Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p006514 Quercus lobata HOM05D003614 ORTHO05D004156 1.5e-58 229.2 109 100.0
QL03p003747 Quercus lobata HOM05D003614 ORTHO05D004156 3.1e-19 98.6 123 46.3
QL07p005711 Quercus lobata HOM05D003614 ORTHO05D004156 3.4e-13 78.6 192 31.8
QL07p006066 Quercus lobata HOM05D003614 ORTHO05D004156 4.4e-13 78.2 192 31.8
QL07p006290 Quercus lobata HOM05D003614 ORTHO05D004156 6.4e-12 74.3 164 33.5
Haze_19741 Corylus avellana HOM05D003614 ORTHO05D004156 1.9e-11 72.8 193 31.1
QL07p006078 Quercus lobata HOM05D003614 ORTHO05D004156 2.4e-11 72.4 192 31.2
Cfa016733 Carpinus fangiana HOM05D003614 ORTHO05D004156 1.2e-10 70.1 193 30.1
CiPaw.09G043900 Carya illinoinensis HOM05D003614 ORTHO05D004156 1.2e-10 70.1 193 30.6
MBI14_g19444_MAGBIO Magnolia biondii HOM05D003614 ORTHO05D004156 3.9e-09 65.1 193 28.0
Prupe.7G047200 Prunus persica HOM05D003614 ORTHO05D004156 5.0e-09 64.7 193 27.5
QL11p043104 Quercus lobata HOM05D003614 ORTHO05D004156 5.0e-09 64.7 100 41.0
COL.COLO4_33914 Corchorus olitorius HOM05D003614 ORTHO05D004156 6.6e-09 64.3 193 28.5
CANSAT54G1064 Cannabis sativa HOM05D003614 ORTHO05D004156 8.6e-09 63.9 100 39.0
FAN02G3060 Fragaria x ananassa HOM05D003614 ORTHO05D004156 1.1e-08 63.5 193 28.0
Atru.chr1.1276 Acer truncatum HOM05D003614 ORTHO05D004156 1.5e-08 63.2 193 28.0
CSS0031196 Camellia sinensis var. sinensis HOM05D003614 ORTHO05D004156 1.5e-08 63.2 193 28.5
MD12G1089700 Malus domestica HOM05D003614 ORTHO05D004156 1.5e-08 63.2 193 27.5
QL11p043133 Quercus lobata HOM05D003614 ORTHO05D004156 1.5e-08 63.2 100 40.0
Sed0022963 Sechium edule HOM05D003614 ORTHO05D004156 1.9e-08 62.8 100 39.0
FvH4_6g25070 Fragaria vesca HOM05D003614 ORTHO05D004156 3.3e-08 62.0 193 26.9
FAN09G2704 Fragaria x ananassa HOM05D003614 ORTHO05D004156 3.3e-08 62.0 193 27.5
FAN14G1287 Fragaria x ananassa HOM05D003614 ORTHO05D004156 3.3e-08 62.0 193 26.9
Manes.08G056200 Manihot esculenta HOM05D003614 ORTHO05D004156 3.3e-08 62.0 193 28.0
Nn1g04314 Nelumbo nucifera HOM05D003614 ORTHO05D004156 5.6e-08 61.2 194 26.3
PGR142G0250 Punica granatum HOM05D003614 ORTHO05D004156 5.6e-08 61.2 193 28.0
ClCG10G005410 Citrullus lanatus HOM05D003614 ORTHO05D004156 7.3e-08 60.8 99 38.4
MELO3C025378.2 Cucumis melo HOM05D003614 ORTHO05D004156 7.3e-08 60.8 99 38.4
Duzib128G0580 Durio zibethinus HOM05D003614 ORTHO05D004156 9.5e-08 60.5 193 28.0
CsaV3_3G005150 Cucumis sativus L. HOM05D003614 ORTHO05D004156 1.6e-07 59.7 99 37.4
Oeu008197.1 Olea europaea HOM05D003614 ORTHO05D004156 1.1e-06 57.0 105 34.3
Potri.006G043650 Populus trichocarpa HOM05D003614 ORTHO05D004156 1.1e-06 57.0 193 26.9
RcHm_v2.0_Chr2g0124831 Rosa chinensis HOM05D003614 ORTHO05D004156 1.1e-06 57.0 193 26.9
TPR.G13793 Trifolium pratense HOM05D003614 ORTHO05D004156 1.1e-06 57.0 193 27.5
Rhsim03G0033800 Rhododendron simsii HOM05D003614 ORTHO05D004156 1.4e-06 56.6 96 38.5
Rhsim10G0199100 Rhododendron simsii HOM05D003614 ORTHO05D004156 1.4e-06 56.6 96 38.5
Sabra06G0029800 Salix brachista HOM05D003614 ORTHO05D004156 2.3e-06 55.8 192 27.1
Sc13g0001410 Simmondsia chinensis HOM05D003614 ORTHO05D004156 2.3e-06 55.8 192 26.6
Glyma.16G116350 Glycine max HOM05D003614 ORTHO05D004156 4.0e-06 55.1 192 26.6
Glyma.16G222000 Glycine max HOM05D003614 ORTHO05D004156 4.0e-06 55.1 192 26.6
QL03p003469 Quercus lobata HOM05D003614 ORTHO05D004156 4.0e-06 55.1 147 31.3
QL03p003473 Quercus lobata HOM05D003614 ORTHO05D004156 4.0e-06 55.1 147 31.3
Aa31LG1G21260 Aethionema arabicum HOM05D003614 ORTHO05D004156 8.9e-06 53.9 96 34.4
Lalb_Chr02g0142191 Lupinus albus HOM05D003614 ORTHO05D004156 8.9e-06 53.9 106 32.1
TAR580G0003 Trochodendron aralioides HOM05D003614 ORTHO05D004156 8.9e-06 53.9 192 25.5


User provided reference genes

Program Settings