 ORTHO05D002887 2.9e-37 159.1 149 60.4
Prupe.7G003300 Prunus persica HOM05D002672 ORTHO05D002887 3.8e-37 158.7 149 66.4
Aa31LG2G1980 Aethionema arabicum HOM05D002672 ORTHO05D002887 6.5e-37 157.9 149 58.4
Eucgr.A02091 Eucalyptus grandis HOM05D002672 ORTHO05D002887 6.5e-37 157.9 149 59.1
Sc19g0006480 Simmondsia chinensis HOM05D002672 ORTHO05D002887 6.5e-37 157.9 149 59.7
BcaB06g26927 Brassica carinata HOM05D002672 ORTHO05D002887 8.4e-37 157.5 149 59.1
Nn2g15174 Nelumbo nucifera HOM05D002672 ORTHO05D002887 8.4e-37 157.5 149 59.1
THA.LOC104823784 Tarenaya hassleriana HOM05D002672 ORTHO05D002887 1.1e-36 157.1 149 60.4
AUR62032064 Chenopodium quinoa HOM05D002672 ORTHO05D002887 1.4e-36 156.8 149 59.1
Thecc.05G293600 Theobroma cacao HOM05D002672 ORTHO05D002887 2.5e-36 156.0 149 60.4
CSS0007216 Camellia sinensis var. sinensis HOM05D002672 ORTHO05D002887 9.3e-36 154.1 160 70.6
COL.COLO4_13611 Corchorus olitorius HOM05D002672 ORTHO05D002887 9.3e-36 154.1 142 62.0
Migut.D01187 Erythranthe guttata HOM05D002672 ORTHO05D002887 9.3e-36 154.1 149 58.4
Gohir.A11G258600 Gossypium hirsutum HOM05D002672 ORTHO05D002887 9.3e-36 154.1 149 59.1
Gohir.D11G268700 Gossypium hirsutum HOM05D002672 ORTHO05D002887 9.3e-36 154.1 149 59.1
Gorai.007G288500 Gossypium raimondii HOM05D002672 ORTHO05D002887 9.3e-36 154.1 149 59.1
HanXRQChr01g0024701 Helianthus annuus HOM05D002672 ORTHO05D002887 9.3e-36 154.1 149 59.7
Lj1A1137T84 Lonicera japonica HOM05D002672 ORTHO05D002887 9.3e-36 154.1 149 61.1
BcaC02g09472 Brassica carinata HOM05D002672 ORTHO05D002887 1.2e-35 153.7 149 59.1
C04p43190 Brassica napus HOM05D002672 ORTHO05D002887 1.2e-35 153.7 149 59.1
BolC4t25896H Brassica oleracea HOM05D002672 ORTHO05D002887 1.2e-35 153.7 149 59.1
CiPaw.10G000600 Carya illinoinensis HOM05D002672 ORTHO05D002887 1.6e-35 153.3 149 71.8
Migut.C00472 Erythranthe guttata HOM05D002672 ORTHO05D002887 2.1e-35 152.9 149 57.7
PGR042G0488 Punica granatum HOM05D002672 ORTHO05D002887 2.1e-35 152.9 149 57.7
Duzib177G0497 Durio zibethinus HOM05D002672 ORTHO05D002887 4.6e-35 151.8 149 58.4
Lsat_1_v5_gn_1_59540 Lactuca sativa HOM05D002672 ORTHO05D002887 4.6e-35 151.8 149 59.1
EL10Ac3g06813 Beta vulgaris HOM05D002672 ORTHO05D002887 6.0e-35 151.4 149 58.4
Oeu003210.1 Olea europaea HOM05D002672 ORTHO05D002887 6.0e-35 151.4 155 58.1
vmacro12572 Vaccinium macrocarpon HOM05D002672 ORTHO05D002887 6.0e-35 151.4 158 57.0
Haze_11185 Corylus avellana HOM05D002672 ORTHO05D002887 7.9e-35 151.0 149 69.8
ECA285G0009 Erigeron canadensis HOM05D002672 ORTHO05D002887 7.9e-35 151.0 149 58.4
Peaxi162Scf00003g04833 Petunia axillaris HOM05D002672 ORTHO05D002887 7.9e-35 151.0 149 58.4
Oeu003209.1 Olea europaea HOM05D002672 ORTHO05D002887 1.0e-34 150.6 143 62.2
Oeu003208.1 Olea europaea HOM05D002672 ORTHO05D002887 1.8e-34 149.8 136 63.2
Haze_11190 Corylus avellana HOM05D002672 ORTHO05D002887 2.3e-34 149.4 149 69.8
Nitab4.5_0007223g0020 Nicotiana tabacum HOM05D002672 ORTHO05D002887 2.3e-34 149.4 149 57.7
Nitab4.5_0008228g0020 Nicotiana tabacum HOM05D002672 ORTHO05D002887 2.3e-34 149.4 149 57.7
Solyc10g078520.2 Solanum lycopersicum HOM05D002672 ORTHO05D002887 2.3e-34 149.4 149 58.4
Sopen10g029170 Solanum pennellii HOM05D002672 ORTHO05D002887 2.3e-34 149.4 149 58.4
PGSC0003DMG400008367 Solanum tuberosum HOM05D002672 ORTHO05D002887 2.3e-34 149.4 149 58.4
RcHm_v2.0_Chr3g0497201 Rosa chinensis HOM05D002672 ORTHO05D002887 3.0e-34 149.1 149 59.1
TAR254G0001 Trochodendron aralioides HOM05D002672 ORTHO05D002887 3.0e-34 149.1 139 59.0
MSTRG.27677 Avicennia marina HOM05D002672 ORTHO05D002887 3.9e-34 148.7 149 57.0
FvH4_1g28050 Fragaria vesca HOM05D002672 ORTHO05D002887 3.9e-34 148.7 149 59.7
Aqoxy2G00200 Aquilegia oxysepala HOM05D002672 ORTHO05D002887 5.1e-34 148.3 149 58.4
CAN.G960.51 Capsicum annuum HOM05D002672 ORTHO05D002887 5.1e-34 148.3 149 57.0
CDE10G0048 Ceratophyllum demersum HOM05D002672 ORTHO05D002887 6.7e-34 147.9 149 55.7
CANSAT78G2220 Cannabis sativa HOM05D002672 ORTHO05D002887 2.5e-33 146.0 154 70.1
Aqoxy1G00499 Aquilegia oxysepala HOM05D002672 ORTHO05D002887 3.3e-33 145.6 149 57.7
CDE10G0711 Ceratophyllum demersum HOM05D002672 ORTHO05D002887 3.3e-33 145.6 149 55.0
DCAR_016869 Daucus carota HOM05D002672 ORTHO05D002887 3.3e-33 145.6 149 57.7
TAR623G0799 Trochodendron aralioides HOM05D002672 ORTHO05D002887 3.3e-33 145.6 149 55.7
HanXRQChr03g0090411 Helianthus annuus HOM05D002672 ORTHO05D002887 4.3e-33 145.2 149 57.0
FAN23G2462 Fragaria x ananassa HOM05D002672 ORTHO05D002887 5.7e-33 144.8 149 57.7
FAN26G1451 Fragaria x ananassa HOM05D002672 ORTHO05D002887 5.7e-33 144.8 149 57.7
ATR0697G210 Amborella trichopoda HOM05D002672 ORTHO05D002887 7.4e-33 144.4 149 55.0
PSO063G3245 Papaver somniferum HOM05D002672 ORTHO05D002887 2.2e-32 142.9 150 56.7
PSO339G0446 Papaver somniferum HOM05D002672 ORTHO05D002887 2.2e-32 142.9 150 56.7
Duzib106G0634 Durio zibethinus HOM05D002672 ORTHO05D002887 6.3e-32 141.4 149 55.0
DCAR_009678 Daucus carota HOM05D002672 ORTHO05D002887 1.1e-31 140.6 151 57.0
Cc00_g05140 Coffea canephora HOM05D002672 ORTHO05D002887 1.8e-31 139.8 149 54.4
FvH4_7g02040 Fragaria vesca HOM05D002672 ORTHO05D002887 3.1e-31 139.0 149 56.4
FAN06G3050 Fragaria x ananassa HOM05D003775 ORTHO05D004314 4.1e-31 138.7 149 56.4
DCAR_013691 Daucus carota HOM05D002672 ORTHO05D002887 4.5e-30 135.2 149 53.0
Mapoly0099s0054 Marchantia polymorpha HOM05D002672 ORTHO05D002887 5.0e-29 131.7 149 51.7
SEGI_38200 Sequoiadendron giganteum HOM05D002672 ORTHO05D002887 1.9e-28 129.8 149 51.0
HPP92_009426 Vanilla planifolia HOM05D002672 ORTHO05D002887 2.7e-27 125.9 149 49.0
Os03g0748200 Oryza sativa ssp. japonica HOM05D002672 ORTHO05D002887 1.3e-26 123.6 149 47.7
SEGI_33253 Sequoiadendron giganteum HOM05D002672 ORTHO05D002887 1.8e-26 123.2 130 53.1
Zm00001eb057160 Zea mays HOM05D002672 ORTHO05D002887 4.3e-25 118.6 149 46.3
SGA_v2.0_scaffold59G20726 Striga asiatica HOM05D002672 ORTHO05D002887 5.7e-25 118.2 136 53.7
AagrBONN_evm.TU.Sc2ySwM_362.1458 Anthoceros agrestis HOM05D002672 ORTHO05D002887 3.7e-24 115.5 149 47.0
SMO116G0117 Selaginella moellendorffii HOM05D002672 ORTHO05D002887 4.1e-23 112.1 149 46.3
Pp3c17_17740 Physcomitrium patens HOM05D002672 ORTHO05D002887 8.5e-21 104.4 147 44.9
CBR_g34558 Chara braunii HOM05D002672 ORTHO05D002887 8.5e-13 77.8 134 38.1
Haze_19412 Corylus avellana HOM05D003349 ORTHO05D003898 1.4e-12 77.0 39 97.4
SHI00537 Sapria himalayana HOM05D002672 ORTHO05D002887 2.5e-12 76.3 92 48.9
FAN03G1589 Fragaria x ananassa HOM05D002672 ORTHO05D002887 5.2e-10 68.6 109 44.0
CANSAT78G2266 Cannabis sativa HOM05D002672 ORTHO05D002887 7.0e-07 58.2 48 64.6
FAN10G0774 Fragaria x ananassa HOM05D002672 ORTHO05D002887 1.6e-06 57.0 45 71.1


User provided reference genes

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