Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p014155 Quercus lobata HOM05D004369 ORTHO05D004907 1.3e-129 466.5 238 100.0
Haze_20292 Corylus avellana HOM05D004369 ORTHO05D004907 1.0e-67 260.8 247 63.6
Cfa019946 Carpinus fangiana HOM05D004369 ORTHO05D004907 2.3e-67 259.6 247 64.0
CiPaw.09G052400 Carya illinoinensis HOM05D004369 ORTHO05D004907 1.4e-64 250.4 252 61.9
CiPaw.10G044100 Carya illinoinensis HOM05D004369 ORTHO05D004907 3.7e-57 225.7 230 61.3
Prupe.6G310500 Prunus persica HOM05D004369 ORTHO05D004907 1.4e-56 223.8 265 57.4
MD04G1191900 Malus domestica HOM05D004369 ORTHO05D004907 3.5e-55 219.2 262 55.3
Atru.chr1.1512 Acer truncatum HOM05D004369 ORTHO05D004907 5.0e-54 215.3 252 56.0
TWI74G0038 Tripterygium wilfordii HOM05D004369 ORTHO05D004907 2.1e-52 209.9 257 53.7
Lalb_Chr22g0357981 Lupinus albus HOM05D004369 ORTHO05D004907 2.8e-52 209.5 245 57.1
Duzib106G1975 Durio zibethinus HOM05D004369 ORTHO05D004907 6.2e-52 208.4 247 57.1
Potri.016G029600 Populus trichocarpa HOM05D004369 ORTHO05D004907 3.4e-50 202.6 277 51.6
Sabra16G0033500 Salix brachista HOM05D004369 ORTHO05D004907 1.1e-48 197.6 277 51.3
Thecc.05G119700 Theobroma cacao HOM05D004369 ORTHO05D004907 1.1e-48 197.6 265 52.8
Dinv06038 Davidia involucrata HOM05D004369 ORTHO05D004907 3.2e-48 196.1 244 51.2
Lj1g0025044 Lotus japonicus HOM05D004369 ORTHO05D004907 9.2e-48 194.5 256 52.0
Manes.08G065900 Manihot esculenta HOM05D004369 ORTHO05D004907 1.2e-47 194.1 258 51.6
Psat0ss9348g0120 Pisum sativum HOM05D004369 ORTHO05D004907 1.2e-47 194.1 254 52.0
Ciclev10012618m.g Citrus clementina HOM05D004369 ORTHO05D004907 3.5e-47 192.6 256 50.8
Potri.006G032300 Populus trichocarpa HOM05D004369 ORTHO05D004907 1.3e-46 190.7 282 50.4
Cpa.g.sc33.191 Carica papaya HOM05D004369 ORTHO05D004907 3.9e-46 189.1 249 52.2
Sabra06G0021600 Salix brachista HOM05D004369 ORTHO05D004907 6.6e-46 188.3 274 49.6
FvH4_6g07790 Fragaria vesca HOM05D004369 ORTHO05D004907 1.1e-45 187.6 256 51.2
TWI53G1196 Tripterygium wilfordii HOM05D004369 ORTHO05D004907 1.5e-45 187.2 254 52.4
Ca_08356_v3 Cicer arietinum L. HOM05D004369 ORTHO05D004907 2.5e-45 186.4 263 52.1
Nn7g37071 Nelumbo nucifera HOM05D004369 ORTHO05D004907 3.3e-45 186.0 254 51.2
ClCG10G016480 Citrullus lanatus HOM05D004369 ORTHO05D004907 4.3e-45 185.7 255 51.4
Lalb_Chr14g0365411 Lupinus albus HOM05D004369 ORTHO05D004907 4.3e-45 185.7 252 50.4
FAN14G1324 Fragaria x ananassa HOM05D002683 ORTHO05D007757 1.2e-44 184.1 257 50.2
MBI13_g13129_MAGBIO Magnolia biondii HOM05D004369 ORTHO05D004907 2.1e-44 183.3 248 49.6
FAN09G2868 Fragaria x ananassa HOM05D004369 ORTHO05D004907 3.6e-44 182.6 257 50.6
Medtr7g088620 Medicago truncatula HOM05D004369 ORTHO05D004907 3.6e-44 182.6 251 51.8
DCAR_013523 Daucus carota HOM05D004369 ORTHO05D004907 1.8e-43 180.3 251 47.0
PGR142G3989 Punica granatum HOM05D004369 ORTHO05D004907 1.8e-43 180.3 270 47.4
TAR623G1559 Trochodendron aralioides HOM05D004369 ORTHO05D004907 2.3e-43 179.9 251 49.4
VMungo1383G1978 Vigna mungo HOM05D004369 ORTHO05D004907 3.1e-43 179.5 255 52.9
Glyma.19G125300 Glycine max HOM05D004369 ORTHO05D004907 4.0e-43 179.1 251 51.4
CSS0041918 Camellia sinensis var. sinensis HOM05D004369 ORTHO05D004907 1.2e-42 177.6 248 47.6
Duzib128G0931 Durio zibethinus HOM05D004369 ORTHO05D004907 3.4e-42 176.0 247 51.0
Manes.09G001100 Manihot esculenta HOM05D004369 ORTHO05D004907 1.7e-41 173.7 254 48.0
Glyma.03G120700 Glycine max HOM05D004369 ORTHO05D004907 4.9e-41 172.2 254 50.0
FAN02G1899 Fragaria x ananassa HOM05D002683 ORTHO05D007757 6.4e-41 171.8 260 48.8
Cc00_g08990 Coffea canephora HOM05D004369 ORTHO05D004907 1.1e-40 171.0 254 49.2
RhsimUnG0020900 Rhododendron simsii HOM05D004369 ORTHO05D004907 2.4e-40 169.9 257 46.7
MELO3C009728.2 Cucumis melo HOM05D004369 ORTHO05D004907 3.5e-39 166.0 255 49.4
Phvul.001G116900 Phaseolus vulgaris HOM05D004369 ORTHO05D004907 7.8e-39 164.9 253 49.8
RcHm_v2.0_Chr3g0457501 Rosa chinensis HOM05D004369 ORTHO05D004907 2.3e-38 163.3 189 57.1
CiPaw.12G092400 Carya illinoinensis HOM05D004369 ORTHO05D004907 6.6e-38 161.8 176 59.7
CsaV3_3G039860 Cucumis sativus L. HOM05D004369 ORTHO05D004907 1.1e-37 161.0 253 48.2
Gohir.A01G192900 Gossypium hirsutum HOM05D004369 ORTHO05D004907 4.3e-37 159.1 245 47.8
Phvul.002G069001 Phaseolus vulgaris HOM05D004369 ORTHO05D004907 1.6e-36 157.1 235 51.5
Gohir.D01G183200 Gossypium hirsutum HOM05D004369 ORTHO05D004907 8.1e-36 154.8 246 48.4
Gorai.002G226300 Gossypium raimondii HOM05D004369 ORTHO05D004907 8.1e-36 154.8 245 47.3
Actinidia37863 Actinidia chinensis HOM05D004369 ORTHO05D004907 1.4e-35 154.1 240 45.0
MSTRG.19768 Avicennia marina HOM05D004369 ORTHO05D004907 6.8e-35 151.8 251 42.2
Nitab4.5_0000123g0220 Nicotiana tabacum HOM05D004369 ORTHO05D004907 1.2e-34 151.0 238 45.8
TPR.G22743 Trifolium pratense HOM05D004369 ORTHO05D004907 1.2e-34 151.0 195 56.4
Sc19g0007900 Simmondsia chinensis HOM05D004369 ORTHO05D004907 2.6e-34 149.8 248 45.6
Gorai.007G351100 Gossypium raimondii HOM05D004369 ORTHO05D004907 3.4e-34 149.4 236 43.6
Gohir.D11G320900 Gossypium hirsutum HOM05D004369 ORTHO05D004907 1.7e-33 147.1 236 43.2
Nitab4.5_0001270g0170 Nicotiana tabacum HOM05D004369 ORTHO05D004907 6.4e-33 145.2 238 45.8
Gohir.A11G305500 Gossypium hirsutum HOM05D004369 ORTHO05D004907 1.9e-32 143.7 236 42.8
BolC8t50831H Brassica oleracea HOM05D004369 ORTHO05D004907 3.2e-32 142.9 255 42.4
AT3G56880 Arabidopsis thaliana HOM05D004369 ORTHO05D004907 1.2e-31 141.0 260 40.8
A09p49750 Brassica napus HOM05D004369 ORTHO05D004907 1.2e-31 141.0 254 40.9
BraA09t40428Z Brassica rapa HOM05D004369 ORTHO05D004907 1.2e-31 141.0 254 40.9
BcaC07g40000 Brassica carinata HOM05D004369 ORTHO05D004907 1.6e-31 140.6 255 41.6
C08p32120 Brassica napus HOM05D004369 ORTHO05D004907 1.6e-31 140.6 255 41.6
MSTRG.6296 Avicennia marina HOM05D004369 ORTHO05D004907 2.7e-31 139.8 251 39.8
Eucgr.K01686 Eucalyptus grandis HOM05D004369 ORTHO05D004907 6.0e-31 138.7 284 40.1
Sp4g23330 Schrenkiella parvula HOM05D004369 ORTHO05D004907 6.0e-31 138.7 258 41.9
THA.LOC104803243 Tarenaya hassleriana HOM05D004369 ORTHO05D004907 6.0e-31 138.7 252 39.7
Ah.13g077330 Amaranthus hybridus HOM05D004369 ORTHO05D004907 7.8e-31 138.3 253 42.3
Ah.04g150390 Amaranthus hybridus HOM05D004369 ORTHO05D004907 1.3e-30 137.5 238 41.6
PGR042G0777 Punica granatum HOM05D004369 ORTHO05D004907 1.3e-30 137.5 241 44.4
PGSC0003DMG400007200 Solanum tuberosum HOM05D004369 ORTHO05D004907 1.3e-30 137.5 239 41.0
THA.LOC104824387 Tarenaya hassleriana HOM05D004369 ORTHO05D004907 1.3e-30 137.5 265 41.5
SalBow6G6868 Salvia bowleyana HOM05D004369 ORTHO05D004907 2.3e-30 136.7 240 43.3
Thhalv10017173m.g Eutrema salsugineum HOM05D004369 ORTHO05D004907 1.5e-29 134.0 257 40.9
Oeu009515.1 Olea europaea HOM05D004369 ORTHO05D004907 1.5e-29 134.0 254 39.4
Nitab4.5_0000062g0280 Nicotiana tabacum HOM05D004369 ORTHO05D004907 1.9e-29 133.7 245 42.4
Solyc10g077130.1 Solanum lycopersicum HOM05D004369 ORTHO05D004907 2.5e-29 133.3 237 40.9
AL5G38270 Arabidopsis lyrata HOM05D004369 ORTHO05D004907 3.3e-29 132.9 265 38.9
BcaB02g08344 Brassica carinata HOM05D004369 ORTHO05D004907 3.3e-29 132.9 258 42.6
Migut.J01607 Erythranthe guttata HOM05D004369 ORTHO05D004907 3.3e-29 132.9 259 40.9
AL4G38990 Arabidopsis lyrata HOM05D004369 ORTHO05D004907 4.3e-29 132.5 254 40.2
CARHR136130 Cardamine hirsuta HOM05D004369 ORTHO05D004907 4.3e-29 132.5 252 39.3
A04p03590 Brassica napus HOM05D004369 ORTHO05D004907 5.6e-29 132.1 251 42.2
BraA04t16076Z Brassica rapa HOM05D004369 ORTHO05D004907 7.3e-29 131.7 253 42.7
BcaC07g40111 Brassica carinata HOM05D004369 ORTHO05D004907 9.6e-29 131.3 255 40.0
Oeu023004.1 Olea europaea HOM05D004369 ORTHO05D004907 9.6e-29 131.3 252 45.2
AT2G41010 Arabidopsis thaliana HOM05D004369 ORTHO05D004907 1.6e-28 130.6 253 37.9
Sopen10g028810 Solanum pennellii HOM05D004369 ORTHO05D004907 1.6e-28 130.6 237 40.5
Aa31LG10G11730 Aethionema arabicum HOM05D004369 ORTHO05D004907 4.7e-28 129.0 254 42.5
CARHR167030 Cardamine hirsuta HOM05D004369 ORTHO05D004907 4.7e-28 129.0 270 40.0
BcaC02g09876 Brassica carinata HOM05D004369 ORTHO05D004907 6.2e-28 128.6 252 41.3
C04p35650 Brassica napus HOM05D004369 ORTHO05D004907 6.2e-28 128.6 252 41.3
BolC4t25239H Brassica oleracea HOM05D004369 ORTHO05D004907 6.2e-28 128.6 252 41.3
CANSAT80G1482 Cannabis sativa HOM05D004369 ORTHO05D004907 8.1e-28 128.3 239 43.1
THA.LOC104815333 Tarenaya hassleriana HOM05D004369 ORTHO05D004907 8.1e-28 128.3 258 39.9
Carub.0005s2361 Capsella rubella HOM05D004369 ORTHO05D004907 1.8e-27 127.1 270 38.5
EL10Ac3g07333 Beta vulgaris HOM05D004369 ORTHO05D004907 6.9e-27 125.2 272 41.2
Oeu044231.1 Olea europaea HOM05D004369 ORTHO05D004907 6.9e-27 125.2 251 41.0
AUR62018430 Chenopodium quinoa HOM05D004369 ORTHO05D004907 9.0e-27 124.8 266 43.6
Sed0018866 Sechium edule HOM05D004369 ORTHO05D004907 9.0e-27 124.8 243 41.2
AUR62021003 Chenopodium quinoa HOM05D004369 ORTHO05D004907 2.0e-26 123.6 260 43.8
Lsat_1_v5_gn_8_109221 Lactuca sativa HOM05D004369 ORTHO05D004907 2.0e-26 123.6 269 36.8
A04p31330 Brassica napus HOM05D004369 ORTHO05D004907 4.4e-26 122.5 253 39.9
BcaC02g12874 Brassica carinata HOM05D004369 ORTHO05D004907 5.8e-26 122.1 253 39.5
Sp5g05710 Schrenkiella parvula HOM05D004369 ORTHO05D004907 5.8e-26 122.1 257 37.7
C04p68730 Brassica napus HOM05D004369 ORTHO05D004907 7.6e-26 121.7 253 39.5
BolC4t28378H Brassica oleracea HOM05D004369 ORTHO05D004907 7.6e-26 121.7 253 39.5
Thhalv10006505m.g Eutrema salsugineum HOM05D004369 ORTHO05D004907 9.9e-26 121.3 263 39.2
Oeu057811.1 Olea europaea HOM05D004369 ORTHO05D004907 9.9e-26 121.3 243 39.1
Oeu060762.1 Olea europaea HOM05D004369 ORTHO05D004907 8.4e-25 118.2 260 38.8
Oeu034749.1 Olea europaea HOM05D004369 ORTHO05D004907 1.1e-24 117.9 256 40.2
Peaxi162Scf00607g00054 Petunia axillaris HOM05D004369 ORTHO05D004907 1.1e-24 117.9 251 38.6
Peaxi162Scf00003g05315 Petunia axillaris HOM05D004369 ORTHO05D004907 1.4e-24 117.5 248 39.9
Aqoxy2G00033 Aquilegia oxysepala HOM05D004369 ORTHO05D004907 3.2e-24 116.3 279 36.6
Lalb_Chr24g0400611 Lupinus albus HOM05D004369 ORTHO05D004907 5.4e-24 115.5 182 46.2
Oeu034750.1 Olea europaea HOM05D004369 ORTHO05D004907 5.4e-24 115.5 258 39.5
BraA04t18590Z Brassica rapa HOM05D004369 ORTHO05D004907 9.3e-24 114.8 255 38.8
Carub.0004s2334 Capsella rubella HOM05D004369 ORTHO05D004907 2.1e-23 113.6 257 37.0
MSTRG.26187 Avicennia marina HOM05D004369 ORTHO05D004907 2.7e-23 113.2 248 38.7
PGSC0003DMG400028198 Solanum tuberosum HOM05D004369 ORTHO05D004907 6.0e-23 112.1 245 35.9
Gohir.D11G321000 Gossypium hirsutum HOM05D004369 ORTHO05D004907 1.1e-21 107.8 165 46.1
HPP92_012446 Vanilla planifolia HOM05D004369 ORTHO05D004907 1.1e-21 107.8 184 41.8
Gohir.A11G305600 Gossypium hirsutum HOM05D004369 ORTHO05D004907 1.9e-21 107.1 166 45.2
CAN.G959.22 Capsicum annuum HOM05D004369 ORTHO05D004907 2.5e-21 106.7 177 44.1
Gorai.007G351200 Gossypium raimondii HOM05D004369 ORTHO05D004907 2.5e-21 106.7 165 45.5
Migut.K00167 Erythranthe guttata HOM05D004369 ORTHO05D004907 7.3e-21 105.1 255 36.5
DCAR_020610 Daucus carota HOM05D004369 ORTHO05D004907 1.3e-20 104.4 191 42.4
CDE09G1065 Ceratophyllum demersum HOM05D004369 ORTHO05D004907 1.8e-19 100.5 227 37.9
SGA_v2.0_scaffold66G22309 Striga asiatica HOM05D004369 ORTHO05D004907 2.4e-19 100.1 260 35.0
SalBow1G6186 Salvia bowleyana HOM05D004369 ORTHO05D004907 1.2e-18 97.8 261 35.2
Sopen10g031550 Solanum pennellii HOM05D004369 ORTHO05D004907 1.2e-18 97.8 248 34.7
Sc25g0005580 Simmondsia chinensis HOM05D004369 ORTHO05D004907 1.5e-18 97.4 153 45.8
SGA_v2.0_scaffold106G30551 Striga asiatica HOM05D004369 ORTHO05D004907 2.0e-18 97.1 238 36.1
ECA236G2438 Erigeron canadensis HOM05D004369 ORTHO05D004907 5.8e-18 95.5 153 48.4
PSO339G3328 Papaver somniferum HOM05D004369 ORTHO05D004907 5.8e-18 95.5 181 39.2
PSO384G0208 Papaver somniferum HOM05D004369 ORTHO05D004907 1.7e-17 94.0 178 39.9
HanXRQChr09g0258571 Helianthus annuus HOM05D004369 ORTHO05D004907 2.9e-17 93.2 172 40.7
Eucgr.A02182 Eucalyptus grandis HOM05D004369 ORTHO05D004907 2.4e-16 90.1 149 46.3
HanXRQChr03g0086901 Helianthus annuus HOM05D004369 ORTHO05D004907 9.3e-16 88.2 251 38.6
SGA_v2.0_scaffold69G23192 Striga asiatica HOM05D004369 ORTHO05D004907 2.7e-15 86.7 253 34.0
MSTRG.10776 Avicennia marina HOM05D004369 ORTHO05D004907 6.0e-15 85.5 247 36.0
HPP92_014347 Vanilla planifolia HOM05D004369 ORTHO05D004907 2.5e-13 80.1 181 38.1
SHI12275 Sapria himalayana HOM05D004369 ORTHO05D004907 1.1e-11 74.7 89 50.6
CAN.G128.96 Capsicum annuum HOM05D004369 ORTHO05D004907 6.9e-11 72.0 100 50.0
unitig_21.g20674 Utricularia gibba HOM05D004369 ORTHO05D004907 1.5e-10 70.9 174 35.6
Zm00001eb128970 Zea mays HOM05D004369 ORTHO05D004907 1.5e-10 70.9 165 36.4
ATR1096G063 Amborella trichopoda HOM05D004369 ORTHO05D004907 3.4e-10 69.7 256 29.3
HPP92_028709 Vanilla planifolia HOM05D004369 ORTHO05D004907 3.4e-10 69.7 89 51.7
CDE08G1070 Ceratophyllum demersum HOM05D004369 ORTHO05D004907 2.2e-09 67.0 141 39.7
Os01g0278000 Oryza sativa ssp. japonica HOM05D004369 ORTHO05D004907 6.4e-09 65.5 83 45.8
SEGI_18240 Sequoiadendron giganteum HOM05D004369 ORTHO05D004907 8.4e-09 65.1 94 42.6
Os11g0131100 Oryza sativa ssp. japonica HOM05D004369 ORTHO05D004907 3.2e-08 63.2 159 34.6
CDE02G4522 Ceratophyllum demersum HOM05D004369 ORTHO05D004907 1.2e-07 61.2 181 34.3
CDE04G0994 Ceratophyllum demersum HOM05D004369 ORTHO05D004907 3.5e-07 59.7 172 33.7
Phvul.006G002700 Phaseolus vulgaris HOM05D001711 ORTHO05D002847 6.7e-06 55.5 135 34.8


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