Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p004299 Quercus lobata HOM05D000009 ORTHO05D000008 2.8e-39 165.2 111 100.0
QL03p000889 Quercus lobata HOM05D000009 ORTHO05D000008 2.9e-28 128.6 114 86.0
QL93p0140_0018 Quercus lobata HOM05D000009 ORTHO05D000008 2.9e-28 128.6 114 86.0
QL07p004278 Quercus lobata HOM05D000009 ORTHO05D000008 7.4e-24 114.0 114 79.8
QL07p004202 Quercus lobata HOM05D000009 ORTHO05D000008 3.7e-23 111.7 114 72.8
QL07p004242 Quercus lobata HOM05D000009 ORTHO05D000008 1.1e-14 83.6 104 74.0
QL02p016325 Quercus lobata HOM05D000009 ORTHO05D000008 1.2e-13 80.1 64 62.5
QL07p004092 Quercus lobata HOM05D000009 ORTHO05D000008 4.5e-13 78.2 114 67.5
QL02p047554 Quercus lobata HOM05D000009 ORTHO05D000008 3.8e-12 75.1 65 60.0
Dinv08506 Davidia involucrata HOM05D000009 ORTHO05D000008 1.1e-11 73.6 53 62.3
TWI32G0243 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 1.4e-09 66.6 58 53.4
Haze_19472 Corylus avellana HOM05D005722 ORTHO05D007934 1.8e-09 66.2 58 55.2
QL07p001125 Quercus lobata HOM05D000009 ORTHO05D000008 1.8e-09 66.2 63 55.6
Prupe.7G062500 Prunus persica HOM05D000009 ORTHO05D000008 2.3e-09 65.9 56 53.6
QL07p001265 Quercus lobata HOM05D000009 ORTHO05D000008 3.0e-09 65.5 61 55.7
QL07p001290 Quercus lobata HOM05D000009 ORTHO05D000008 3.0e-09 65.5 62 53.2
Eucgr.A02365 Eucalyptus grandis HOM05D000009 ORTHO05D000008 3.9e-09 65.1 55 54.5
Nitab4.5_0002085g0050 Nicotiana tabacum HOM05D000009 ORTHO05D000008 3.9e-09 65.1 58 55.2
Haze_19816 Corylus avellana HOM05D000009 ORTHO05D020375 5.1e-09 64.7 58 55.2
Haze_19835 Corylus avellana HOM05D000009 ORTHO05D000008 5.1e-09 64.7 58 55.2
Haze_19479 Corylus avellana HOM05D000009 ORTHO05D000008 6.7e-09 64.3 55 54.5
TWI38G2259 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 8.8e-09 63.9 67 50.7
CANSAT80G2453 Cannabis sativa HOM05D000009 ORTHO05D000008 1.1e-08 63.5 59 52.5
Peaxi162Scf00970g00162 Petunia axillaris HOM05D000009 ORTHO05D000008 1.1e-08 63.5 58 55.2
QL08p004928 Quercus lobata HOM05D000009 ORTHO05D000008 1.5e-08 63.2 63 46.0
CiPaw.10G097100 Carya illinoinensis HOM05D000009 ORTHO05D000008 1.9e-08 62.8 63 49.2
TWI38G1123 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 1.9e-08 62.8 66 48.5
CiPaw.10G100600 Carya illinoinensis HOM05D000009 ORTHO05D000008 2.5e-08 62.4 59 50.8
Manes.09G025400 Manihot esculenta HOM05D000009 ORTHO05D000008 2.5e-08 62.4 61 45.9
QL07p000724 Quercus lobata HOM05D000009 ORTHO05D000008 3.3e-08 62.0 57 56.1
TWI38G1842 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 3.3e-08 62.0 64 42.2
Haze_19833 Corylus avellana HOM05D000009 ORTHO05D000008 5.7e-08 61.2 51 58.8
Oeu023036.1 Olea europaea HOM05D000009 ORTHO05D000008 5.7e-08 61.2 57 52.6
PGR004G2410 Punica granatum HOM05D000009 ORTHO05D000008 5.7e-08 61.2 64 43.8
MD14G1069100 Malus domestica HOM05D000009 ORTHO05D000008 7.4e-08 60.8 54 51.9
QL07p001053 Quercus lobata HOM05D000009 ORTHO05D000008 7.4e-08 60.8 58 53.4
QL07p001209 Quercus lobata HOM05D000009 ORTHO05D000008 7.4e-08 60.8 58 53.4
TWI38G0183 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 7.4e-08 60.8 53 47.2
TWI59G1238 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 7.4e-08 60.8 60 48.3
Solyc04g039980.3 Solanum lycopersicum HOM05D000009 ORTHO05D000008 9.7e-08 60.5 58 55.2
Eucgr.K02016 Eucalyptus grandis HOM05D000009 ORTHO05D000008 1.3e-07 60.1 63 47.6
TWI38G0369 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 1.3e-07 60.1 55 45.5
TWI38G1110 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 1.3e-07 60.1 55 45.5
COL.COLO4_21298 Corchorus olitorius HOM05D000009 ORTHO05D000008 1.7e-07 59.7 66 45.5
Eucgr.K02012 Eucalyptus grandis HOM05D000009 ORTHO05D000008 1.7e-07 59.7 61 49.2
QL04p051713 Quercus lobata HOM05D000009 ORTHO05D000008 1.7e-07 59.7 65 52.3
TWI38G1544 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 1.7e-07 59.7 55 43.6
TWI38G1934 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 1.7e-07 59.7 55 43.6
TWI38G1987 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 1.7e-07 59.7 53 47.2
MD14G1070400 Malus domestica HOM05D000009 ORTHO05D000008 2.2e-07 59.3 56 48.2
Phvul.007G254900 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 2.2e-07 59.3 55 52.7
Prupe.7G062200 Prunus persica HOM05D000009 ORTHO05D000008 2.2e-07 59.3 55 50.9
PGR004G0995 Punica granatum HOM05D000009 ORTHO05D000008 2.2e-07 59.3 59 45.8
QL07p000998 Quercus lobata HOM05D000009 ORTHO05D000008 2.2e-07 59.3 57 52.6
QL07p001030 Quercus lobata HOM05D000009 ORTHO05D000008 2.2e-07 59.3 67 52.2
QL07p001235 Quercus lobata HOM05D000009 ORTHO05D000008 2.2e-07 59.3 57 52.6
EL10Ac5g12073 Beta vulgaris HOM05D000009 ORTHO05D000008 2.8e-07 58.9 57 43.9
Dinv01265 Davidia involucrata HOM05D000009 ORTHO05D000008 2.8e-07 58.9 55 47.3
Glyma.11G212800 Glycine max HOM05D000009 ORTHO05D000008 2.8e-07 58.9 59 45.8
Glyma.19G134100 Glycine max HOM05D000009 ORTHO05D000008 2.8e-07 58.9 46 58.7
Glyma.19G135800 Glycine max HOM05D000009 ORTHO05D000008 2.8e-07 58.9 48 56.2
Glyma.19G139950 Glycine max HOM05D000009 ORTHO05D000008 2.8e-07 58.9 53 50.9
MD14G1072300 Malus domestica HOM05D000009 ORTHO05D000008 3.7e-07 58.5 55 47.3
QL07p001350 Quercus lobata HOM05D000009 ORTHO05D000008 3.7e-07 58.5 58 51.7
Medtr5g076840 Medicago truncatula HOM05D000009 ORTHO05D000008 4.8e-07 58.2 52 53.8
Phvul.001G134100 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 4.8e-07 58.2 55 43.6
Phvul.007G254200 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 4.8e-07 58.2 50 54.0
TWI81G1048 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 4.8e-07 58.2 56 48.2
EL10Ac4g07889 Beta vulgaris HOM05D000009 ORTHO05D000008 6.3e-07 57.8 57 43.9
EL10Ac4g07895 Beta vulgaris HOM05D000009 ORTHO05D000008 6.3e-07 57.8 57 43.9
CANSAT80G0041 Cannabis sativa HOM05D000009 ORTHO05D000008 6.3e-07 57.8 56 53.6
CiPaw.10G095400 Carya illinoinensis HOM05D000009 ORTHO05D000008 6.3e-07 57.8 59 49.2
Lj5C466G1 Lonicera japonica HOM05D000009 ORTHO05D000008 6.3e-07 57.8 60 36.7
Lj5C507T2 Lonicera japonica HOM05D000009 ORTHO05D000008 6.3e-07 57.8 60 36.7
QL07p001098 Quercus lobata HOM05D000009 ORTHO05D000008 6.3e-07 57.8 56 51.8
TWI38G1426 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 6.3e-07 57.8 67 46.3
VMungo1383G2883 Vigna mungo HOM05D000009 ORTHO05D000008 6.3e-07 57.8 53 50.9
Dinv06997 Davidia involucrata HOM05D000009 ORTHO05D000008 8.2e-07 57.4 57 49.1
Glyma.19G135500 Glycine max HOM05D000009 ORTHO05D000008 8.2e-07 57.4 58 46.6
Lj5C461T2 Lonicera japonica HOM05D000009 ORTHO05D000008 8.2e-07 57.4 60 36.7
PGR004G1496 Punica granatum HOM05D000009 ORTHO05D000008 8.2e-07 57.4 55 52.7
Thecc.05G253000 Theobroma cacao HOM05D000009 ORTHO05D000008 8.2e-07 57.4 62 51.6
TWI32G1271 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 8.2e-07 57.4 59 47.5
TWI38G1899 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 8.2e-07 57.4 57 49.1
TWI38G2376 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 8.2e-07 57.4 53 45.3
Glyma.02G184300 Glycine max HOM05D000009 ORTHO05D000008 1.1e-06 57.0 60 48.3
Glyma.19G135600 Glycine max HOM05D000009 ORTHO05D000008 1.1e-06 57.0 51 51.0
PGR083G0305 Punica granatum HOM05D000009 ORTHO05D000008 1.1e-06 57.0 62 45.2
QL07p001183 Quercus lobata HOM05D000009 ORTHO05D000008 1.1e-06 57.0 58 50.0
TWI38G0270 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 1.1e-06 57.0 55 45.5
VMungo0720G0680 Vigna mungo HOM05D000009 ORTHO05D000008 1.1e-06 57.0 51 51.0
CANSAT80G1772 Cannabis sativa HOM05D000009 ORTHO05D000008 1.4e-06 56.6 55 54.5
Glyma.19G134300 Glycine max HOM05D000009 ORTHO05D000008 1.4e-06 56.6 50 52.0
CANSAT80G2800 Cannabis sativa HOM05D000009 ORTHO05D000008 1.8e-06 56.2 56 51.8
Dinv01264 Davidia involucrata HOM05D000009 ORTHO05D016233 1.8e-06 56.2 55 47.3
Dinv26589 Davidia involucrata HOM05D000009 ORTHO05D000008 1.8e-06 56.2 54 46.3
Gohir.A03G014146 Gossypium hirsutum HOM05D000009 ORTHO05D000008 1.8e-06 56.2 57 54.4
Phvul.007G254700 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.8e-06 56.2 51 51.0
TWI09G0026 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 1.8e-06 56.2 58 46.6
Dinv02315 Davidia involucrata HOM05D000009 ORTHO05D000008 2.4e-06 55.8 56 46.4
Eucgr.K01715 Eucalyptus grandis HOM05D000009 ORTHO05D000008 2.4e-06 55.8 61 47.5
Hma1.2p1_1048F.1_g251700 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 2.4e-06 55.8 52 51.9
Lalb_Chr20g0110661 Lupinus albus HOM05D000009 ORTHO05D000008 2.4e-06 55.8 50 52.0
Lalb_Chr20g0110671 Lupinus albus HOM05D000009 ORTHO05D000008 2.4e-06 55.8 50 52.0
Medtr7g078640 Medicago truncatula HOM05D000009 ORTHO05D000008 2.4e-06 55.8 55 50.9
Phvul.007G254400 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 2.4e-06 55.8 56 48.2
VMungo1383G0790 Vigna mungo HOM05D000009 ORTHO05D000008 2.4e-06 55.8 55 41.8
Phvul.001G134000 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 3.1e-06 55.5 59 45.8
CANSAT54G1012 Cannabis sativa HOM05D000009 ORTHO05D000008 4.1e-06 55.1 55 50.9
AUR62020496 Chenopodium quinoa HOM05D000009 ORTHO05D000008 4.1e-06 55.1 54 44.4
Ca_08437_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 4.1e-06 55.1 63 38.1
Lj5C460T0 Lonicera japonica HOM05D000009 ORTHO05D000008 4.1e-06 55.1 60 38.3
VMungo0720G2424 Vigna mungo HOM05D000009 ORTHO05D000008 4.1e-06 55.1 48 54.2
VMungo1383G3116 Vigna mungo HOM05D000009 ORTHO05D000008 4.1e-06 55.1 50 48.0
CANSAT80G2750 Cannabis sativa HOM05D000009 ORTHO05D000008 5.3e-06 54.7 55 52.7
CAN.G1237.41 Capsicum annuum HOM05D000009 ORTHO05D000008 5.3e-06 54.7 58 48.3
Ca_05421_v3 Cicer arietinum L. HOM05D000009 ORTHO05D000008 5.3e-06 54.7 62 46.8
Glyma.19G085550 Glycine max HOM05D000009 ORTHO05D000008 5.3e-06 54.7 58 44.8
Glyma.19G085600 Glycine max HOM05D000009 ORTHO05D000008 5.3e-06 54.7 42 59.5
Lj5C462G2 Lonicera japonica HOM05D000009 ORTHO05D000008 5.3e-06 54.7 59 40.7
Medtr4g094540 Medicago truncatula HOM05D000009 ORTHO05D000008 5.3e-06 54.7 61 42.6
Psat6g088040 Pisum sativum HOM05D000009 ORTHO05D000008 5.3e-06 54.7 51 49.0
Prupe.7G062900 Prunus persica HOM05D000009 ORTHO05D000008 5.3e-06 54.7 58 44.8
VMungo1383G1453 Vigna mungo HOM05D000009 ORTHO05D000008 5.3e-06 54.7 63 38.1
Cpa.g.sc92.43 Carica papaya HOM05D000009 ORTHO05D000008 6.9e-06 54.3 56 46.4
Glyma.19G085866 Glycine max HOM05D000009 ORTHO05D012472 6.9e-06 54.3 44 56.8
Medtr4g119195 Medicago truncatula HOM05D000009 ORTHO05D000008 6.9e-06 54.3 44 59.1
Phvul.007G254300 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 6.9e-06 54.3 51 47.1
Thecc.01G139700 Theobroma cacao HOM05D000009 ORTHO05D000008 6.9e-06 54.3 62 41.9
CiPaw.10G097000 Carya illinoinensis HOM05D000009 ORTHO05D000008 9.1e-06 53.9 57 49.1
Glyma.03G135900 Glycine max HOM05D000009 ORTHO05D000008 9.1e-06 53.9 56 44.6
Peaxi162Scf00493g00024 Petunia axillaris HOM05D000009 ORTHO05D000008 9.1e-06 53.9 54 40.7
Peaxi162Scf00493g00116 Petunia axillaris HOM05D000009 ORTHO05D000008 9.1e-06 53.9 54 40.7
TWI81G0469 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 9.1e-06 53.9 56 44.6


User provided reference genes

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