Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p011387 Quercus lobata HOM05D003269 ORTHO05D003672 1.1e-107 393.3 197 100.0
QL07p012148 Quercus lobata HOM05D003269 ORTHO05D003672 1.0e-15 87.8 164 42.1
QL07p012167 Quercus lobata HOM05D003269 ORTHO05D003672 1.0e-12 77.8 77 57.1
Cpa.g.sc50.62 Carica papaya HOM05D003269 ORTHO05D003672 4.8e-10 68.9 92 44.6
Potri.012G059000 Populus trichocarpa HOM05D003269 ORTHO05D003672 8.2e-10 68.2 92 44.6
VMungo0540G0900 Vigna mungo HOM05D003269 ORTHO05D003672 7.0e-09 65.1 92 45.7
GSVIVG01020789001 Vitis vinifera HOM05D003269 ORTHO05D003672 9.1e-09 64.7 90 43.3
Phvul.006G036100 Phaseolus vulgaris HOM05D003269 ORTHO05D003672 1.6e-08 63.9 92 43.5
Thecc.01G158000 Theobroma cacao HOM05D003269 ORTHO05D003672 1.6e-08 63.9 92 42.4
Sabra12G0041000 Salix brachista HOM05D003269 ORTHO05D003672 2.0e-08 63.5 85 44.7
ATR0564G272 Amborella trichopoda HOM05D003269 ORTHO05D003672 5.9e-08 62.0 92 39.1
arahy.Tifrunner.gnm1.ann1.7T7KVP Arachis hypogaea HOM05D003269 ORTHO05D003672 5.9e-08 62.0 90 43.3
Ca_14631_v3 Cicer arietinum L. HOM05D003269 ORTHO05D003672 5.9e-08 62.0 90 44.4
Duzib147G0193 Durio zibethinus HOM05D003269 ORTHO05D003672 1.0e-07 61.2 92 41.3
CANSAT64G0322 Cannabis sativa HOM05D003269 ORTHO05D003672 1.3e-07 60.8 59 50.8
Lj6g0018418 Lotus japonicus HOM05D001206 ORTHO05D005935 1.7e-07 60.5 92 43.5
arahy.Tifrunner.gnm1.ann1.0N5IZC Arachis hypogaea HOM05D003269 ORTHO05D003672 2.2e-07 60.1 90 42.2
Glyma.08G311300 Glycine max HOM05D003269 ORTHO05D003672 2.2e-07 60.1 92 41.3
Lsat_1_v5_gn_8_31860 Lactuca sativa HOM05D003269 ORTHO05D003672 2.2e-07 60.1 58 51.7
Nn6g34433 Nelumbo nucifera HOM05D003269 ORTHO05D003672 2.9e-07 59.7 92 40.2
PGR142G0623 Punica granatum HOM05D003269 ORTHO05D003672 2.9e-07 59.7 92 40.2
RcHm_v2.0_Chr2g0150641 Rosa chinensis HOM05D003269 ORTHO05D003672 2.9e-07 59.7 92 38.0
Gohir.A09G003900 Gossypium hirsutum HOM05D003269 ORTHO05D003672 3.8e-07 59.3 63 49.2
Gohir.D09G003500 Gossypium hirsutum HOM05D003269 ORTHO05D003672 3.8e-07 59.3 63 49.2
Gorai.006G004800 Gossypium raimondii HOM05D003269 ORTHO05D003672 3.8e-07 59.3 63 49.2
HanXRQChr12g0367501 Helianthus annuus HOM05D003269 ORTHO05D003672 5.0e-07 58.9 57 52.6
QL12p023408 Quercus lobata HOM05D003269 ORTHO05D003672 5.0e-07 58.9 78 43.6
Actinidia11179 Actinidia chinensis HOM05D003269 ORTHO05D003672 6.5e-07 58.5 57 50.9
Psat5g193080 Pisum sativum HOM05D003269 ORTHO05D003672 6.5e-07 58.5 89 42.7
Lj3A1010G57 Lonicera japonica HOM05D003269 ORTHO05D003672 8.5e-07 58.2 57 52.6
Duzib147G1668 Durio zibethinus HOM05D003269 ORTHO05D003672 1.1e-06 57.8 54 53.7
Prupe.3G169700 Prunus persica HOM05D003269 ORTHO05D003672 1.1e-06 57.8 92 38.0
MSTRG.14301 Avicennia marina HOM05D003269 ORTHO05D003672 1.5e-06 57.4 102 38.2
Hma1.2p1_3358F.1_g335570 Hydrangea macrophylla HOM05D003269 ORTHO05D003672 1.5e-06 57.4 92 40.2
Lalb_Chr15g0080841 Lupinus albus HOM05D003269 ORTHO05D003672 1.5e-06 57.4 90 38.9
TAR629G3156 Trochodendron aralioides HOM05D003269 ORTHO05D003672 1.5e-06 57.4 92 40.2
CSS0013112 Camellia sinensis var. sinensis HOM05D003269 ORTHO05D003672 1.9e-06 57.0 57 49.1
FvH4_6g37640 Fragaria vesca HOM05D003269 ORTHO05D003672 1.9e-06 57.0 92 37.0
FAN02G0831 Fragaria x ananassa HOM05D001206 ORTHO05D005935 1.9e-06 57.0 92 37.0
FAN05G2200 Fragaria x ananassa HOM05D003269 ORTHO05D003672 1.9e-06 57.0 92 37.0
FAN14G0221 Fragaria x ananassa HOM05D003269 ORTHO05D003672 1.9e-06 57.0 92 37.0
Atru.chr6.3560 Acer truncatum HOM05D003269 ORTHO05D003672 2.5e-06 56.6 57 47.4
Duzib147G1453 Durio zibethinus HOM05D003269 ORTHO05D003672 3.2e-06 56.2 92 40.2
Phvul.006G036188 Phaseolus vulgaris HOM05D003269 ORTHO05D003672 3.2e-06 56.2 58 50.0
Sed0023934 Sechium edule HOM05D003269 ORTHO05D003672 3.2e-06 56.2 90 38.9
MELO3C019712.2 Cucumis melo HOM05D003269 ORTHO05D003672 5.5e-06 55.5 92 38.0
CsaV3_6G015620 Cucumis sativus L. HOM05D003269 ORTHO05D003672 5.5e-06 55.5 92 38.0
MBI05_g35448_MAGBIO Magnolia biondii HOM05D003269 ORTHO05D003672 5.5e-06 55.5 92 38.0
Rhsim06G0124100 Rhododendron simsii HOM05D003269 ORTHO05D003672 5.5e-06 55.5 91 37.4
Dinv06273 Davidia involucrata HOM05D003269 ORTHO05D003672 7.2e-06 55.1 57 47.4
Medtr8g007210 Medicago truncatula HOM05D003269 ORTHO05D003672 7.2e-06 55.1 92 35.9
Phvul.006G036144 Phaseolus vulgaris HOM05D003269 ORTHO05D003672 9.4e-06 54.7 83 42.2


User provided reference genes

Program Settings