Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p007469 Quercus lobata HOM05D006969 ORTHO05D008826 1.6e-80 302.8 160 100.0
QL07p031897 Quercus lobata HOM05D006969 ORTHO05D008826 3.4e-62 241.9 142 92.3
Haze_21189 Corylus avellana HOM05D006969 ORTHO05D008826 1.3e-32 143.7 146 62.3
CiPaw.10G165400 Carya illinoinensis HOM05D006969 ORTHO05D008826 2.0e-30 136.3 147 60.5
Cfa017015 Carpinus fangiana HOM05D006969 ORTHO05D008826 3.8e-29 132.1 135 57.8
Sabra06G0085100 Salix brachista HOM05D006969 ORTHO05D008826 7.1e-28 127.9 144 54.2
Prupe.6G295300 Prunus persica HOM05D006969 ORTHO05D008826 9.3e-28 127.5 138 58.7
Dinv16967 Davidia involucrata HOM05D006969 ORTHO05D008826 1.2e-27 127.1 135 57.0
MD04G1175800 Malus domestica HOM05D006969 ORTHO05D008826 1.2e-27 127.1 129 58.9
FAN02G3877 Fragaria x ananassa HOM05D006969 ORTHO05D008826 6.0e-27 124.8 140 54.3
Manes.09G123300 Manihot esculenta HOM05D006969 ORTHO05D008826 6.0e-27 124.8 137 60.6
TAR623G0846 Trochodendron aralioides HOM05D006969 ORTHO05D008826 1.3e-26 123.6 135 54.8
FvH4_6g09670 Fragaria vesca HOM05D006969 ORTHO05D008826 3.9e-26 122.1 140 53.6
FAN05G1635 Fragaria x ananassa HOM05D006969 ORTHO05D008826 3.9e-26 122.1 140 52.9
FAN09G3593 Fragaria x ananassa HOM05D006969 ORTHO05D008826 3.9e-26 122.1 140 51.4
FAN14G4271 Fragaria x ananassa HOM05D006969 ORTHO05D008826 3.9e-26 122.1 140 53.6
Potri.016G138300 Populus trichocarpa HOM05D006969 ORTHO05D008826 1.1e-25 120.6 141 53.9
Rhsim04G0121200 Rhododendron simsii HOM05D006969 ORTHO05D008826 2.5e-25 119.4 132 57.6
vmacro08948 Vaccinium macrocarpon HOM05D006969 ORTHO05D008826 3.3e-25 119.0 141 53.2
Cpa.g.sc86.76 Carica papaya HOM05D006969 ORTHO05D008826 4.3e-25 118.6 140 53.6
RcHm_v2.0_Chr3g0460321 Rosa chinensis HOM05D006969 ORTHO05D008826 7.4e-25 117.9 140 52.1
PGR004G2771 Punica granatum HOM05D006969 ORTHO05D008826 9.6e-25 117.5 144 54.2
Potri.006G109400 Populus trichocarpa HOM05D006969 ORTHO05D008826 1.3e-24 117.1 142 53.5
Sabra04G0154500 Salix brachista HOM05D006969 ORTHO05D008826 1.3e-24 117.1 141 54.6
TWI74G1273 Tripterygium wilfordii HOM05D006969 ORTHO05D008826 1.4e-23 113.6 149 51.0
CANSAT25G2928 Cannabis sativa HOM05D006969 ORTHO05D008826 5.3e-23 111.7 154 48.1
Nitab4.5_0002758g0050 Nicotiana tabacum HOM05D006969 ORTHO05D008826 2.6e-22 109.4 144 50.7
GSVIVG01030170001 Vitis vinifera HOM05D006969 ORTHO05D008826 2.6e-22 109.4 141 51.8
Ciclev10013711m.g Citrus clementina HOM05D006969 ORTHO05D008826 4.5e-22 108.6 146 48.6
Cc06_g18790 Coffea canephora HOM05D006969 ORTHO05D008826 4.5e-22 108.6 141 51.1
MELO3C025225.2 Cucumis melo HOM05D006969 ORTHO05D008826 9.9e-22 107.5 156 48.7
Medtr7g073500 Medicago truncatula HOM05D006969 ORTHO05D008826 1.3e-21 107.1 133 51.1
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.7e-21 106.7 129 52.7
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.7e-21 106.7 129 52.7
Psat3g118680 Pisum sativum HOM05D006969 ORTHO05D008826 1.7e-21 106.7 143 47.6
CsaV3_4G027220 Cucumis sativus L. HOM05D006969 ORTHO05D008826 2.2e-21 106.3 136 52.9
VMungo1383G3295 Vigna mungo HOM05D006969 ORTHO05D008826 2.9e-21 105.9 134 46.3
MD05G1222900 Malus domestica HOM05D006969 ORTHO05D008826 8.4e-21 104.4 137 48.9
MD12G1190200 Malus domestica HOM05D006969 ORTHO05D008826 8.4e-21 104.4 137 48.9
Phvul.008G081600 Phaseolus vulgaris HOM05D006969 ORTHO05D008826 1.4e-20 103.6 134 46.3
Glyma.18G213000 Glycine max HOM05D006969 ORTHO05D008826 1.9e-20 103.2 137 48.2
COL.COLO4_03930 Corchorus olitorius HOM05D006969 ORTHO05D008826 3.2e-20 102.4 162 44.4
AUR62006430 Chenopodium quinoa HOM05D006969 ORTHO05D008826 4.2e-20 102.1 139 49.6
Nitab4.5_0000048g0110 Nicotiana tabacum HOM05D006969 ORTHO05D008826 4.2e-20 102.1 144 46.5
ClCG04G006330 Citrullus lanatus HOM05D006969 ORTHO05D008826 7.1e-20 101.3 146 46.6
ECA248G1739 Erigeron canadensis HOM05D000251 ORTHO05D002506 9.3e-20 100.9 153 43.1
HanXRQChr01g0000581 Helianthus annuus HOM05D006969 ORTHO05D008826 9.3e-20 100.9 157 43.3
Nitab4.5_0000430g0190 Nicotiana tabacum HOM05D006969 ORTHO05D008826 9.3e-20 100.9 145 48.3
Solyc06g082850.4 Solanum lycopersicum HOM05D006969 ORTHO05D008826 1.2e-19 100.5 136 49.3
PGSC0003DMG400027666 Solanum tuberosum HOM05D006969 ORTHO05D008826 1.2e-19 100.5 136 49.3
Atru.chr8.92 Acer truncatum HOM05D006969 ORTHO05D008826 1.6e-19 100.1 131 48.9
PSO384G0233 Papaver somniferum HOM05D006969 ORTHO05D008826 1.6e-19 100.1 147 44.9
Peaxi162Scf00732g00235 Petunia axillaris HOM05D006969 ORTHO05D008826 1.6e-19 100.1 140 45.7
Sed0006435 Sechium edule HOM05D006969 ORTHO05D008826 2.1e-19 99.8 134 51.5
Sc20g0007050 Simmondsia chinensis HOM05D006969 ORTHO05D008826 2.1e-19 99.8 126 53.2
Glyma.09G273800 Glycine max HOM05D006969 ORTHO05D008826 2.7e-19 99.4 126 50.0
Sopen06g034210 Solanum pennellii HOM05D006969 ORTHO05D008826 2.7e-19 99.4 136 49.3
PSO339G3220 Papaver somniferum HOM05D006969 ORTHO05D008826 3.5e-19 99.0 147 44.2
Thecc.04G150100 Theobroma cacao HOM05D006969 ORTHO05D008826 4.6e-19 98.6 148 47.3
Duzib151G0817 Durio zibethinus HOM05D006969 ORTHO05D008826 6.0e-19 98.2 144 44.4
Lj1g0009458 Lotus japonicus HOM05D006969 ORTHO05D008826 7.9e-19 97.8 142 45.8
AUR62029780 Chenopodium quinoa HOM05D006969 ORTHO05D008826 1.0e-18 97.4 143 46.2
Hund19755 Selenicereus undatus HOM05D006969 ORTHO05D008826 1.3e-18 97.1 132 47.0
A03p00060 Brassica napus HOM05D006969 ORTHO05D008826 6.7e-18 94.7 128 49.2
Aqoxy2G00712 Aquilegia oxysepala HOM05D006969 ORTHO05D008826 8.7e-18 94.4 132 45.5
C03p00200 Brassica napus HOM05D006969 ORTHO05D008826 1.1e-17 94.0 128 48.4
BraA03t09395Z Brassica rapa HOM05D006969 ORTHO05D008826 1.1e-17 94.0 125 49.6
BcaB01g06123 Brassica carinata HOM05D006969 ORTHO05D008826 1.9e-17 93.2 125 48.8
BolC3t12589H Brassica oleracea HOM05D006969 ORTHO05D008826 1.9e-17 93.2 125 48.8
SalBow7G4609 Salvia bowleyana HOM05D006969 ORTHO05D008826 3.3e-17 92.4 90 57.8
Duzib212G0164 Durio zibethinus HOM05D006969 ORTHO05D008826 4.3e-17 92.0 101 53.5
Ah.15g089930 Amaranthus hybridus HOM05D006969 ORTHO05D008826 7.4e-17 91.3 144 45.8
Gohir.D10G112800 Gossypium hirsutum HOM05D006969 ORTHO05D008826 9.6e-17 90.9 143 45.5
Gorai.011G124600 Gossypium raimondii HOM05D006969 ORTHO05D008826 9.6e-17 90.9 143 45.5
EL10Ac7g17114 Beta vulgaris HOM05D006969 ORTHO05D008826 1.6e-16 90.1 146 44.5
Gohir.A10G153400 Gossypium hirsutum HOM05D006969 ORTHO05D008826 2.1e-16 89.7 142 43.7
Lalb_Chr01g0023811 Lupinus albus HOM05D006969 ORTHO05D008826 2.1e-16 89.7 139 46.8
MSTRG.18936 Avicennia marina HOM05D006969 ORTHO05D008826 3.7e-16 89.0 128 46.9
BcaB01g04376 Brassica carinata HOM05D006969 ORTHO05D008826 3.7e-16 89.0 74 63.5
Thhalv10015463m.g Eutrema salsugineum HOM05D006969 ORTHO05D008826 4.8e-16 88.6 74 66.2
Oeu038184.1 Olea europaea HOM05D006969 ORTHO05D008826 4.8e-16 88.6 135 41.5
MSTRG.5490 Avicennia marina HOM05D006969 ORTHO05D008826 6.2e-16 88.2 142 41.5
Gorai.005G003600 Gossypium raimondii HOM05D006969 ORTHO05D008826 8.2e-16 87.8 134 45.5
Sp6g41160 Schrenkiella parvula HOM05D006969 ORTHO05D008826 8.2e-16 87.8 71 67.6
TPR.G24295 Trifolium pratense HOM05D006969 ORTHO05D008826 8.2e-16 87.8 89 55.1
Aa31LG5G11450 Aethionema arabicum HOM05D006969 ORTHO05D008826 1.4e-15 87.0 124 45.2
Gohir.D02G003100 Gossypium hirsutum HOM05D006969 ORTHO05D008826 1.8e-15 86.7 134 44.8
TWI77G0392 Tripterygium wilfordii HOM05D006969 ORTHO05D008826 4.0e-15 85.5 72 63.9
Gohir.A02G002800 Gossypium hirsutum HOM05D006969 ORTHO05D008826 9.0e-15 84.3 130 43.8
AT5G01910 Arabidopsis thaliana HOM05D006969 ORTHO05D008826 1.2e-14 84.0 72 63.9
Lsat_1_v5_gn_5_152061 Lactuca sativa HOM05D006969 ORTHO05D008826 2.0e-14 83.2 166 39.2
vmacro08947 Vaccinium macrocarpon HOM05D000266 ORTHO05D008826 2.6e-14 82.8 66 71.2
Rhsim04G0114700 Rhododendron simsii HOM05D006969 ORTHO05D008826 3.4e-14 82.4 74 63.5
Carub.0024s0013 Capsella rubella HOM05D006969 ORTHO05D008826 4.5e-14 82.0 124 41.9
AL6G10120 Arabidopsis lyrata HOM05D006969 ORTHO05D008826 7.6e-14 81.3 71 63.4
arahy.Tifrunner.gnm1.ann1.K8QDZW Arachis hypogaea HOM05D006969 ORTHO05D008826 7.6e-14 81.3 148 38.5
arahy.Tifrunner.gnm1.ann1.M5JM96 Arachis hypogaea HOM05D006969 ORTHO05D008826 1.7e-13 80.1 75 60.0
arahy.Tifrunner.gnm1.ann1.PQ2I5M Arachis hypogaea HOM05D006969 ORTHO05D008826 1.7e-13 80.1 75 60.0
arahy.Tifrunner.gnm1.ann1.F2WGAE Arachis hypogaea HOM05D006969 ORTHO05D008826 4.9e-13 78.6 66 63.6
Migut.J00029 Erythranthe guttata HOM05D006969 ORTHO05D008826 8.4e-13 77.8 67 59.7
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 1.1e-12 77.4 75 57.3
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 1.1e-12 77.4 75 57.3
Nitab4.5_0002655g0130 Nicotiana tabacum HOM05D006969 ORTHO05D008826 1.1e-12 77.4 107 44.9
Rhsim08G0240100 Rhododendron simsii HOM05D006969 ORTHO05D008826 1.1e-12 77.4 88 55.7
Nn5g26829 Nelumbo nucifera HOM05D006969 ORTHO05D008826 1.9e-12 76.6 113 44.2
Rhsim03G0028100 Rhododendron simsii HOM05D006969 ORTHO05D008826 1.9e-12 76.6 88 54.5
DCAR_023968 Daucus carota HOM05D006969 ORTHO05D008826 1.6e-11 73.6 76 53.9
unitig_22.g6613 Utricularia gibba HOM05D006969 ORTHO05D008826 1.6e-11 73.6 132 39.4
CARHR212260 Cardamine hirsuta HOM05D006969 ORTHO05D008826 2.1e-11 73.2 124 44.4
MBI03_g05807_MAGBIO Magnolia biondii HOM05D006969 ORTHO05D008826 3.5e-11 72.4 125 44.0
THA.LOC104823322 Tarenaya hassleriana HOM05D006969 ORTHO05D008826 4.6e-11 72.0 70 55.7
CDE06G1555 Ceratophyllum demersum HOM05D006969 ORTHO05D008826 2.3e-10 69.7 131 35.1
CDE07G1521 Ceratophyllum demersum HOM05D006969 ORTHO05D008826 1.6e-08 63.5 119 35.3
unitig_8.g3270 Utricularia gibba HOM05D006969 ORTHO05D008826 5.9e-06 55.1 53 54.7


User provided reference genes

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