Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p004892 Quercus lobata HOM05D005891 ORTHO05D007214 0.0e+00 1505.7 745 100.0
Haze_19761 Corylus avellana HOM05D005891 ORTHO05D007214 1.4e-307 1059.3 747 73.6
CiPaw.09G043200 Carya illinoinensis HOM05D005891 ORTHO05D007214 1.0e-294 1016.5 745 71.0
Atru.chr11.2650 Acer truncatum HOM05D005891 ORTHO05D007214 2.8e-244 849.0 769 58.1
Prupe.4G274500 Prunus persica HOM05D005891 ORTHO05D007214 1.1e-243 847.0 748 60.3
Cfa016743 Carpinus fangiana HOM05D005891 ORTHO05D007214 7.4e-237 824.3 559 76.0
Potri.006G044500 Populus trichocarpa HOM05D005891 ORTHO05D007214 1.7e-236 823.2 751 58.3
MD14G1081800 Malus domestica HOM05D005891 ORTHO05D007214 2.8e-236 822.4 750 59.1
Manes.09G010000 Manihot esculenta HOM05D005891 ORTHO05D007214 8.2e-236 820.8 745 59.5
MD12G1089200 Malus domestica HOM05D005891 ORTHO05D007214 2.4e-235 819.3 747 58.6
Thecc.04G215900 Theobroma cacao HOM05D005891 ORTHO05D007214 5.9e-234 814.7 747 58.2
CANSAT80G2643 Cannabis sativa HOM05D005891 ORTHO05D007214 6.5e-233 811.2 746 56.4
Dinv14832 Davidia involucrata HOM05D005891 ORTHO05D007214 6.5e-233 811.2 680 61.6
FAN05G1661 Fragaria x ananassa HOM05D005891 ORTHO05D007214 1.1e-232 810.4 754 57.4
FvH4_6g24900 Fragaria vesca HOM05D005891 ORTHO05D007214 4.2e-232 808.5 752 57.7
COL.COLO4_20863 Corchorus olitorius HOM05D005891 ORTHO05D007214 7.2e-232 807.7 746 57.5
FAN14G5310 Fragaria x ananassa HOM05D005891 ORTHO05D007214 1.6e-231 806.6 754 57.4
TAR633G2073 Trochodendron aralioides HOM05D005891 ORTHO05D007214 3.9e-230 802.0 746 57.1
RcHm_v2.0_Chr2g0124601 Rosa chinensis HOM05D005891 ORTHO05D007214 1.1e-229 800.4 751 56.9
Gorai.006G219000 Gossypium raimondii HOM05D005891 ORTHO05D007214 2.0e-229 799.7 745 56.6
Lj1g0021626 Lotus japonicus HOM05D005891 ORTHO05D007214 5.3e-227 791.6 748 55.7
Gohir.A09G201700 Gossypium hirsutum HOM05D005891 ORTHO05D007214 2.0e-226 789.6 745 56.2
Actinidia39186 Actinidia chinensis HOM05D005891 ORTHO05D007214 2.6e-226 789.3 751 55.7
Glyma.18G212600 Glycine max HOM05D005891 ORTHO05D007214 7.7e-226 787.7 748 55.2
Lalb_Chr20g0110281 Lupinus albus HOM05D005891 ORTHO05D007214 7.7e-226 787.7 749 56.1
TWI53G1500 Tripterygium wilfordii HOM05D005891 ORTHO05D007214 1.0e-225 787.3 746 55.2
Glyma.03G131800 Glycine max HOM05D005891 ORTHO05D007214 1.5e-224 783.5 749 55.5
Medtr7g090600 Medicago truncatula HOM05D005891 ORTHO05D007214 5.5e-224 781.6 747 55.2
Ca_08420_v3 Cicer arietinum L. HOM05D005891 ORTHO05D007214 4.7e-223 778.5 745 54.9
Duzib212G0478 Durio zibethinus HOM05D005891 ORTHO05D007214 2.3e-222 776.2 747 56.2
TPR.G32752 Trifolium pratense HOM05D005891 ORTHO05D007214 1.2e-221 773.9 747 54.2
Sabra06G0030700 Salix brachista HOM05D005891 ORTHO05D007214 2.2e-220 769.6 716 57.8
CANSAT80G2523 Cannabis sativa HOM05D005891 ORTHO05D007214 2.4e-219 766.1 746 54.6
Phvul.001G127800 Phaseolus vulgaris HOM05D005891 ORTHO05D007214 5.0e-217 758.4 749 54.1
Rhsim03G0031400 Rhododendron simsii HOM05D005891 ORTHO05D007214 3.6e-215 752.3 742 53.6
Hma1.2p1_0275F.1_g110840 Hydrangea macrophylla HOM05D005891 ORTHO05D007214 1.4e-211 740.3 688 55.7
Aqoxy7G02967 Aquilegia oxysepala HOM05D005891 ORTHO05D007214 5.2e-206 721.8 751 52.7
ClCG04G004100 Citrullus lanatus HOM05D005891 ORTHO05D007214 8.8e-206 721.1 751 53.3
Duzib151G0628 Durio zibethinus HOM05D005891 ORTHO05D007214 1.2e-205 720.7 743 53.8
Solyc04g017700.4 Solanum lycopersicum HOM05D005891 ORTHO05D007214 2.4e-203 713.0 747 51.4
Ciclev10025261m.g Citrus clementina HOM05D005891 ORTHO05D007214 7.0e-203 711.4 557 64.5
Nitab4.5_0008674g0030 Nicotiana tabacum HOM05D005891 ORTHO05D007214 3.8e-201 705.7 747 51.3
CsaV3_4G022060 Cucumis sativus L. HOM05D005891 ORTHO05D007214 7.3e-200 701.4 753 52.1
Nitab4.5_0001618g0090 Nicotiana tabacum HOM05D005891 ORTHO05D007214 6.1e-199 698.4 747 50.1
Ciclev10031083m.g Citrus clementina HOM05D005891 ORTHO05D007214 1.0e-198 697.6 557 63.4
GSVIVG01033562001 Vitis vinifera HOM05D005891 ORTHO05D007214 2.3e-198 696.4 748 51.7
AL5G38660 Arabidopsis lyrata HOM05D005891 ORTHO05D007214 9.2e-195 684.5 743 48.9
Oeu015292.1 Olea europaea HOM05D005891 ORTHO05D007214 2.0e-194 683.3 679 52.6
Sed0000553 Sechium edule HOM05D005891 ORTHO05D007214 1.0e-193 681.0 748 50.7
Nn7g36464 Nelumbo nucifera HOM05D005891 ORTHO05D007214 7.3e-192 674.9 756 48.8
Cc06_g18470 Coffea canephora HOM05D005891 ORTHO05D007214 9.5e-192 674.5 755 48.9
PGR031G3404 Punica granatum HOM05D005891 ORTHO05D007214 2.8e-191 672.9 752 48.5
CAN.G1237.25 Capsicum annuum HOM05D005891 ORTHO05D007214 6.2e-191 671.8 712 50.3
Sc19g0008430 Simmondsia chinensis HOM05D005891 ORTHO05D007214 8.0e-191 671.4 749 48.7
HanXRQChr17g0536551 Helianthus annuus HOM05D005891 ORTHO05D007214 1.3e-188 664.1 768 48.7
PGSC0003DMG402007625 Solanum tuberosum HOM05D005891 ORTHO05D007214 1.7e-188 663.7 678 51.6
THA.LOC104824423 Tarenaya hassleriana HOM05D005891 ORTHO05D007214 1.7e-188 663.7 747 49.1
A09p50110 Brassica napus HOM05D005891 ORTHO05D007214 2.9e-188 662.9 749 48.1
BraA09t40462Z Brassica rapa HOM05D005891 ORTHO05D007214 2.9e-188 662.9 749 48.1
PSO063G0854 Papaver somniferum HOM05D005891 ORTHO05D007214 2.9e-188 662.9 748 49.2
arahy.Tifrunner.gnm1.ann1.324ZN3 Arachis hypogaea HOM05D005891 ORTHO05D007214 8.3e-188 661.4 814 47.3
BolC8t50864H Brassica oleracea HOM05D005891 ORTHO05D007214 8.3e-188 661.4 748 48.3
BcaC07g40068 Brassica carinata HOM05D005891 ORTHO05D007214 2.4e-187 659.8 749 49.0
C08p32480 Brassica napus HOM05D005891 ORTHO05D007214 2.4e-187 659.8 747 48.1
PSO170G1429 Papaver somniferum HOM05D005891 ORTHO05D007214 1.6e-186 657.1 747 48.5
Sopen04g008780 Solanum pennellii HOM05D005891 ORTHO05D007214 2.0e-186 656.8 677 51.4
arahy.Tifrunner.gnm1.ann1.68N1MV Arachis hypogaea HOM05D005891 ORTHO05D007214 5.0e-185 652.1 803 47.7
Nn2g15043 Nelumbo nucifera HOM05D005891 ORTHO05D007214 6.2e-183 645.2 751 48.1
Lsat_1_v5_gn_3_23040 Lactuca sativa HOM05D005891 ORTHO05D007214 3.1e-182 642.9 756 48.5
Migut.K00113 Erythranthe guttata HOM05D005891 ORTHO05D007214 3.4e-181 639.4 746 48.0
Psat3g075960 Pisum sativum HOM05D005891 ORTHO05D007214 7.5e-181 638.3 561 59.4
MELO3C014212.2 Cucumis melo HOM05D005891 ORTHO05D007214 1.2e-178 630.9 682 52.5
Gohir.D09G195600 Gossypium hirsutum HOM05D005891 ORTHO05D007214 1.2e-178 630.9 577 57.5
EL10Ac3g07174 Beta vulgaris HOM05D005891 ORTHO05D007214 7.3e-176 621.7 744 46.4
BcaC07g40040 Brassica carinata HOM05D005891 ORTHO05D007214 2.1e-175 620.2 711 48.0
Peaxi162Scf00130g01129 Petunia axillaris HOM05D005891 ORTHO05D007214 2.8e-175 619.8 743 47.1
SalBow4G2335 Salvia bowleyana HOM05D005891 ORTHO05D007214 1.1e-174 617.8 757 46.6
Aa31LG10G12080 Aethionema arabicum HOM05D005891 ORTHO05D007214 3.1e-174 616.3 712 49.6
MBI16_g31793_MAGBIO Magnolia biondii HOM05D005891 ORTHO05D007214 3.4e-173 612.8 704 49.1
Hund19119 Selenicereus undatus HOM05D005891 ORTHO05D007214 1.4e-171 607.4 810 44.1
SalBow1G2481 Salvia bowleyana HOM05D005891 ORTHO05D007214 7.8e-170 601.7 766 46.0
DCAR_002883 Daucus carota HOM05D005891 ORTHO05D007214 3.9e-169 599.4 682 48.2
Ah.13g076700 Amaranthus hybridus HOM05D005891 ORTHO05D007214 5.6e-168 595.5 753 45.0
ATR0580G208 Amborella trichopoda HOM05D005891 ORTHO05D007214 1.2e-167 594.3 752 46.3
Sp5g05400 Schrenkiella parvula HOM05D005891 ORTHO05D007214 2.1e-159 567.0 556 52.5
ECA246G3700 Erigeron canadensis HOM05D005891 ORTHO05D007214 5.3e-158 562.4 626 49.8
AUR62026144 Chenopodium quinoa HOM05D005891 ORTHO05D007214 6.9e-158 562.0 719 46.0
Thhalv10005871m.g Eutrema salsugineum HOM05D005891 ORTHO05D007214 6.9e-158 562.0 558 52.5
FAN02G2450 Fragaria x ananassa HOM05D005891 ORTHO05D007214 6.9e-158 562.0 511 57.7
Carub.0005s2399 Capsella rubella HOM05D005891 ORTHO05D007214 2.0e-157 560.5 558 53.4
AUR62030390 Chenopodium quinoa HOM05D005891 ORTHO05D007214 3.4e-157 559.7 714 46.6
CARHR119890 Cardamine hirsuta HOM05D005891 ORTHO05D007214 2.9e-156 556.6 558 52.3
AT3G57170 Arabidopsis thaliana HOM05D005891 ORTHO05D007214 7.1e-155 552.0 557 51.7
Eucgr.A02290 Eucalyptus grandis HOM05D005891 ORTHO05D007214 8.1e-151 538.5 560 52.5
Zm00001eb364590 Zea mays HOM05D005891 ORTHO05D007214 7.1e-139 498.8 770 37.7
Actinidia09292 Actinidia chinensis HOM05D005891 ORTHO05D007214 1.3e-132 478.0 762 40.0
SGA_v2.0_scaffold94G28504 Striga asiatica HOM05D005891 ORTHO05D007214 1.3e-132 478.0 762 39.2
MD07G1151600 Malus domestica HOM05D005891 ORTHO05D007214 1.1e-131 474.9 509 53.2
HPP92_010949 Vanilla planifolia HOM05D005891 ORTHO05D007214 1.2e-130 471.5 726 39.3
CDE08G1332 Ceratophyllum demersum HOM05D005891 ORTHO05D007214 2.7e-130 470.3 698 42.0
Lj5A499T12 Lonicera japonica HOM05D005891 ORTHO05D007214 1.0e-129 468.4 446 56.5
vmacro21952 Vaccinium macrocarpon HOM05D005891 ORTHO05D007214 3.4e-125 453.4 454 53.5
VMungo1383G0485 Vigna mungo HOM05D005891 ORTHO05D007214 6.5e-124 449.1 396 59.3
SEGI_09087 Sequoiadendron giganteum HOM05D005891 ORTHO05D007214 1.6e-106 391.3 633 39.5
vmacro20338 Vaccinium macrocarpon HOM05D005891 ORTHO05D007214 1.8e-102 377.9 650 39.5
unitig_748.g7229 Utricularia gibba HOM05D005891 ORTHO05D007214 7.8e-85 319.3 401 46.1
Prupe.5G000500 Prunus persica HOM05D005891 ORTHO05D007214 3.2e-78 297.4 228 67.5
Pp3c24_1230 Physcomitrium patens HOM05D005891 ORTHO05D007214 2.5e-75 287.7 769 29.4
AagrBONN_evm.TU.Sc2ySwM_117.2192 Anthoceros agrestis HOM05D005891 ORTHO05D007214 1.5e-67 261.9 782 30.2
Mapoly0019s0088 Marchantia polymorpha HOM05D005891 ORTHO05D007214 3.4e-64 250.8 651 30.6
Ciclev10013765m.g Citrus clementina HOM05D005891 ORTHO05D007214 2.2e-63 248.1 255 54.5
FAN05G3805 Fragaria x ananassa HOM05D005891 ORTHO05D007214 3.2e-62 244.2 203 62.6
QL07p005099 Quercus lobata HOM05D005891 ORTHO05D007214 3.9e-60 237.3 140 87.1
VMungo1383G2003 Vigna mungo HOM05D005891 ORTHO05D007214 7.3e-59 233.0 296 45.3
SMO367G0314 Selaginella moellendorffii HOM05D005891 ORTHO05D007214 3.0e-52 211.1 565 29.6
Os05g0290300 Oryza sativa ssp. japonica HOM05D005891 ORTHO05D007214 6.2e-50 203.4 208 49.5
MD07G1151500 Malus domestica HOM05D005891 ORTHO05D007214 1.1e-49 202.6 229 53.7
Cpa.g.sc66.74 Carica papaya HOM05D005891 ORTHO05D007214 1.3e-47 195.7 147 66.7
CBR_g4216 Chara braunii HOM05D000019 ORTHO05D000048 2.3e-36 158.3 291 35.7
Lj5C499G2 Lonicera japonica HOM05D005891 ORTHO05D007214 5.6e-35 153.7 211 45.5
Glyma.19G133702 Glycine max HOM05D005891 ORTHO05D007214 1.8e-33 148.7 267 36.7
TWI74G1459 Tripterygium wilfordii HOM05D005891 ORTHO05D007214 1.7e-31 142.1 152 50.0
CSS0027694 Camellia sinensis var. sinensis HOM05D005891 ORTHO05D007214 1.7e-23 115.5 96 56.2
FAN02G2483 Fragaria x ananassa HOM05D005891 ORTHO05D007214 8.7e-20 103.2 85 54.1
Actinidia39189 Actinidia chinensis HOM05D005891 ORTHO05D007214 9.7e-19 99.8 104 48.1
C04p35350 Brassica napus HOM05D005891 ORTHO05D032421 2.8e-18 98.2 248 33.1
BolC4t25089H Brassica oleracea HOM05D005891 ORTHO05D032421 2.8e-18 98.2 248 33.1
Cfa022822 Carpinus fangiana HOM05D005891 ORTHO05D007214 5.0e-15 87.4 364 25.8
Actinidia39187 Actinidia chinensis HOM05D005891 ORTHO05D007214 1.1e-11 76.3 67 52.2
BcaC02g09903 Brassica carinata HOM05D005891 ORTHO05D032421 2.5e-11 75.1 92 42.4
Cpa.g.sc66.72 Carica papaya HOM05D005891 ORTHO05D007214 2.8e-10 71.6 93 41.9
BcaB05g24338 Brassica carinata HOM05D005891 ORTHO05D007214 5.5e-06 57.4 66 51.5


User provided reference genes

Program Settings