Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p010346 Quercus lobata HOM05D007488 ORTHO05D009461 6.4e-82 307.4 157 100.0
Cfa003623 Carpinus fangiana HOM05D007488 ORTHO05D009461 3.6e-48 195.3 160 64.4
Haze_15889 Corylus avellana HOM05D007488 ORTHO05D009461 1.5e-46 189.9 161 61.5
Rhsim03G0039700 Rhododendron simsii HOM05D007488 ORTHO05D009461 2.6e-46 189.1 160 61.9
Ciclev10006109m.g Citrus clementina HOM05D007488 ORTHO05D009461 5.3e-44 181.4 160 56.9
PGR142G4416 Punica granatum HOM05D007488 ORTHO05D009461 9.1e-44 180.6 161 57.1
Cc06_g19180 Coffea canephora HOM05D007488 ORTHO05D009461 7.7e-43 177.6 158 58.9
Migut.K00133 Erythranthe guttata HOM05D007488 ORTHO05D009461 1.3e-42 176.8 158 58.2
Lsat_1_v5_gn_5_157940 Lactuca sativa HOM05D007488 ORTHO05D009461 6.5e-42 174.5 147 57.8
Manes.09G005400 Manihot esculenta HOM05D007488 ORTHO05D009461 1.9e-41 172.9 160 55.6
Hund19096 Selenicereus undatus HOM05D007488 ORTHO05D009461 2.5e-41 172.6 162 58.6
Prupe.7G038600 Prunus persica HOM05D007488 ORTHO05D009461 3.2e-41 172.2 183 50.3
Actinidia01825 Actinidia chinensis HOM05D007488 ORTHO05D009461 7.2e-41 171.0 160 57.5
Ca_08393_v3 Cicer arietinum L. HOM05D007488 ORTHO05D009461 9.4e-41 170.6 158 54.4
Psat3g078680 Pisum sativum HOM05D007488 ORTHO05D009461 1.2e-40 170.2 158 55.1
Dinv09710 Davidia involucrata HOM05D007488 ORTHO05D009461 3.6e-40 168.7 160 55.6
MD14G1087900 Malus domestica HOM05D007488 ORTHO05D009461 3.6e-40 168.7 160 55.6
CAN.G317.6 Capsicum annuum HOM05D007488 ORTHO05D009461 6.1e-40 167.9 158 56.3
Nn4g25823 Nelumbo nucifera HOM05D007488 ORTHO05D009461 2.3e-39 166.0 161 57.8
Lalb_Chr22g0357421 Lupinus albus HOM05D007488 ORTHO05D009461 3.0e-39 165.6 159 56.0
Nitab4.5_0000424g0040 Nicotiana tabacum HOM05D007488 ORTHO05D009461 8.8e-39 164.1 159 56.6
DCAR_016880 Daucus carota HOM05D007488 ORTHO05D009461 1.1e-38 163.7 160 56.2
MSTRG.19810 Avicennia marina HOM05D007488 ORTHO05D009461 2.0e-38 162.9 158 54.4
Eucgr.A02247 Eucalyptus grandis HOM05D007488 ORTHO05D009461 2.0e-38 162.9 157 53.5
Lj1g0022068 Lotus japonicus HOM05D007488 ORTHO05D009461 2.0e-38 162.9 160 51.2
Nitab4.5_0001937g0020 Nicotiana tabacum HOM05D007488 ORTHO05D009461 2.0e-38 162.9 159 56.0
AUR62030320 Chenopodium quinoa HOM05D007488 ORTHO05D009461 2.6e-38 162.5 164 51.8
HanXRQChr03g0061531 Helianthus annuus HOM05D007488 ORTHO05D009461 3.3e-38 162.2 149 54.4
Medtr7g089940 Medicago truncatula HOM05D007488 ORTHO05D009461 3.3e-38 162.2 158 53.2
TPR.G30624 Trifolium pratense HOM05D007488 ORTHO05D009461 7.4e-38 161.0 158 51.9
CiPaw.09G047600 Carya illinoinensis HOM05D007488 ORTHO05D009461 2.8e-37 159.1 161 54.7
AUR62018346 Chenopodium quinoa HOM05D007488 ORTHO05D009461 4.8e-37 158.3 164 52.4
Cpa.g.sc5.171 Carica papaya HOM05D007488 ORTHO05D009461 2.4e-36 156.0 162 47.5
ECA248G2641 Erigeron canadensis HOM05D007488 ORTHO05D009461 2.4e-36 156.0 149 55.0
TWI74G0203 Tripterygium wilfordii HOM05D007488 ORTHO05D009461 2.4e-36 156.0 145 54.5
Duzib106G1788 Durio zibethinus HOM05D007488 ORTHO05D009461 3.1e-36 155.6 153 52.3
Sopen03g012080 Solanum pennellii HOM05D007488 ORTHO05D009461 5.3e-36 154.8 158 52.5
Atru.chr1.1442 Acer truncatum HOM05D007488 ORTHO05D009461 9.1e-36 154.1 162 50.0
CANSAT64G0776 Cannabis sativa HOM05D007488 ORTHO05D009461 7.7e-35 151.0 164 50.0
Peaxi162Scf00076g00524 Petunia axillaris HOM05D007488 ORTHO05D009461 1.7e-34 149.8 146 51.4
Thecc.05G135000 Theobroma cacao HOM05D007488 ORTHO05D009461 1.7e-34 149.8 150 52.7
THA.LOC104803261 Tarenaya hassleriana HOM05D007488 ORTHO05D009461 6.5e-34 147.9 163 46.0
CARHR136300 Cardamine hirsuta HOM05D007488 ORTHO05D009461 1.1e-33 147.1 161 46.0
Nitab4.5_0000812g0120 Nicotiana tabacum HOM05D007488 ORTHO05D009461 1.1e-33 147.1 158 46.8
EL10Ac3g07236 Beta vulgaris HOM05D007488 ORTHO05D009461 1.5e-33 146.7 160 51.9
FvH4_6g45840 Fragaria vesca HOM05D007488 ORTHO05D009461 3.2e-33 145.6 187 44.9
FAN05G4359 Fragaria x ananassa HOM05D007488 ORTHO05D009461 5.5e-33 144.8 186 45.7
Nitab4.5_0006279g0050 Nicotiana tabacum HOM05D007488 ORTHO05D009461 9.4e-33 144.1 158 46.8
Aqoxy2G00394 Aquilegia oxysepala HOM05D007488 ORTHO05D009461 1.6e-32 143.3 188 44.1
FAN02G3897 Fragaria x ananassa HOM05D007488 ORTHO05D009461 3.6e-32 142.1 187 44.4
Oeu063781.2 Olea europaea HOM05D004518 ORTHO05D005434 3.6e-32 142.1 108 65.7
Sc18g0003830 Simmondsia chinensis HOM05D007488 ORTHO05D009461 3.6e-32 142.1 141 48.9
SalBow1G5076 Salvia bowleyana HOM05D007488 ORTHO05D009461 6.1e-32 141.4 158 47.5
SalBow1G6194 Salvia bowleyana HOM05D007488 ORTHO05D009461 6.1e-32 141.4 158 47.5
AL4G39170 Arabidopsis lyrata HOM05D007488 ORTHO05D009461 1.4e-31 140.2 161 44.7
Sp4g23500 Schrenkiella parvula HOM05D007488 ORTHO05D009461 1.4e-31 140.2 161 44.1
AT2G41200 Arabidopsis thaliana HOM05D007488 ORTHO05D009461 2.3e-31 139.4 161 44.7
BcaB01g03485 Brassica carinata HOM05D007488 ORTHO05D009461 4.0e-31 138.7 161 42.9
BcaC01g05355 Brassica carinata HOM05D007488 ORTHO05D009461 1.2e-30 137.1 161 42.9
C03p27550 Brassica napus HOM05D007488 ORTHO05D009461 1.2e-30 137.1 161 42.9
BolC3t15128H Brassica oleracea HOM05D007488 ORTHO05D009461 1.2e-30 137.1 161 42.9
PSO339G1058 Papaver somniferum HOM05D007488 ORTHO05D009461 1.2e-30 137.1 161 48.4
SGA_v2.0_scaffold94G28540 Striga asiatica HOM05D007488 ORTHO05D009461 1.5e-30 136.7 149 49.0
arahy.Tifrunner.gnm1.ann1.8RZU3Q Arachis hypogaea HOM05D007488 ORTHO05D009461 2.0e-30 136.3 166 48.2
Carub.0004s2351 Capsella rubella HOM05D007488 ORTHO05D009461 2.0e-30 136.3 133 48.9
A03p23120 Brassica napus HOM05D007488 ORTHO05D009461 2.6e-30 136.0 161 42.2
BraA03t11533Z Brassica rapa HOM05D007488 ORTHO05D009461 2.6e-30 136.0 161 42.2
TAR369G0408 Trochodendron aralioides HOM05D007488 ORTHO05D009461 4.4e-30 135.2 175 47.4
Thhalv10017345m.g Eutrema salsugineum HOM05D007488 ORTHO05D009461 5.7e-30 134.8 161 42.2
Gohir.A11G307200 Gossypium hirsutum HOM05D007488 ORTHO05D009461 5.7e-30 134.8 154 47.4
VMungo1383G0792 Vigna mungo HOM05D007488 ORTHO05D009461 5.7e-30 134.8 162 47.5
Phvul.001G123700 Phaseolus vulgaris HOM05D007488 ORTHO05D009461 7.5e-30 134.4 164 48.2
Gohir.D11G322700 Gossypium hirsutum HOM05D007488 ORTHO05D009461 9.7e-30 134.0 154 46.1
arahy.Tifrunner.gnm1.ann1.Z4B7ZU Arachis hypogaea HOM05D007488 ORTHO05D009461 1.7e-29 133.3 166 47.6
Gorai.007G352800 Gossypium raimondii HOM05D007488 ORTHO05D009461 2.8e-29 132.5 154 45.5
Glyma.03G128000 Glycine max HOM05D007488 ORTHO05D009461 1.2e-27 127.1 161 44.7
Potri.006G038600 Populus trichocarpa HOM05D007488 ORTHO05D009461 1.6e-27 126.7 167 43.1
RcHm_v2.0_Chr2g0164041 Rosa chinensis HOM05D007488 ORTHO05D009461 2.0e-27 126.3 162 44.4
Ah.04g150940 Amaranthus hybridus HOM05D007488 ORTHO05D009461 3.5e-27 125.6 106 63.2
Glyma.19G130600 Glycine max HOM05D007488 ORTHO05D009461 1.0e-26 124.0 161 44.7
Sopen10g029120 Solanum pennellii HOM05D000484 ORTHO05D000346 1.8e-20 103.2 137 39.4
GSVIVG01033626001 Vitis vinifera HOM05D007488 ORTHO05D009461 7.0e-20 101.3 159 39.0
FAN09G2471 Fragaria x ananassa HOM05D007488 ORTHO05D009461 3.5e-19 99.0 158 39.2
FAN14G1565 Fragaria x ananassa HOM05D007488 ORTHO05D009461 3.5e-19 99.0 297 27.9
Lj1P1093T64 Lonicera japonica HOM05D007488 ORTHO05D009461 5.9e-19 98.2 84 57.1
Aa31LG3G800 Aethionema arabicum HOM05D007488 ORTHO05D009461 1.3e-18 97.1 84 53.6
Peaxi162Scf00701g00057 Petunia axillaris HOM05D007488 ORTHO05D009461 2.9e-18 95.9 72 62.5
PSO384G4473 Papaver somniferum HOM05D007488 ORTHO05D009461 3.8e-18 95.5 91 56.0
BcaC02g12760 Brassica carinata HOM05D007488 ORTHO05D009461 8.6e-18 94.4 161 34.8
CDE09G0800 Ceratophyllum demersum HOM05D007488 ORTHO05D009461 3.6e-16 89.0 148 32.4
C04p02520 Brassica napus HOM05D007488 ORTHO05D009461 8.9e-15 84.3 95 46.3
BolC4t21895H Brassica oleracea HOM05D007488 ORTHO05D009461 1.5e-14 83.6 76 51.3
Solyc03g058440.1 Solanum lycopersicum HOM05D007488 ORTHO05D009461 1.5e-14 83.6 66 60.6
MBI18_g37945_MAGBIO Magnolia biondii HOM05D007488 ORTHO05D009461 6.3e-13 78.2 118 41.5
unitig_21.g20692 Utricularia gibba HOM05D007488 ORTHO05D009461 1.0e-07 60.8 76 43.4
A05p02110 Brassica napus HOM05D007488 ORTHO05D009461 5.2e-07 58.5 98 38.8
BraA05t19207Z Brassica rapa HOM05D007488 ORTHO05D009461 5.2e-07 58.5 98 38.8
MBI13_g11934_MAGBIO Magnolia biondii HOM05D007488 ORTHO05D009461 5.8e-06 55.1 70 42.9


User provided reference genes

Program Settings