Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p004579 Quercus lobata HOM05D007529 ORTHO05D007451 1.4e-153 546.2 259 100.0
Dinv30288 Davidia involucrata HOM05D007529 ORTHO05D007451 5.4e-86 321.6 250 62.4
Atru.chr1.1251 Acer truncatum HOM05D007529 ORTHO05D007451 7.8e-85 317.8 247 63.2
Haze_19755 Corylus avellana HOM05D007529 ORTHO05D007451 1.1e-83 313.9 223 70.9
Prupe.7G049500 Prunus persica HOM05D007529 ORTHO05D007451 1.9e-83 313.2 255 62.4
Potri.006G044801 Populus trichocarpa HOM05D007529 ORTHO05D007451 4.3e-83 312.0 262 59.9
Cfa016748 Carpinus fangiana HOM05D002613 ORTHO05D003140 7.3e-83 311.2 226 69.0
TWI74G0965 Tripterygium wilfordii HOM05D007529 ORTHO05D007451 4.0e-81 305.4 248 60.5
MD14G1081300 Malus domestica HOM05D007529 ORTHO05D007451 4.5e-80 302.0 249 60.6
Lalb_Chr02g0156441 Lupinus albus HOM05D007529 ORTHO05D007451 4.9e-79 298.5 260 58.5
Glyma.02G191900 Glycine max HOM05D007529 ORTHO05D007451 3.5e-77 292.4 249 57.4
Manes.09G016732 Manihot esculenta HOM05D007529 ORTHO05D007451 6.0e-77 291.6 251 58.2
Manes.09G016600 Manihot esculenta HOM05D007529 ORTHO05D007451 1.0e-76 290.8 251 58.2
Eucgr.K01581 Eucalyptus grandis HOM05D007529 ORTHO05D007451 3.9e-76 288.9 238 55.5
Migut.K00115 Erythranthe guttata HOM05D007529 ORTHO05D007451 4.3e-75 285.4 251 55.0
Medtr1g041810 Medicago truncatula HOM05D007529 ORTHO05D007451 1.3e-74 283.9 259 56.8
SalBow1G4167 Salvia bowleyana HOM05D007529 ORTHO05D007451 2.8e-74 282.7 256 55.9
RcHm_v2.0_Chr3g0484581 Rosa chinensis HOM05D007529 ORTHO05D007451 3.7e-74 282.3 243 58.0
Ca_23805_v3 Cicer arietinum L. HOM05D007529 ORTHO05D007451 4.8e-74 282.0 249 55.8
FvH4_6g24810 Fragaria vesca HOM05D007529 ORTHO05D007451 8.1e-74 281.2 249 55.8
ClCG04G003960 Citrullus lanatus HOM05D007529 ORTHO05D007451 6.9e-73 278.1 271 50.9
Lsat_1_v5_gn_5_161020 Lactuca sativa HOM05D007529 ORTHO05D007451 9.0e-73 277.7 256 55.9
Nn2g15054 Nelumbo nucifera HOM05D007529 ORTHO05D007451 1.2e-72 277.3 257 53.7
Nitab4.5_0011420g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 1.5e-72 276.9 264 50.4
PGR142G2784 Punica granatum HOM05D007529 ORTHO05D007451 1.5e-72 276.9 258 56.2
CANSAT80G1192 Cannabis sativa HOM05D007529 ORTHO05D007451 7.6e-72 274.6 254 56.7
Sabra06G0031000 Salix brachista HOM05D005255 ORTHO05D006276 2.2e-71 273.1 241 55.6
TPR.G19652 Trifolium pratense HOM05D007529 ORTHO05D007451 2.2e-71 273.1 257 55.6
Gohir.A01G193700 Gossypium hirsutum HOM05D007529 ORTHO05D007451 2.9e-71 272.7 248 54.4
CANSAT80G2089 Cannabis sativa HOM05D007529 ORTHO05D007451 3.8e-71 272.3 250 56.8
ECA248G1753 Erigeron canadensis HOM05D007529 ORTHO05D007451 8.4e-71 271.2 251 53.4
Nitab4.5_0001618g0110 Nicotiana tabacum HOM05D007529 ORTHO05D007451 1.1e-70 270.8 253 51.0
Gorai.002G227400 Gossypium raimondii HOM05D007529 ORTHO05D007451 4.2e-70 268.9 248 54.0
COL.COLO4_30902 Corchorus olitorius HOM05D007529 ORTHO05D007451 7.1e-70 268.1 254 52.8
Sed0023165 Sechium edule HOM05D007529 ORTHO05D007451 2.1e-69 266.5 259 51.7
Actinidia38146 Actinidia chinensis HOM05D000001 ORTHO05D009995 2.7e-69 266.2 247 56.7
CsaV3_4G021910 Cucumis sativus L. HOM05D007529 ORTHO05D007451 1.3e-68 263.8 268 49.3
Gohir.D01G183900 Gossypium hirsutum HOM05D007529 ORTHO05D007451 1.8e-68 263.5 248 53.2
HanXRQChr17g0545881 Helianthus annuus HOM05D007529 ORTHO05D007451 3.0e-68 262.7 256 52.0
Potri.004G076800 Populus trichocarpa HOM05D007529 ORTHO05D007451 3.9e-68 262.3 261 53.3
Sc19g0008410 Simmondsia chinensis HOM05D007529 ORTHO05D007451 3.3e-67 259.2 252 53.2
Peaxi162Scf00130g00112 Petunia axillaris HOM05D007529 ORTHO05D007451 4.3e-67 258.8 244 52.5
FAN17G0712 Fragaria x ananassa HOM05D007529 ORTHO05D007451 1.6e-66 256.9 249 51.0
FvH4_4g15460 Fragaria vesca HOM05D007529 ORTHO05D007451 4.8e-66 255.4 252 52.0
MBI19_g17527_MAGBIO Magnolia biondii HOM05D007529 ORTHO05D007451 4.8e-66 255.4 249 52.2
FAN12G3128 Fragaria x ananassa HOM05D007529 ORTHO05D007451 1.1e-65 254.2 252 52.0
VMungo0720G2145 Vigna mungo HOM05D007529 ORTHO05D007451 1.1e-65 254.2 248 51.6
FAN22G0252 Fragaria x ananassa HOM05D007529 ORTHO05D007451 5.3e-65 251.9 249 50.6
MELO3C014209.2 Cucumis melo HOM05D007529 ORTHO05D007451 9.0e-65 251.1 260 48.1
HanXRQChr01g0008291 Helianthus annuus HOM05D007529 ORTHO05D007451 9.0e-65 251.1 254 50.8
FAN14G0143 Fragaria x ananassa HOM05D007529 ORTHO05D007451 1.5e-64 250.4 229 54.1
Solyc04g017670.3 Solanum lycopersicum HOM05D007529 ORTHO05D007451 2.6e-64 249.6 263 47.5
Sopen04g008750 Solanum pennellii HOM05D007529 ORTHO05D007451 7.6e-64 248.1 273 45.8
Haze_19770 Corylus avellana HOM05D007529 ORTHO05D007451 1.1e-62 244.2 167 74.9
FAN22G0851 Fragaria x ananassa HOM05D007529 ORTHO05D007451 9.3e-62 241.1 242 50.4
Ciclev10006854m.g Citrus clementina HOM05D007529 ORTHO05D007451 2.3e-60 236.5 247 53.0
AUR62030393 Chenopodium quinoa HOM05D007529 ORTHO05D007451 3.0e-60 236.1 253 47.0
EL10Ac3g07171 Beta vulgaris HOM05D007529 ORTHO05D007451 9.7e-59 231.1 257 47.5
PSO384G2280 Papaver somniferum HOM05D007529 ORTHO05D007451 3.7e-58 229.2 267 43.4
Cc06_g18420 Coffea canephora HOM05D007529 ORTHO05D007451 1.1e-57 227.6 253 47.0
CiPaw.09G042800 Carya illinoinensis HOM05D007529 ORTHO05D007451 2.4e-57 226.5 261 52.5
FAN07G2804 Fragaria x ananassa HOM05D007529 ORTHO05D007451 3.8e-55 219.2 226 49.6
Ah.13g076730 Amaranthus hybridus HOM05D007529 ORTHO05D007451 1.4e-54 217.2 247 44.5
Phvul.007G249000 Phaseolus vulgaris HOM05D007529 ORTHO05D007451 1.9e-54 216.9 213 49.8
Oeu008184.2 Olea europaea HOM05D005255 ORTHO05D006276 6.7e-52 208.4 208 52.9
DCAR_013619 Daucus carota HOM05D007529 ORTHO05D007451 2.0e-48 196.8 262 45.0
FvH4_4g15570 Fragaria vesca HOM05D007529 ORTHO05D007451 1.0e-47 194.5 182 51.6
SGA_v2.0_scaffold21G09330 Striga asiatica HOM05D007529 ORTHO05D007451 1.7e-47 193.7 251 42.6
Sabra04G0050900 Salix brachista HOM05D007529 ORTHO05D007451 2.9e-47 193.0 228 45.2
FvH4_2g38461 Fragaria vesca HOM05D007529 ORTHO05D007451 1.9e-46 190.3 184 53.8
Nn1g04791 Nelumbo nucifera HOM05D007529 ORTHO05D007451 3.9e-44 182.6 247 40.9
Nitab4.5_0005195g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 5.7e-43 178.7 264 39.4
Aqoxy7G01198 Aquilegia oxysepala HOM05D007529 ORTHO05D007451 4.1e-41 172.6 219 40.6
THA.LOC104816403 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 5.3e-41 172.2 255 38.0
Potri.004G077301 Populus trichocarpa HOM05D007529 ORTHO05D007451 6.5e-39 165.2 159 52.8
THA.LOC104825175 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 7.2e-38 161.8 250 38.4
HPP92_011341 Vanilla planifolia HOM05D007529 ORTHO05D007451 9.4e-38 161.4 254 38.6
Nitab4.5_0000826g0010 Nicotiana tabacum HOM05D007529 ORTHO05D007451 3.0e-36 156.4 161 48.4
unitig_899.g15088 Utricularia gibba HOM05D007529 ORTHO05D007451 1.8e-33 147.1 198 41.4
CARHR209270 Cardamine hirsuta HOM05D005503 ORTHO05D007451 3.8e-31 139.4 252 35.7
arahy.Tifrunner.gnm1.ann1.5P9T4R Arachis hypogaea HOM05D007529 ORTHO05D007451 2.5e-30 136.7 125 52.8
AT5G04010 Arabidopsis thaliana HOM05D005503 ORTHO05D007451 2.7e-29 133.3 251 35.5
FAN12G3498 Fragaria x ananassa HOM05D007529 ORTHO05D007451 8.0e-29 131.7 160 45.0
Carub.0006s0294 Capsella rubella HOM05D005503 ORTHO05D007451 1.0e-28 131.3 252 34.5
Psat6g093280 Pisum sativum HOM05D007529 ORTHO05D007451 6.8e-28 128.6 150 48.7
Aa31LG6G5380 Aethionema arabicum HOM05D005503 ORTHO05D007451 1.5e-27 127.5 251 33.5
AL6G13600 Arabidopsis lyrata HOM05D005503 ORTHO05D007451 2.6e-27 126.7 252 34.1
AUR62026141 Chenopodium quinoa HOM05D007529 ORTHO05D007451 1.7e-26 124.0 133 45.9
Nn1g01084 Nelumbo nucifera HOM05D007529 ORTHO05D007451 3.7e-26 122.9 110 55.5
FvH4_4g15602 Fragaria vesca HOM05D007529 ORTHO05D007451 4.8e-26 122.5 161 43.5
Thhalv10027472m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 2.2e-23 113.6 254 31.1
CDE11G0566 Ceratophyllum demersum HOM05D007529 ORTHO05D007451 3.8e-23 112.8 167 35.3
HPP92_011264 Vanilla planifolia HOM05D007529 ORTHO05D007451 5.0e-23 112.5 172 36.0
Zm00001eb150670 Zea mays HOM05D007529 ORTHO05D007451 6.5e-23 112.1 269 31.6
BcaC02g08721 Brassica carinata HOM05D005503 ORTHO05D007451 1.9e-22 110.5 250 30.8
Thhalv10015674m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 2.5e-22 110.2 251 31.5
Thhalv10027188m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 4.2e-22 109.4 250 31.6
C04p51340 Brassica napus HOM05D005503 ORTHO05D007451 2.1e-21 107.1 249 30.5
THA.LOC104825174 Tarenaya hassleriana HOM05D007529 ORTHO05D007451 6.1e-21 105.5 144 36.8
Thhalv10023018m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 8.0e-21 105.1 252 30.2
C08p39580 Brassica napus HOM05D005503 ORTHO05D007451 1.4e-20 104.4 250 30.4
BolC4t26724H Brassica oleracea HOM05D005503 ORTHO05D007451 1.4e-20 104.4 250 30.4
Thhalv10015413m.g Eutrema salsugineum HOM05D005503 ORTHO05D007451 1.4e-20 104.4 251 30.3
FAN17G2871 Fragaria x ananassa HOM05D007529 ORTHO05D011815 2.3e-20 103.6 98 50.0
BcaC07g40964 Brassica carinata HOM05D005503 ORTHO05D007451 6.8e-20 102.1 250 30.0
A09p56430 Brassica napus HOM05D005503 ORTHO05D007451 6.8e-20 102.1 250 30.4
BraA09t41037Z Brassica rapa HOM05D005503 ORTHO05D007451 6.8e-20 102.1 250 30.4
C08p39400 Brassica napus HOM05D005503 ORTHO05D007451 1.2e-19 101.3 250 30.4
FAN22G2112 Fragaria x ananassa HOM05D007529 ORTHO05D007451 4.4e-19 99.4 93 52.7
A09p56630 Brassica napus HOM05D005503 ORTHO05D007451 5.7e-19 99.0 250 29.6
BraA09t41054Z Brassica rapa HOM05D005503 ORTHO05D007451 5.7e-19 99.0 250 29.6
Sp6g38750 Schrenkiella parvula HOM05D005503 ORTHO05D007451 5.7e-19 99.0 256 30.9
Os01g0800900 Oryza sativa ssp. japonica HOM05D007529 ORTHO05D007451 7.5e-19 98.6 264 31.1
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 4.8e-18 95.9 231 31.6
BcaC07g40948 Brassica carinata HOM05D005503 ORTHO05D007451 1.8e-17 94.0 250 30.0
BolC8t51514H Brassica oleracea HOM05D005503 ORTHO05D007451 1.8e-17 94.0 250 30.0
SEGI_22599 Sequoiadendron giganteum HOM05D007529 ORTHO05D007451 7.0e-17 92.0 255 29.8
Aa31LG6G5360 Aethionema arabicum HOM05D005503 ORTHO05D007451 9.1e-17 91.7 276 29.3
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 9.1e-17 91.7 191 32.5
CsaV3_4G021970 Cucumis sativus L. HOM05D007529 ORTHO05D007451 2.0e-16 90.5 88 51.1
MELO3C014210.2 Cucumis melo HOM05D007529 ORTHO05D007451 2.7e-16 90.1 78 53.8
BolC8t51531H Brassica oleracea HOM05D005503 ORTHO05D007451 7.7e-16 88.6 166 33.7
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 1.0e-15 88.2 231 30.7
ClCG04G003940 Citrullus lanatus HOM05D007529 ORTHO05D007451 2.3e-15 87.0 78 52.6
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 1.1e-14 84.7 157 33.1
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 1.1e-14 84.7 231 30.3
Cpa.g.sc5.218 Carica papaya HOM05D007529 ORTHO05D007451 9.5e-14 81.6 65 53.8
FAN17G0844 Fragaria x ananassa HOM05D007529 ORTHO05D007451 1.2e-13 81.3 97 46.4
SMO340G0132 Selaginella moellendorffii HOM05D027965 ORTHO05D007451 1.6e-13 80.9 299 25.8
Cpa.g.sc5.217 Carica papaya HOM05D007529 ORTHO05D007451 8.0e-13 78.6 78 47.4
Carub.0006s0288 Capsella rubella HOM05D021302 ORTHO05D021386 2.6e-11 73.6 175 30.9
AT5G03920 Arabidopsis thaliana HOM05D021302 ORTHO05D021386 4.1e-09 66.2 164 30.5
Gohir.A09G010100 Gossypium hirsutum HOM05D006599 ORTHO05D008304 2.9e-07 60.1 136 31.6
AagrBONN_evm.TU.Sc2ySwM_368.1069 Anthoceros agrestis HOM05D027965 ORTHO05D007451 6.6e-07 58.9 289 22.1
Oeu026328.1 Olea europaea HOM05D000056 ORTHO05D000019 8.6e-07 58.5 69 40.6
Mapoly0033s0082 Marchantia polymorpha HOM05D027965 ORTHO05D048753 1.5e-06 57.8 261 22.6


User provided reference genes

Program Settings