Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p013345 Quercus lobata HOM05D000519 ORTHO05D001210 1.4e-60 236.1 119 100.0
QL07p013373 Quercus lobata HOM05D000519 ORTHO05D001210 1.5e-43 179.5 93 97.8
Cfa019958 Carpinus fangiana HOM05D000519 ORTHO05D001210 5.6e-38 161.0 93 86.0
Haze_20276 Corylus avellana HOM05D000519 ORTHO05D001210 2.1e-37 159.1 93 84.9
Haze_20281 Corylus avellana HOM05D000519 ORTHO05D001210 2.1e-37 159.1 93 84.9
CiPaw.09G051400 Carya illinoinensis HOM05D000519 ORTHO05D001210 4.2e-33 144.8 93 77.4
TAR633G0145 Trochodendron aralioides HOM05D000519 ORTHO05D001210 1.0e-31 140.2 93 71.0
TWI53G0432 Tripterygium wilfordii HOM05D000519 ORTHO05D001210 1.8e-31 139.4 85 81.2
CSS0046647 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D001210 1.1e-30 136.7 93 71.0
Os01g0270100 Oryza sativa ssp. japonica HOM05D000519 ORTHO05D001210 1.5e-30 136.3 117 58.1
Glyma.13G189500 Glycine max HOM05D000519 ORTHO05D001210 1.3e-29 133.3 93 68.8
Glyma.15G227500 Glycine max HOM05D000519 ORTHO05D001210 1.3e-29 133.3 93 68.8
Ca_24028_v3 Cicer arietinum L. HOM05D000519 ORTHO05D001210 2.1e-29 132.5 93 69.9
Prupe.2G047100 Prunus persica HOM05D000519 ORTHO05D001210 3.7e-29 131.7 94 69.1
TAR636G0712 Trochodendron aralioides HOM05D000519 ORTHO05D001210 3.7e-29 131.7 93 68.8
LjContig00430g0007944 Lotus japonicus HOM05D000519 ORTHO05D001210 4.8e-29 131.3 93 68.8
Sabra16G0034200 Salix brachista HOM05D000519 ORTHO05D001210 4.8e-29 131.3 89 73.0
MD07G1043000 Malus domestica HOM05D000519 ORTHO05D001210 6.2e-29 131.0 94 66.0
RcHm_v2.0_Chr3g0494971 Rosa chinensis HOM05D000519 ORTHO05D001210 1.1e-28 130.2 91 70.3
arahy.Tifrunner.gnm1.ann1.MLA72C Arachis hypogaea HOM05D000519 ORTHO05D001210 1.8e-28 129.4 93 68.8
arahy.Tifrunner.gnm1.ann1.ZL1DA1 Arachis hypogaea HOM05D000519 ORTHO05D001210 1.8e-28 129.4 93 68.8
Nn7g36993 Nelumbo nucifera HOM05D000519 ORTHO05D001210 1.8e-28 129.4 93 69.9
MD02G1275000 Malus domestica HOM05D000519 ORTHO05D001210 4.1e-28 128.3 94 64.9
Sed0025076 Sechium edule HOM05D000519 ORTHO05D001210 4.1e-28 128.3 96 64.6
CiPaw.14G010700 Carya illinoinensis HOM05D000519 ORTHO05D001210 5.3e-28 127.9 91 69.2
Aqoxy1G00058 Aquilegia oxysepala HOM05D000519 ORTHO05D001210 6.9e-28 127.5 93 64.5
Lalb_Chr19g0132871 Lupinus albus HOM05D000519 ORTHO05D001210 1.2e-27 126.7 92 67.4
Atru.chr12.1206 Acer truncatum HOM05D000519 ORTHO05D001210 1.5e-27 126.3 95 64.2
Medtr8g041410 Medicago truncatula HOM05D000519 ORTHO05D001210 1.5e-27 126.3 93 66.7
ClCG11G013050 Citrullus lanatus HOM05D000519 ORTHO05D001210 2.6e-27 125.6 94 66.0
RcHm_v2.0_Chr1g0328231 Rosa chinensis HOM05D000519 ORTHO05D001210 2.6e-27 125.6 94 67.0
Psat4g143880 Pisum sativum HOM05D000519 ORTHO05D001210 3.4e-27 125.2 117 58.1
VMungo1127G0633 Vigna mungo HOM05D000519 ORTHO05D001210 3.4e-27 125.2 93 65.6
MBI19_g39142_MAGBIO Magnolia biondii HOM05D000519 ORTHO05D001210 4.5e-27 124.8 90 68.9
ATR0307G050 Amborella trichopoda HOM05D000519 ORTHO05D001210 1.7e-26 122.9 92 63.0
CiPaw.13G017000 Carya illinoinensis HOM05D000519 ORTHO05D001210 1.7e-26 122.9 94 67.0
CDE08G1526 Ceratophyllum demersum HOM05D000519 ORTHO05D001210 1.7e-26 122.9 92 62.0
CsaV3_5G029540 Cucumis sativus L. HOM05D000519 ORTHO05D001210 2.2e-26 122.5 94 64.9
Phvul.011G196600 Phaseolus vulgaris HOM05D000519 ORTHO05D001210 2.2e-26 122.5 93 62.4
arahy.Tifrunner.gnm1.ann1.PELT1K Arachis hypogaea HOM05D000519 ORTHO05D001210 2.9e-26 122.1 107 55.1
CSS0008725 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D001210 2.9e-26 122.1 93 64.5
Thecc.05G122600 Theobroma cacao HOM05D000519 ORTHO05D001210 2.9e-26 122.1 86 69.8
GSVIVG01025801001 Vitis vinifera HOM05D000519 ORTHO05D001210 3.8e-26 121.7 92 67.4
Cfa010968 Carpinus fangiana HOM05D000519 ORTHO05D001210 5.0e-26 121.3 93 62.4
Nn2g14598 Nelumbo nucifera HOM05D000519 ORTHO05D001210 5.0e-26 121.3 93 64.5
Rhsim04G0117000 Rhododendron simsii HOM05D000519 ORTHO05D001210 5.0e-26 121.3 93 64.5
Lalb_Chr03g0032601 Lupinus albus HOM05D000519 ORTHO05D001210 6.5e-26 120.9 92 65.2
Oeu028986.1 Olea europaea HOM05D000519 ORTHO05D001210 6.5e-26 120.9 116 54.3
QL04p021809 Quercus lobata HOM05D000519 ORTHO05D001210 6.5e-26 120.9 93 64.5
Actinidia18375 Actinidia chinensis HOM05D000519 ORTHO05D001210 1.1e-25 120.2 93 64.5
Haze_02970 Corylus avellana HOM05D000519 ORTHO05D001210 1.9e-25 119.4 93 62.4
Duzib128G1701 Durio zibethinus HOM05D000519 ORTHO05D001210 1.9e-25 119.4 78 76.9
FvH4_7g04140 Fragaria vesca HOM05D000519 ORTHO05D001210 1.9e-25 119.4 93 62.4
TWI63G1775 Tripterygium wilfordii HOM05D000519 ORTHO05D001210 1.9e-25 119.4 94 62.8
CANSAT56G1130 Cannabis sativa HOM05D000519 ORTHO05D001210 2.5e-25 119.0 93 62.4
CANSAT56G1974 Cannabis sativa HOM05D000519 ORTHO05D001210 2.5e-25 119.0 93 62.4
Dinv02125 Davidia involucrata HOM05D000519 ORTHO05D001210 2.5e-25 119.0 93 65.6
Lj1g0013483 Lotus japonicus HOM05D000519 ORTHO05D001210 2.5e-25 119.0 93 64.5
Dinv31994 Davidia involucrata HOM05D000519 ORTHO05D001210 3.2e-25 118.6 93 64.5
vmacro13804 Vaccinium macrocarpon HOM05D000519 ORTHO05D001210 3.2e-25 118.6 93 63.4
CSS0039548 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D001210 4.2e-25 118.2 93 62.4
FAN03G2892 Fragaria x ananassa HOM05D000519 ORTHO05D001210 4.2e-25 118.2 93 61.3
Psat3g081960 Pisum sativum HOM05D000519 ORTHO05D001210 4.2e-25 118.2 93 60.2
Thecc.10G138800 Theobroma cacao HOM05D000519 ORTHO05D001210 4.2e-25 118.2 92 63.0
arahy.Tifrunner.gnm1.ann1.QSG82C Arachis hypogaea HOM05D000519 ORTHO05D001210 5.5e-25 117.9 91 62.6
CDE02G2182 Ceratophyllum demersum HOM05D000519 ORTHO05D001210 5.5e-25 117.9 92 58.7
FAN01G0617 Fragaria x ananassa HOM05D000519 ORTHO05D001210 5.5e-25 117.9 93 61.3
PSO339G0227 Papaver somniferum HOM05D000519 ORTHO05D001210 5.5e-25 117.9 93 64.5
PSO384G4053 Papaver somniferum HOM05D000519 ORTHO05D001210 5.5e-25 117.9 93 64.5
Manes.04G155400 Manihot esculenta HOM05D000519 ORTHO05D001210 7.2e-25 117.5 89 61.8
TWI38G1437 Tripterygium wilfordii HOM05D000519 ORTHO05D001210 7.2e-25 117.5 94 60.6
Duzib106G2054 Durio zibethinus HOM05D000519 ORTHO05D001210 1.2e-24 116.7 92 60.9
Hma1.2p1_0233F.1_g098160 Hydrangea macrophylla HOM05D000519 ORTHO05D001210 1.2e-24 116.7 93 62.4
FAN10G1451 Fragaria x ananassa HOM05D000519 ORTHO05D001210 1.6e-24 116.3 93 61.3
THA.LOC104799337 Tarenaya hassleriana HOM05D000519 ORTHO05D001210 1.6e-24 116.3 93 61.3
GSVIVG01036582001 Vitis vinifera HOM05D000009 ORTHO05D000008 1.6e-24 116.3 93 58.1
Ciclev10002346m.g Citrus clementina HOM05D000519 ORTHO05D001210 2.1e-24 115.9 91 63.7
Rhsim07G0073300 Rhododendron simsii HOM05D000519 ORTHO05D001210 2.1e-24 115.9 93 62.4
FAN06G2804 Fragaria x ananassa HOM05D000519 ORTHO05D001210 2.7e-24 115.5 93 60.2
COL.COLO4_21327 Corchorus olitorius HOM05D000519 ORTHO05D001210 3.5e-24 115.2 92 62.0
PGR044G0162 Punica granatum HOM05D000519 ORTHO05D001210 4.6e-24 114.8 88 64.8
Eucgr.J00085 Eucalyptus grandis HOM05D000519 ORTHO05D001210 6.1e-24 114.4 94 61.7
Potri.003G192200 Populus trichocarpa HOM05D000519 ORTHO05D001210 1.0e-23 113.6 114 53.5
HPP92_012548 Vanilla planifolia HOM05D000519 ORTHO05D001210 1.0e-23 113.6 106 54.7
THA.LOC104826741 Tarenaya hassleriana HOM05D000519 ORTHO05D001210 1.3e-23 113.2 93 59.1
Gohir.A10G190300 Gossypium hirsutum HOM05D000519 ORTHO05D001210 2.3e-23 112.5 117 52.1
PGR042G2892 Punica granatum HOM05D000519 ORTHO05D001210 2.3e-23 112.5 87 62.1
EL10Ac2g02716 Beta vulgaris HOM05D000519 ORTHO05D001210 3.0e-23 112.1 87 65.5
Hund13411 Selenicereus undatus HOM05D000519 ORTHO05D001210 8.7e-23 110.5 87 63.2
Atru.chr1.1350 Acer truncatum HOM05D000519 ORTHO05D001210 1.9e-22 109.4 81 70.4
SalBow1G7707 Salvia bowleyana HOM05D000519 ORTHO05D001210 1.9e-22 109.4 90 58.9
Sp3g10620 Schrenkiella parvula HOM05D000519 ORTHO05D001210 3.3e-22 108.6 93 60.2
Duzib114G0410 Durio zibethinus HOM05D000519 ORTHO05D001210 4.3e-22 108.2 92 56.5
C05p55420 Brassica napus HOM05D000519 ORTHO05D001210 5.7e-22 107.8 93 60.2
Potri.001G032900 Populus trichocarpa HOM05D000519 ORTHO05D001210 5.7e-22 107.8 89 59.6
Ah.10g029850 Amaranthus hybridus HOM05D000519 ORTHO05D001210 7.4e-22 107.5 89 59.6
A05p36980 Brassica napus HOM05D000519 ORTHO05D001210 7.4e-22 107.5 93 59.1
AUR62032567 Chenopodium quinoa HOM05D000519 ORTHO05D001210 7.4e-22 107.5 87 62.1
Migut.H00005 Erythranthe guttata HOM05D000519 ORTHO05D001210 7.4e-22 107.5 90 61.1
MSTRG.26921 Avicennia marina HOM05D000519 ORTHO05D001210 9.7e-22 107.1 89 59.6
BolC5t34208H Brassica oleracea HOM05D000519 ORTHO05D001210 9.7e-22 107.1 93 59.1
Ciclev10012693m.g Citrus clementina HOM05D000519 ORTHO05D001210 9.7e-22 107.1 86 67.4
Thhalv10021442m.g Eutrema salsugineum HOM05D000519 ORTHO05D001210 1.3e-21 106.7 91 60.4
AL3G24120 Arabidopsis lyrata HOM05D000519 ORTHO05D001210 1.6e-21 106.3 91 58.2
AT3G12490 Arabidopsis thaliana HOM05D000519 ORTHO05D001210 2.2e-21 105.9 93 59.1
AUR62031684 Chenopodium quinoa HOM05D000519 ORTHO05D001210 2.2e-21 105.9 87 60.9
CARHR086990 Cardamine hirsuta HOM05D000519 ORTHO05D001210 3.7e-21 105.1 91 60.4
Gohir.D10G198100 Gossypium hirsutum HOM05D000519 ORTHO05D001210 3.7e-21 105.1 92 57.6
Lj7A492G19 Lonicera japonica HOM05D000519 ORTHO05D001210 3.7e-21 105.1 94 58.5
Sabra01G0023500 Salix brachista HOM05D000519 ORTHO05D001210 4.8e-21 104.8 92 56.5
Sc13g0000890 Simmondsia chinensis HOM05D000519 ORTHO05D001210 4.8e-21 104.8 88 59.1
THA.LOC104816684 Tarenaya hassleriana HOM05D000519 ORTHO05D001210 4.8e-21 104.8 105 54.3
Aa31LG11G5980 Aethionema arabicum HOM05D000519 ORTHO05D001210 6.3e-21 104.4 78 64.1
A03p02150 Brassica napus HOM05D000519 ORTHO05D001210 6.3e-21 104.4 78 65.4
DCAR_031840 Daucus carota HOM05D000519 ORTHO05D001210 6.3e-21 104.4 87 58.6
CARHR208160 Cardamine hirsuta HOM05D000519 ORTHO05D001210 8.2e-21 104.0 83 62.7
C03p02460 Brassica napus HOM05D000519 ORTHO05D001210 1.8e-20 102.8 78 64.1
BolC3t12797H Brassica oleracea HOM05D000519 ORTHO05D001210 1.8e-20 102.8 78 64.1
Ca_08704_v3 Cicer arietinum L. HOM05D000519 ORTHO05D001210 1.8e-20 102.8 91 56.0
Gorai.011G221800 Gossypium raimondii HOM05D000519 ORTHO05D001210 1.8e-20 102.8 90 57.8
PSO063G7240 Papaver somniferum HOM05D000519 ORTHO05D001210 1.8e-20 102.8 85 57.6
Sc11g0006180 Simmondsia chinensis HOM05D000519 ORTHO05D001210 1.8e-20 102.8 88 58.0
Aa31sc1276G20 Aethionema arabicum HOM05D000519 ORTHO05D001210 2.4e-20 102.4 91 57.1
Carub.0006s0404 Capsella rubella HOM05D000519 ORTHO05D001210 3.1e-20 102.1 83 60.2
SGA_v2.0_scaffold18G08212 Striga asiatica HOM05D000519 ORTHO05D001210 4.1e-20 101.7 85 58.8
BcaB04g21075 Brassica carinata HOM05D000519 ORTHO05D001210 5.3e-20 101.3 88 59.1
BNapus_Darmor_BZH_scaffold_149p00020 Brassica napus HOM05D000519 ORTHO05D001210 5.3e-20 101.3 88 59.1
BraA03t09579Z Brassica rapa HOM05D000519 ORTHO05D001210 5.3e-20 101.3 76 64.5
BcaB06g25535 Brassica carinata HOM05D000519 ORTHO05D001210 1.2e-19 100.1 88 58.0
BcaC09g48245 Brassica carinata HOM05D000519 ORTHO05D001210 1.2e-19 100.1 88 58.0
C01p52750 Brassica napus HOM05D000519 ORTHO05D001210 1.2e-19 100.1 88 58.0
BolC1t05212H Brassica oleracea HOM05D000519 ORTHO05D001210 1.2e-19 100.1 88 58.0
BraA01t04133Z Brassica rapa HOM05D000519 ORTHO05D001210 1.2e-19 100.1 88 58.0
unitig_749.g14102 Utricularia gibba HOM05D000519 ORTHO05D001210 1.2e-19 100.1 88 54.5
BcaC05g29262 Brassica carinata HOM05D000519 ORTHO05D001210 2.0e-19 99.4 87 58.6
vmacro08982 Vaccinium macrocarpon HOM05D000519 ORTHO05D001210 2.6e-19 99.0 75 65.3
Gorai.010G215400 Gossypium raimondii HOM05D000519 ORTHO05D001210 5.9e-19 97.8 93 53.8
DCAR_031842 Daucus carota HOM05D000519 ORTHO05D001210 7.7e-19 97.4 89 52.8
Gohir.A06G173900 Gossypium hirsutum HOM05D000519 ORTHO05D001210 1.0e-18 97.1 93 53.8
Peaxi162Scf00516g00518 Petunia axillaris HOM05D000519 ORTHO05D001210 1.0e-18 97.1 89 55.1
HanXRQChr13g0424331 Helianthus annuus HOM05D000519 ORTHO05D001210 1.3e-18 96.7 93 53.8
Carub.0003s1182 Capsella rubella HOM05D000519 ORTHO05D001210 1.7e-18 96.3 91 57.1
AT5G05110 Arabidopsis thaliana HOM05D000519 ORTHO05D001210 2.2e-18 95.9 78 59.0
ECA236G4990 Erigeron canadensis HOM05D000519 ORTHO05D001210 8.5e-18 94.0 93 49.5
Sabra03G0143100 Salix brachista HOM05D000519 ORTHO05D001210 1.1e-17 93.6 72 61.1
SEGI_04265 Sequoiadendron giganteum HOM05D000519 ORTHO05D001210 1.1e-17 93.6 77 55.8
Nitab4.5_0000021g0820 Nicotiana tabacum HOM05D000519 ORTHO05D001210 1.4e-17 93.2 90 55.6
Cpa.g.sc228.9 Carica papaya HOM05D000519 ORTHO05D001210 1.9e-17 92.8 129 44.2
Nitab4.5_0009278g0010 Nicotiana tabacum HOM05D000519 ORTHO05D001210 1.9e-17 92.8 90 54.4
PGSC0003DMG400026473 Solanum tuberosum HOM05D000519 ORTHO05D001210 7.2e-17 90.9 88 51.1
HanXRQChr04g0119231 Helianthus annuus HOM05D000519 ORTHO05D001210 9.4e-17 90.5 91 50.5
Manes.11G008702 Manihot esculenta HOM05D000519 ORTHO05D001210 3.6e-16 88.6 89 55.1
Sopen03g028040 Solanum pennellii HOM05D000519 ORTHO05D001210 3.6e-16 88.6 88 50.0
Solyc03g097270.3 Solanum lycopersicum HOM05D000519 ORTHO05D001210 6.1e-16 87.8 88 48.9
PSO782G1091 Papaver somniferum HOM05D000519 ORTHO05D001210 7.9e-16 87.4 92 48.9
AL6G14920 Arabidopsis lyrata HOM05D000519 ORTHO05D001210 2.3e-15 85.9 77 55.8
Lsat_1_v5_gn_7_31141 Lactuca sativa HOM05D000519 ORTHO05D001210 5.7e-14 81.3 79 49.4
CAN.G732.36 Capsicum annuum HOM05D005257 ORTHO05D006425 1.7e-13 79.7 72 54.2
TPR.G23182 Trifolium pratense HOM05D000519 ORTHO05D001210 2.2e-13 79.3 86 46.5
Gohir.D06G184000 Gossypium hirsutum HOM05D000519 ORTHO05D001210 4.8e-13 78.2 68 55.9
CSS0026186 Camellia sinensis var. sinensis HOM05D000519 ORTHO05D001210 1.4e-12 76.6 67 55.2
Mapoly0003s0166 Marchantia polymorpha HOM05D000519 ORTHO05D001210 4.1e-12 75.1 81 42.0
RcHm_v2.0_Chr1g0326371 Rosa chinensis HOM05D000519 ORTHO05D001210 5.3e-12 74.7 78 50.0
Pp3c15_24170 Physcomitrium patens HOM05D000519 ORTHO05D001210 1.5e-11 73.2 75 48.0
Pp3c15_24180 Physcomitrium patens HOM05D000519 ORTHO05D001210 1.5e-11 73.2 75 48.0
Pp3c8_17580 Physcomitrium patens HOM05D000519 ORTHO05D001210 1.5e-11 73.2 79 49.4
Pp3c9_24080 Physcomitrium patens HOM05D000519 ORTHO05D001210 1.0e-10 70.5 77 46.8
MELO3C011798.2 Cucumis melo HOM05D000519 ORTHO05D001210 1.3e-10 70.1 50 64.0
SEGI_10020 Sequoiadendron giganteum HOM05D000519 ORTHO05D001210 3.8e-10 68.6 79 41.8
Zm00001eb333010 Zea mays HOM05D000519 ORTHO05D001210 2.0e-06 56.2 32 75.0


User provided reference genes

Program Settings