Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p005102 Quercus lobata HOM05D005262 ORTHO05D006590 1.3e-85 319.7 159 100.0
QL03p069106 Quercus lobata HOM05D005262 ORTHO05D006590 3.8e-82 308.1 156 98.1
QL93p1999_0168 Quercus lobata HOM05D005262 ORTHO05D006590 3.8e-82 308.1 156 98.1
CiPaw.05G130500 Carya illinoinensis HOM05D005262 ORTHO05D006590 2.2e-77 292.4 154 92.9
Cpa.g.sc57.36 Carica papaya HOM05D005262 ORTHO05D006590 3.8e-74 281.6 159 86.8
CSS0022308 Camellia sinensis var. sinensis HOM05D005262 ORTHO05D006590 8.5e-74 280.4 159 86.2
Dinv34128 Davidia involucrata HOM05D005262 ORTHO05D006590 3.6e-72 275.0 159 85.5
Haze_11969 Corylus avellana HOM05D001063 ORTHO05D000986 4.7e-72 274.6 158 84.8
TWI23G0893 Tripterygium wilfordii HOM05D005262 ORTHO05D006590 1.0e-71 273.5 159 81.8
GSVIVG01005152001 Vitis vinifera HOM05D005262 ORTHO05D006590 3.0e-71 271.9 156 86.5
Cfa008943 Carpinus fangiana HOM05D005262 ORTHO05D006590 6.8e-71 270.8 156 85.3
TWI59G0657 Tripterygium wilfordii HOM05D005262 ORTHO05D006590 8.8e-71 270.4 156 82.7
ClCG00G005120 Citrullus lanatus HOM05D005262 ORTHO05D006590 1.5e-70 269.6 157 84.7
ClCG05G024080 Citrullus lanatus HOM05D005262 ORTHO05D006590 1.5e-70 269.6 157 84.7
Nitab4.5_0001147g0090 Nicotiana tabacum HOM05D005262 ORTHO05D006590 2.6e-70 268.9 159 84.3
Nitab4.5_0005903g0020 Nicotiana tabacum HOM05D005262 ORTHO05D006590 4.4e-70 268.1 159 84.9
GSVIVG01012217001 Vitis vinifera HOM05D005262 ORTHO05D006590 1.3e-69 266.5 155 84.5
Sc04g0007950 Simmondsia chinensis HOM05D005262 ORTHO05D006590 3.7e-69 265.0 159 81.8
Solyc07g017410.3 Solanum lycopersicum HOM05D005262 ORTHO05D006590 3.7e-69 265.0 159 83.6
Sopen07g006120 Solanum pennellii HOM05D005262 ORTHO05D006590 3.7e-69 265.0 159 83.6
PGSC0003DMG400009555 Solanum tuberosum HOM05D005262 ORTHO05D006590 3.7e-69 265.0 159 83.6
MD07G1136300 Malus domestica HOM05D005262 ORTHO05D006590 1.8e-68 262.7 158 81.6
CAN.G293.9 Capsicum annuum HOM05D005262 ORTHO05D006590 3.1e-68 261.9 159 81.1
TAR496G0001 Trochodendron aralioides HOM05D005262 ORTHO05D006590 3.1e-68 261.9 156 82.7
TAR629G1254 Trochodendron aralioides HOM05D005262 ORTHO05D006590 3.1e-68 261.9 156 82.7
Sed0024226 Sechium edule HOM05D005262 ORTHO05D006590 2.0e-67 259.2 158 81.0
Oeu054855.1 Olea europaea HOM05D005262 ORTHO05D006590 4.5e-67 258.1 157 82.8
Eucgr.I00218 Eucalyptus grandis HOM05D005262 ORTHO05D006590 7.7e-67 257.3 159 79.9
TAR365G0711 Trochodendron aralioides HOM05D005262 ORTHO05D006590 7.7e-67 257.3 158 80.4
MD01G1063000 Malus domestica HOM05D005262 ORTHO05D006590 1.3e-66 256.5 158 79.7
Peaxi162Scf00320g00123 Petunia axillaris HOM05D005262 ORTHO05D006590 1.7e-66 256.1 157 80.9
Hund04408 Selenicereus undatus HOM05D005262 ORTHO05D006590 1.7e-66 256.1 157 80.9
Hma1.2p1_1954F.1_g308920 Hydrangea macrophylla HOM05D005262 ORTHO05D006590 2.2e-66 255.8 178 73.6
Thecc.10G075900 Theobroma cacao HOM05D005262 ORTHO05D006590 5.0e-66 254.6 159 79.9
Lj8C444T0 Lonicera japonica HOM05D005262 ORTHO05D006590 1.1e-65 253.4 155 80.6
Lj7A251G27 Lonicera japonica HOM05D005262 ORTHO05D006590 1.5e-65 253.1 158 79.7
MELO3C012117.2 Cucumis melo HOM05D005262 ORTHO05D006590 4.2e-65 251.5 157 80.3
Lj8C474T0 Lonicera japonica HOM05D005262 ORTHO05D006590 4.2e-65 251.5 158 79.1
Prupe.2G171300 Prunus persica HOM05D005262 ORTHO05D006590 1.2e-64 250.0 154 80.5
Rhsim09G0138500 Rhododendron simsii HOM05D005262 ORTHO05D006590 1.2e-64 250.0 156 80.1
Atru.chr11.1609 Acer truncatum HOM05D005262 ORTHO05D006590 1.6e-64 249.6 156 77.6
Lj7C254T2 Lonicera japonica HOM05D005262 ORTHO05D006590 4.7e-64 248.1 155 78.7
Ciclev10032849m.g Citrus clementina HOM05D005262 ORTHO05D006590 2.3e-63 245.7 159 76.1
Duzib114G0995 Durio zibethinus HOM05D005262 ORTHO05D006590 2.3e-63 245.7 159 78.0
CsaV3_5G032960 Cucumis sativus L. HOM05D005262 ORTHO05D006590 4.0e-63 245.0 157 77.1
PGR102G3250 Punica granatum HOM05D005262 ORTHO05D006590 6.8e-63 244.2 156 77.6
HPP92_008614 Vanilla planifolia HOM05D005262 ORTHO05D006590 1.5e-62 243.0 158 74.7
Aqoxy1G02417 Aquilegia oxysepala HOM05D005262 ORTHO05D006590 7.5e-62 240.7 155 75.5
PSO063G7616 Papaver somniferum HOM05D005262 ORTHO05D006590 7.5e-62 240.7 155 75.5
Aqoxy2G00811 Aquilegia oxysepala HOM05D005262 ORTHO05D006590 1.3e-61 240.0 155 74.8
PSO832G0345 Papaver somniferum HOM05D005262 ORTHO05D006590 4.9e-61 238.0 155 74.2
Cc00_g16620 Coffea canephora HOM05D005262 ORTHO05D006590 6.3e-61 237.7 159 71.7
Gohir.D04G003700 Gossypium hirsutum HOM05D005262 ORTHO05D006590 1.1e-60 236.9 159 76.1
Gorai.012G004900 Gossypium raimondii HOM05D005262 ORTHO05D006590 1.1e-60 236.9 159 76.1
HanXRQChr15g0476911 Helianthus annuus HOM05D005262 ORTHO05D006590 1.4e-60 236.5 158 74.1
Lj6g0009238 Lotus japonicus HOM05D005262 ORTHO05D006590 4.1e-60 235.0 159 72.3
Os12g0209100 Oryza sativa ssp. japonica HOM05D005262 ORTHO05D006590 4.1e-60 235.0 153 73.9
Gohir.A05G412300 Gossypium hirsutum HOM05D005262 ORTHO05D006590 1.2e-59 233.4 159 74.8
arahy.Tifrunner.gnm1.ann1.XG4VM3 Arachis hypogaea HOM05D005262 ORTHO05D006590 2.0e-59 232.6 156 73.7
arahy.Tifrunner.gnm1.ann1.EK09V6 Arachis hypogaea HOM05D005262 ORTHO05D006590 2.7e-59 232.3 156 73.7
Migut.O00263 Erythranthe guttata HOM05D005262 ORTHO05D006590 2.7e-59 232.3 153 75.2
Glyma.01G052200 Glycine max HOM05D005262 ORTHO05D006590 2.7e-59 232.3 155 74.8
CANSAT80G0446 Cannabis sativa HOM05D005262 ORTHO05D006590 3.5e-59 231.9 144 75.7
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 3.5e-59 231.9 158 71.5
FAN26G2856 Fragaria x ananassa HOM05D005262 ORTHO05D006590 3.5e-59 231.9 157 72.6
SGA_v2.0_scaffold25G10746 Striga asiatica HOM05D005262 ORTHO05D006590 3.5e-59 231.9 157 72.0
Glyma.02G110400 Glycine max HOM05D005262 ORTHO05D006590 7.7e-59 230.7 159 72.3
Lj2g0009005 Lotus japonicus HOM05D005262 ORTHO05D006590 1.0e-58 230.3 159 70.4
AUR62032822 Chenopodium quinoa HOM05D005262 ORTHO05D006590 1.7e-58 229.6 158 71.5
Potri.010G165500 Populus trichocarpa HOM05D005262 ORTHO05D006590 1.7e-58 229.6 152 75.0
FAN19G1549 Fragaria x ananassa HOM05D005262 ORTHO05D006590 2.3e-58 229.2 157 72.6
Ca_02973_v3 Cicer arietinum L. HOM05D005262 ORTHO05D006590 2.9e-58 228.8 159 71.7
FAN23G1362 Fragaria x ananassa HOM05D005262 ORTHO05D006590 3.8e-58 228.4 157 72.6
Gohir.A10G054500 Gossypium hirsutum HOM05D005262 ORTHO05D006590 5.0e-58 228.0 156 75.6
SGA_v2.0_scaffold90G27753 Striga asiatica HOM05D005262 ORTHO05D006590 5.0e-58 228.0 157 72.6
MSTRG.11557 Avicennia marina HOM05D005262 ORTHO05D006590 6.6e-58 227.6 157 72.6
FvH4_1g30250 Fragaria vesca HOM05D005262 ORTHO05D006590 2.5e-57 225.7 156 71.8
DCAR_013139 Daucus carota HOM05D005262 ORTHO05D006590 3.3e-57 225.3 157 70.1
COL.COLO4_28415 Corchorus olitorius HOM05D005262 ORTHO05D006590 4.2e-57 224.9 150 75.3
Manes.01G033800 Manihot esculenta HOM05D005262 ORTHO05D006590 4.2e-57 224.9 159 70.4
HanXRQChr17g0545311 Helianthus annuus HOM05D005262 ORTHO05D006590 5.5e-57 224.6 155 71.6
Lalb_Chr12g0202851 Lupinus albus HOM05D005262 ORTHO05D006590 5.5e-57 224.6 159 69.8
VMungo1215G2947 Vigna mungo HOM05D005262 ORTHO05D006590 5.5e-57 224.6 159 71.1
Gorai.011G060300 Gossypium raimondii HOM05D005262 ORTHO05D006590 9.5e-57 223.8 156 73.7
TPR.G4647 Trifolium pratense HOM05D005262 ORTHO05D006590 1.2e-56 223.4 159 69.2
Psat1g094200 Pisum sativum HOM05D005262 ORTHO05D006590 2.8e-56 222.2 159 69.8
Phvul.003G046600 Phaseolus vulgaris HOM05D005262 ORTHO05D006590 6.1e-56 221.1 160 71.9
Lsat_1_v5_gn_3_51960 Lactuca sativa HOM05D005262 ORTHO05D006590 1.0e-55 220.3 158 67.7
Sabra10G0125800 Salix brachista HOM05D005262 ORTHO05D006590 1.4e-55 219.9 176 66.5
ATR0810G029 Amborella trichopoda HOM05D005262 ORTHO05D006590 4.0e-55 218.4 158 69.6
EL10Ac8g18975 Beta vulgaris HOM05D005262 ORTHO05D006590 6.8e-55 217.6 154 69.5
Zm00001eb163570 Zea mays HOM05D005262 ORTHO05D006590 2.0e-54 216.1 153 69.3
Nn4g23238 Nelumbo nucifera HOM05D005262 ORTHO05D006590 5.7e-54 214.5 123 84.6
Medtr8g006800 Medicago truncatula HOM05D005262 ORTHO05D006590 4.1e-52 208.4 159 64.8
Medtr2g087760 Medicago truncatula HOM05D005262 ORTHO05D006590 2.0e-51 206.1 159 64.8
unitig_749.g14151 Utricularia gibba HOM05D005262 ORTHO05D006590 3.9e-50 201.8 149 63.8
SalBow6G1526 Salvia bowleyana HOM05D005262 ORTHO05D006590 1.6e-48 196.4 153 62.7
SEGI_18406 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 1.6e-48 196.4 153 62.1
CDE02G1435 Ceratophyllum demersum HOM05D005262 ORTHO05D006590 2.1e-48 196.1 159 62.9
vmacro10351 Vaccinium macrocarpon HOM05D005262 ORTHO05D006590 4.4e-46 188.3 141 72.3
THA.LOC104818198 Tarenaya hassleriana HOM05D005262 ORTHO05D006590 7.5e-46 187.6 157 54.8
Eucgr.L00661 Eucalyptus grandis HOM05D005262 ORTHO05D006590 1.1e-44 183.7 114 82.5
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 3.2e-44 182.2 162 58.0
CAN.G228.3 Capsicum annuum HOM05D005262 ORTHO05D006590 7.0e-44 181.0 120 77.5
Aa31LG7G8380 Aethionema arabicum HOM05D005262 ORTHO05D006590 1.9e-41 172.9 156 53.8
CARHR025210 Cardamine hirsuta HOM05D005262 ORTHO05D006590 1.1e-39 167.2 153 51.6
Carub.0001s2427 Capsella rubella HOM05D005262 ORTHO05D006590 2.3e-39 166.0 156 50.6
Thhalv10008835m.g Eutrema salsugineum HOM05D005262 ORTHO05D006590 6.8e-39 164.5 153 51.6
AL1G38960 Arabidopsis lyrata HOM05D005262 ORTHO05D006590 8.9e-39 164.1 156 50.6
Sp1g22060 Schrenkiella parvula HOM05D005262 ORTHO05D006590 2.2e-37 159.5 156 50.0
AT1G26750 Arabidopsis thaliana HOM05D005262 ORTHO05D006590 8.3e-37 157.5 156 49.4
ClCG08G001930 Citrullus lanatus HOM05D005262 ORTHO05D006590 8.3e-37 157.5 111 73.0
A07p13080 Brassica napus HOM05D005262 ORTHO05D006590 1.7e-34 149.8 153 48.4
BraA07t29079Z Brassica rapa HOM05D005262 ORTHO05D006590 1.5e-33 146.7 153 48.4
BcaC06g35126 Brassica carinata HOM05D005262 ORTHO05D006590 1.2e-32 143.7 153 47.1
BcaB03g14087 Brassica carinata HOM05D005262 ORTHO05D006590 3.6e-32 142.1 153 46.4
C07p19560 Brassica napus HOM05D005262 ORTHO05D006590 3.6e-32 142.1 153 46.4
BolC7t42473H Brassica oleracea HOM05D005262 ORTHO05D006590 3.6e-32 142.1 153 46.4
RcHm_v2.0_Chr6g0271051 Rosa chinensis HOM05D005262 ORTHO05D006590 8.1e-32 141.0 146 56.2
C05p24220 Brassica napus HOM05D005262 ORTHO05D006590 5.2e-31 138.3 153 45.8
A09p40160 Brassica napus HOM05D005262 ORTHO05D006590 3.4e-30 135.6 153 44.4
BraA09t39514Z Brassica rapa HOM05D005262 ORTHO05D006590 3.4e-30 135.6 153 44.4
Gohir.D10G056500 Gossypium hirsutum HOM05D005262 ORTHO05D006590 4.9e-29 131.7 111 64.9
Haze_01349 Corylus avellana HOM05D005262 ORTHO05D006590 6.4e-29 131.3 102 68.6
Oeu021067.1 Olea europaea HOM05D005262 ORTHO05D006590 4.1e-28 128.6 78 79.5
BolC5t31158H Brassica oleracea HOM05D005262 ORTHO05D006590 2.7e-27 125.9 119 52.1
RcHm_v2.0_Chr7g0220341 Rosa chinensis HOM05D005262 ORTHO05D006590 4.6e-27 125.2 84 73.8
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 1.7e-26 123.2 80 77.5
BcaC05g26391 Brassica carinata HOM05D005262 ORTHO05D006590 2.8e-24 115.9 132 45.5
SEGI_29332 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 8.1e-24 114.4 87 64.4
SEGI_36558 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 4.2e-20 102.1 76 64.5
SEGI_23137 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 5.4e-20 101.7 81 63.0
SEGI_39727 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 1.2e-19 100.5 76 63.2
SHI20784 Sapria himalayana HOM05D005262 ORTHO05D006590 5.1e-18 95.1 97 54.6
Eucgr.L00657 Eucalyptus grandis HOM05D005262 ORTHO05D006590 7.6e-14 81.3 92 54.3
FAN15G0396 Fragaria x ananassa HOM05D005262 ORTHO05D006590 4.9e-13 78.6 66 63.6
CBR_g30169 Chara braunii HOM05D005262 ORTHO05D006590 1.4e-12 77.0 129 33.3
AagrBONN_evm.TU.Sc2ySwM_228.1458 Anthoceros agrestis HOM05D005262 ORTHO05D006590 6.6e-10 68.2 120 35.8
Pp3c14_7320 Physcomitrium patens HOM05D005262 ORTHO05D006590 1.5e-09 67.0 122 33.6
Glyma.11G251200 Glycine max HOM05D005262 ORTHO05D006590 6.2e-08 61.6 44 61.4
Mapoly0001s0053 Marchantia polymorpha HOM05D005262 ORTHO05D006590 5.3e-07 58.5 90 34.4


User provided reference genes

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