Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p019855 Quercus lobata HOM05D000184 ORTHO05D000032 1.2e-77 293.1 148 100.0
Actinidia11581 Actinidia chinensis HOM05D000544 ORTHO05D000479 3.2e-30 135.6 193 44.0
CSS0019219 Camellia sinensis var. sinensis HOM05D000184 ORTHO05D000032 3.5e-29 132.1 193 43.0
Cfa017198 Carpinus fangiana HOM05D000184 ORTHO05D000032 3.5e-29 132.1 176 50.6
Potri.016G117000 Populus trichocarpa HOM05D000184 ORTHO05D000032 1.1e-27 127.1 191 43.5
Hma1.2p1_0362F.1_g136340 Hydrangea macrophylla HOM05D000184 ORTHO05D000032 2.8e-26 122.5 193 41.5
Ciclev10013453m.g Citrus clementina HOM05D000184 ORTHO05D000032 6.2e-26 121.3 193 40.9
Potri.006G101000 Populus trichocarpa HOM05D000184 ORTHO05D000032 2.2e-23 112.8 198 38.4
Actinidia20737 Actinidia chinensis HOM05D000184 ORTHO05D000032 1.2e-21 107.1 172 42.4
QL07p035601 Quercus lobata HOM05D000184 ORTHO05D000032 1.6e-21 106.7 64 85.9
Actinidia29096 Actinidia chinensis HOM05D000544 ORTHO05D000032 3.9e-20 102.1 188 37.2
Duzib093G1213 Durio zibethinus HOM05D000184 ORTHO05D000032 3.3e-19 99.0 193 36.8
TWI74G1535 Tripterygium wilfordii HOM05D000184 ORTHO05D000032 7.3e-19 97.8 200 39.5
DCAR_028852 Daucus carota HOM05D000544 ORTHO05D000479 1.2e-18 97.1 195 36.9
Cpa.g.c34762 Carica papaya HOM05D000184 ORTHO05D000032 1.6e-18 96.7 199 35.2
TWI53G0932 Tripterygium wilfordii HOM05D000184 ORTHO05D000032 8.1e-18 94.4 185 37.8
Gohir.D09G161100 Gossypium hirsutum HOM05D000184 ORTHO05D000032 1.4e-17 93.6 205 34.6
Cc06_g01270 Coffea canephora HOM05D000184 ORTHO05D000032 8.9e-17 90.9 192 37.0
Gorai.006G182800 Gossypium raimondii HOM05D000184 ORTHO05D000032 2.0e-16 89.7 205 32.7
Atru.chr8.2251 Acer truncatum HOM05D000184 ORTHO05D000032 4.4e-16 88.6 204 34.8
Gohir.A09G165500 Gossypium hirsutum HOM05D000184 ORTHO05D000032 4.4e-16 88.6 207 33.8
Lsat_1_v5_gn_5_150340 Lactuca sativa HOM05D000184 ORTHO05D000032 7.5e-16 87.8 195 32.3
Manes.09G105800 Manihot esculenta HOM05D000184 ORTHO05D000032 7.5e-16 87.8 197 33.5
COL.COLO4_14528 Corchorus olitorius HOM05D000184 ORTHO05D000032 9.9e-16 87.4 201 34.3
PGR031G0832 Punica granatum HOM05D000184 ORTHO05D000032 9.9e-16 87.4 203 36.0
Dinv13391 Davidia involucrata HOM05D000184 ORTHO05D000032 1.3e-15 87.0 56 78.6
GSVIVG01011163001 Vitis vinifera HOM05D000184 ORTHO05D000032 1.7e-15 86.7 64 70.3
Thecc.05G015300 Theobroma cacao HOM05D000184 ORTHO05D000032 4.9e-15 85.1 182 34.6
HanXRQChr12g0375411 Helianthus annuus HOM05D000184 ORTHO05D000032 5.4e-14 81.6 194 30.9
Prupe.6G278300 Prunus persica HOM05D000184 ORTHO05D000032 1.6e-13 80.1 194 35.6
ECA248G3156 Erigeron canadensis HOM05D000184 ORTHO05D000032 4.6e-13 78.6 192 31.8
Dinv23129 Davidia involucrata HOM05D000184 ORTHO05D000032 1.0e-12 77.4 75 50.7
arahy.Tifrunner.gnm1.ann1.V5WQ77 Arachis hypogaea HOM05D000184 ORTHO05D000032 3.0e-12 75.9 55 67.3
Sopen09g001330 Solanum pennellii HOM05D000012 ORTHO05D000567 3.0e-12 75.9 58 63.8
TAR633G2660 Trochodendron aralioides HOM05D000184 ORTHO05D000032 3.0e-12 75.9 230 30.0
DCAR_015408 Daucus carota HOM05D000184 ORTHO05D000032 5.1e-12 75.1 54 66.7
FvH4_6g11361 Fragaria vesca HOM05D000184 ORTHO05D000032 5.1e-12 75.1 205 35.1
FAN14G4403 Fragaria x ananassa HOM05D000184 ORTHO05D000032 5.1e-12 75.1 205 35.1
Medtr7g068600 Medicago truncatula HOM05D000184 ORTHO05D000032 6.6e-12 74.7 64 60.9
TPR.G8426 Trifolium pratense HOM05D000184 ORTHO05D000032 1.5e-11 73.6 59 61.0
Aqoxy2G00876 Aquilegia oxysepala HOM05D000184 ORTHO05D000032 2.5e-11 72.8 58 63.8
FAN14G5163 Fragaria x ananassa HOM05D000184 ORTHO05D000032 2.5e-11 72.8 62 64.5
PSO339G3024 Papaver somniferum HOM05D000184 ORTHO05D000032 2.5e-11 72.8 58 63.8
Psat3g129440 Pisum sativum HOM05D000184 ORTHO05D000032 2.5e-11 72.8 64 57.8
arahy.Tifrunner.gnm1.ann1.Z0WZ2G Arachis hypogaea HOM05D000184 ORTHO05D000032 3.3e-11 72.4 54 66.7
FAN02G4066 Fragaria x ananassa HOM05D000184 ORTHO05D000032 5.6e-11 71.6 189 34.4
FAN09G2474 Fragaria x ananassa HOM05D000184 ORTHO05D000032 5.6e-11 71.6 60 65.0
Lj1g0004886 Lotus japonicus HOM05D051549 ORTHO05D000032 7.3e-11 71.2 57 57.9
RcHm_v2.0_Chr3g0462991 Rosa chinensis HOM05D000184 ORTHO05D000032 7.3e-11 71.2 63 61.9
SalBow7G3593 Salvia bowleyana HOM05D000184 ORTHO05D000032 2.1e-10 69.7 182 33.5
Glyma.18G201800 Glycine max HOM05D000184 ORTHO05D000032 2.8e-10 69.3 184 31.5
FAN05G3166 Fragaria x ananassa HOM05D000184 ORTHO05D000032 4.7e-10 68.6 59 64.4
Phvul.008G103100 Phaseolus vulgaris HOM05D000184 ORTHO05D000032 8.1e-10 67.8 185 30.8
Migut.L02017 Erythranthe guttata HOM05D000184 ORTHO05D000032 1.8e-09 66.6 199 29.1
Oeu029411.1 Olea europaea HOM05D000184 ORTHO05D000032 2.4e-09 66.2 62 56.5
PGSC0003DMG400023079 Solanum tuberosum HOM05D000184 ORTHO05D000032 3.1e-09 65.9 112 42.0
TWI77G0291 Tripterygium wilfordii HOM05D000184 ORTHO05D000032 4.0e-09 65.5 75 48.0
TAR636G3097 Trochodendron aralioides HOM05D000184 ORTHO05D000032 4.0e-09 65.5 54 57.4
Oeu028409.1 Olea europaea HOM05D000184 ORTHO05D000032 3.4e-08 62.4 88 45.5
Sabra06G0077700 Salix brachista HOM05D000184 ORTHO05D000032 5.8e-08 61.6 97 40.2
Glyma.07G150850 Glycine max HOM05D000002 ORTHO05D000047 1.1e-06 57.4 55 52.7


User provided reference genes

Program Settings