Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p010661 Quercus lobata HOM05D011274 ORTHO05D012136 5.9e-238 827.4 502 100.0
QL07p010851 Quercus lobata HOM05D011274 ORTHO05D012136 3.3e-172 609.0 319 92.8
QL07p010955 Quercus lobata HOM05D011274 ORTHO05D012136 9.7e-124 448.0 275 81.5
QL10p018154 Quercus lobata HOM05D011274 ORTHO05D012136 6.9e-69 265.8 325 48.3
QL08p063661 Quercus lobata HOM05D011274 ORTHO05D012136 7.6e-52 209.1 290 42.8
QL08p063692 Quercus lobata HOM05D011274 ORTHO05D012136 2.5e-50 204.1 298 41.6
QL08p063682 Quercus lobata HOM05D011274 ORTHO05D012136 9.3e-50 202.2 290 41.7
QL08p064279 Quercus lobata HOM05D011274 ORTHO05D012136 4.9e-43 179.9 286 42.0
QL12p011282 Quercus lobata HOM05D011274 ORTHO05D012136 1.7e-35 154.8 282 36.5
QL08p064561 Quercus lobata HOM05D011274 ORTHO05D012136 2.2e-35 154.5 292 35.3
QL08p045355 Quercus lobata HOM05D011274 ORTHO05D012136 8.5e-35 152.5 300 36.3
QL09p043370 Quercus lobata HOM05D000095 ORTHO05D018095 5.0e-27 126.7 119 63.9
QL07p010866 Quercus lobata HOM05D011274 ORTHO05D012136 1.8e-24 118.2 66 77.3
vmacro10955 Vaccinium macrocarpon HOM05D011274 ORTHO05D012136 8.2e-22 109.4 305 29.2
QL08p016266 Quercus lobata HOM05D011274 ORTHO05D012136 2.4e-21 107.8 127 49.6
Ah.09g227600 Amaranthus hybridus HOM05D037678 ORTHO05D012136 1.5e-20 105.1 249 28.9
Rhsim06G0012900 Rhododendron simsii HOM05D011274 ORTHO05D012136 2.6e-20 104.4 231 31.2
AUR62032965 Chenopodium quinoa HOM05D037678 ORTHO05D012136 1.7e-19 101.7 249 29.7
Ah.03g147960 Amaranthus hybridus HOM05D037678 ORTHO05D012136 2.9e-19 100.9 206 32.5
Rhsim06G0014500 Rhododendron simsii HOM05D000059 ORTHO05D012136 3.2e-18 97.4 226 31.0
QL12p032345 Quercus lobata HOM05D002625 ORTHO05D002977 3.7e-14 84.0 73 64.4
vmacro12005 Vaccinium macrocarpon HOM05D019272 ORTHO05D020252 1.1e-13 82.4 256 26.6
QL08p015662 Quercus lobata HOM05D011274 ORTHO05D012136 5.3e-13 80.1 122 40.2
Ah.04g152570 Amaranthus hybridus HOM05D014492 ORTHO05D015818 9.1e-13 79.3 242 26.0
AUR62010229 Chenopodium quinoa HOM05D014492 ORTHO05D015818 1.6e-12 78.6 218 28.9
AUR62010232 Chenopodium quinoa HOM05D014492 ORTHO05D015818 4.5e-12 77.0 218 27.5
CSS0000622 Camellia sinensis var. sinensis HOM05D019272 ORTHO05D020252 5.9e-12 76.6 256 25.4
AUR62010225 Chenopodium quinoa HOM05D014492 ORTHO05D015818 7.7e-12 76.3 218 28.4
Ah.04g152630 Amaranthus hybridus HOM05D014492 ORTHO05D015818 2.9e-11 74.3 242 25.6
AUR62034484 Chenopodium quinoa HOM05D014492 ORTHO05D015818 3.8e-11 73.9 240 26.2
COL.COLO4_16993 Corchorus olitorius HOM05D017991 ORTHO05D020493 8.5e-11 72.8 236 28.4
CSS0029958 Camellia sinensis var. sinensis HOM05D019272 ORTHO05D020252 1.5e-10 72.0 253 24.9
COL.COLO4_16992 Corchorus olitorius HOM05D017991 ORTHO05D020493 1.9e-10 71.6 242 28.1
Ah.04g152650 Amaranthus hybridus HOM05D014492 ORTHO05D015818 5.5e-10 70.1 222 26.1
AUR62016891 Chenopodium quinoa HOM05D038025 ORTHO05D012136 1.6e-09 68.6 136 28.7
DCAR_030117 Daucus carota HOM05D022150 ORTHO05D029191 6.1e-09 66.6 180 27.8
Aqoxy2G03423 Aquilegia oxysepala HOM05D011324 ORTHO05D013448 1.0e-08 65.9 210 26.7
AUR62016894 Chenopodium quinoa HOM05D038025 ORTHO05D012136 3.0e-08 64.3 136 29.4
AUR62039049 Chenopodium quinoa HOM05D038025 ORTHO05D012136 3.0e-08 64.3 136 29.4
QL11p045102 Quercus lobata HOM05D010066 ORTHO05D009743 5.2e-08 63.5 126 24.6
DCAR_022268 Daucus carota HOM05D022150 ORTHO05D029191 9.7e-07 59.3 133 30.8
CSS0027353 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 1.3e-06 58.9 177 28.8
COL.COLO4_24092 Corchorus olitorius HOM05D014846 ORTHO05D016249 3.7e-06 57.4 184 24.5


User provided reference genes

Program Settings