Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p009661 Quercus lobata HOM05D008027 ORTHO05D009737 1.9e-36 155.2 73 100.0
Cfa005561 Carpinus fangiana HOM05D008027 ORTHO05D009737 1.6e-19 99.0 61 75.4
CiPaw.05G041100 Carya illinoinensis HOM05D008027 ORTHO05D009737 2.6e-17 91.7 59 71.2
Thecc.02G042600 Theobroma cacao HOM05D008027 ORTHO05D009737 2.4e-15 85.1 59 67.8
COL.COLO4_17908 Corchorus olitorius HOM05D008027 ORTHO05D009737 1.6e-14 82.4 57 64.9
Lalb_Chr18g0060771 Lupinus albus HOM05D008027 ORTHO05D009737 2.7e-14 81.6 60 65.0
Lj6g0012761 Lotus japonicus HOM05D008027 ORTHO05D009737 4.6e-14 80.9 57 64.9
Dinv24246 Davidia involucrata HOM05D008027 ORTHO05D009737 2.3e-13 78.6 60 70.0
Gohir.D04G171400 Gossypium hirsutum HOM05D008027 ORTHO05D009737 5.0e-13 77.4 56 62.5
MD15G1417600 Malus domestica HOM05D008027 ORTHO05D009737 8.6e-13 76.6 50 70.0
Prupe.1G561600 Prunus persica HOM05D008027 ORTHO05D009737 8.6e-13 76.6 61 63.9
Gorai.012G160300 Gossypium raimondii HOM05D008027 ORTHO05D009737 1.1e-12 76.3 56 62.5
Gohir.A04G126500 Gossypium hirsutum HOM05D008027 ORTHO05D009737 2.5e-12 75.1 56 60.7
Medtr2g007950 Medicago truncatula HOM05D008027 ORTHO05D009737 2.5e-12 75.1 66 56.1
TPR.G19740 Trifolium pratense HOM05D008027 ORTHO05D009737 2.5e-12 75.1 64 54.7
TPR.G19754 Trifolium pratense HOM05D008027 ORTHO05D009737 2.5e-12 75.1 64 54.7
TWI14G0810 Tripterygium wilfordii HOM05D008027 ORTHO05D009737 4.3e-12 74.3 57 56.1
Sabra15G0135300 Salix brachista HOM05D008027 ORTHO05D009737 2.1e-11 72.0 57 54.4
Oeu018394.1 Olea europaea HOM05D008027 ORTHO05D009737 2.8e-11 71.6 60 58.3
Atru.chr6.991 Acer truncatum HOM05D008027 ORTHO05D009737 3.6e-11 71.2 45 68.9
Hma1.2p1_0557F.1_g178210 Hydrangea macrophylla HOM05D008027 ORTHO05D009737 3.6e-11 71.2 59 61.0
Manes.09G074900 Manihot esculenta HOM05D008027 ORTHO05D009737 4.7e-11 70.9 65 50.8
RcHm_v2.0_Chr7g0224551 Rosa chinensis HOM05D008027 ORTHO05D009737 1.0e-10 69.7 61 59.0
Glyma.15G049600 Glycine max HOM05D008027 ORTHO05D009737 1.4e-10 69.3 58 53.4
Nn5g28740 Nelumbo nucifera HOM05D008027 ORTHO05D009737 1.4e-10 69.3 66 53.0
FvH4_5g30240 Fragaria vesca HOM05D008027 ORTHO05D009737 2.3e-10 68.6 61 57.4
FAN18G1531 Fragaria x ananassa HOM05D008027 ORTHO05D009737 2.3e-10 68.6 61 57.4
Glyma.08G183000 Glycine max HOM05D008027 ORTHO05D009737 2.3e-10 68.6 57 52.6
Migut.N01020 Erythranthe guttata HOM05D008027 ORTHO05D009737 4.0e-10 67.8 58 48.3
Cpa.g.sc2.39 Carica papaya HOM05D000028 ORTHO05D001343 6.8e-10 67.0 56 58.9
BcaC05g26684 Brassica carinata HOM05D008027 ORTHO05D009737 1.5e-09 65.9 66 56.1
Lsat_1_v5_gn_7_79741 Lactuca sativa HOM05D008027 ORTHO05D009737 2.0e-09 65.5 60 51.7
arahy.Tifrunner.gnm1.ann1.6UKJ3N Arachis hypogaea HOM05D008027 ORTHO05D009737 3.4e-09 64.7 63 55.6
C05p25230 Brassica napus HOM05D008027 ORTHO05D009737 3.4e-09 64.7 67 52.2
arahy.Tifrunner.gnm1.ann1.70LJUW Arachis hypogaea HOM05D008027 ORTHO05D009737 4.4e-09 64.3 61 55.7
A09p39140 Brassica napus HOM05D008027 ORTHO05D009737 4.4e-09 64.3 63 55.6
BraA09t39413Z Brassica rapa HOM05D008027 ORTHO05D009737 4.4e-09 64.3 63 55.6
FAN04G0864 Fragaria x ananassa HOM05D008027 ORTHO05D009737 4.4e-09 64.3 61 55.7
Prupe.4G249100 Prunus persica HOM05D008027 ORTHO05D009737 4.4e-09 64.3 31 80.6
AT1G25275 Arabidopsis thaliana HOM05D008027 ORTHO05D009737 5.8e-09 63.9 60 48.3
Psat0s5304g0040 Pisum sativum HOM05D008027 ORTHO05D009737 5.8e-09 63.9 67 52.2
Aa31LG7G9220 Aethionema arabicum HOM05D008027 ORTHO05D009737 1.3e-08 62.8 64 54.7
Sp1g22980 Schrenkiella parvula HOM05D008027 ORTHO05D009737 1.3e-08 62.8 61 52.5
AL1G40080 Arabidopsis lyrata HOM05D008027 ORTHO05D009737 1.7e-08 62.4 68 48.5
BolC5t31257H Brassica oleracea HOM05D008027 ORTHO05D009737 2.2e-08 62.0 63 54.0
CANSAT11G0026 Cannabis sativa HOM05D008027 ORTHO05D009737 2.2e-08 62.0 60 48.3
BcaC05g26480 Brassica carinata HOM05D008027 ORTHO05D009737 3.7e-08 61.2 63 52.4
CsaV3_3G018720 Cucumis sativus L. HOM05D008027 ORTHO05D009737 3.7e-08 61.2 51 54.9
BcaC01g01678 Brassica carinata HOM05D008027 ORTHO05D009737 4.9e-08 60.8 61 50.8
C03p73120 Brassica napus HOM05D008027 ORTHO05D009737 4.9e-08 60.8 61 50.8
BolC3t19607H Brassica oleracea HOM05D008027 ORTHO05D009737 4.9e-08 60.8 61 50.8
BcaB03g12037 Brassica carinata HOM05D008027 ORTHO05D009737 6.4e-08 60.5 61 50.8
A08p26830 Brassica napus HOM05D008027 ORTHO05D009737 6.4e-08 60.5 61 50.8
BraA08t34629Z Brassica rapa HOM05D008027 ORTHO05D009737 6.4e-08 60.5 61 50.8
Carub.0001s2529 Capsella rubella HOM05D008027 ORTHO05D009737 6.4e-08 60.5 61 50.8
Thhalv10009240m.g Eutrema salsugineum HOM05D008027 ORTHO05D009737 6.4e-08 60.5 66 51.5
CARHR026260 Cardamine hirsuta HOM05D008027 ORTHO05D009737 8.3e-08 60.1 61 50.8
ClCG05G009870 Citrullus lanatus HOM05D008027 ORTHO05D009737 1.4e-07 59.3 50 54.0
MBI16_g27579_MAGBIO Magnolia biondii HOM05D067604 ORTHO05D048572 1.9e-07 58.9 67 40.3
MBI16_g27580_MAGBIO Magnolia biondii HOM05D067604 ORTHO05D048572 1.9e-07 58.9 67 40.3
Potri.015G116800 Populus trichocarpa HOM05D008027 ORTHO05D009737 2.4e-07 58.5 57 43.9
Sopen01g047250 Solanum pennellii HOM05D011465 ORTHO05D009737 5.4e-07 57.4 62 46.8
Nitab4.5_0002684g0120 Nicotiana tabacum HOM05D011465 ORTHO05D009737 7.0e-07 57.0 62 45.2
Nitab4.5_0010259g0010 Nicotiana tabacum HOM05D011465 ORTHO05D009737 7.0e-07 57.0 60 46.7
Sed0014181 Sechium edule HOM05D008027 ORTHO05D009737 9.2e-07 56.6 50 52.0
Aqoxy5G04168 Aquilegia oxysepala HOM05D008027 ORTHO05D009737 3.5e-06 54.7 61 42.6
Glyma.03G068101 Glycine max HOM05D008027 ORTHO05D009737 4.6e-06 54.3 41 53.7
Peaxi162Scf01290g00250 Petunia axillaris HOM05D011465 ORTHO05D009737 7.8e-06 53.5 51 45.1


User provided reference genes

Program Settings