Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 1.3e-152 543.1 288 100.0
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 9.4e-47 191.4 136 70.6
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 6.1e-46 188.7 131 72.5
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 2.8e-35 153.3 130 60.0
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 3.7e-35 152.9 131 57.3
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 1.1e-34 151.4 131 57.3
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 2.7e-33 146.7 129 59.7
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 4.5e-33 146.0 130 59.2
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 7.8e-33 145.2 131 57.3
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 1.3e-32 144.4 126 58.7
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 8.6e-32 141.7 112 61.6
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 4.3e-31 139.4 125 56.8
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 9.5e-31 138.3 129 55.0
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 1.2e-30 137.9 125 54.4
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 1.6e-30 137.5 133 54.1
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 1.6e-30 137.5 129 55.0
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 1.6e-30 137.5 129 57.4
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 1.6e-30 137.5 114 58.8
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 3.6e-30 136.3 124 55.6
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 6.1e-30 135.6 124 55.6
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 8.0e-30 135.2 140 52.9
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 1.0e-29 134.8 131 54.2
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 2.3e-29 133.7 101 65.3
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 2.3e-29 133.7 101 65.3
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 4.0e-29 132.9 108 65.7
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 6.8e-29 132.1 132 50.8
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 6.8e-29 132.1 128 57.0
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 8.9e-29 131.7 141 50.4
Eucgr.A02305 Eucalyptus grandis HOM05D005503 ORTHO05D008949 1.2e-28 131.3 131 53.4
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.2e-28 131.3 101 64.4
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 2.0e-28 130.6 126 53.2
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 2.6e-28 130.2 138 50.7
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 2.6e-28 130.2 134 53.7
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 4.4e-28 129.4 93 66.7
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 4.4e-28 129.4 110 61.8
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 4.4e-28 129.4 101 63.4
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 4.4e-28 129.4 134 53.7
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 4.4e-28 129.4 134 53.7
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 4.4e-28 129.4 129 54.3
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 5.7e-28 129.0 110 61.8
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 5.7e-28 129.0 100 64.0
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 1.3e-27 127.9 129 49.6
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 1.3e-27 127.9 134 50.0
CANSAT80G2315 Cannabis sativa HOM05D005503 ORTHO05D008949 1.7e-27 127.5 128 53.9
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 1.7e-27 127.5 96 64.6
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 3.7e-27 126.3 126 52.4
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 8.3e-27 125.2 131 51.1
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 8.3e-27 125.2 104 61.5
ClCG10G015610 Citrullus lanatus HOM05D005503 ORTHO05D008949 1.4e-26 124.4 85 68.2
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 4.1e-26 122.9 131 49.6
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 7.0e-26 122.1 131 48.9
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 9.2e-26 121.7 122 52.5
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 9.2e-26 121.7 91 67.0
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 4.6e-25 119.4 138 44.9
TWI77G0247 Tripterygium wilfordii HOM05D005503 ORTHO05D008949 1.7e-24 117.5 115 51.3
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 3.9e-24 116.3 124 56.5
Sed0013086 Sechium edule HOM05D005503 ORTHO05D008949 1.5e-23 114.4 96 62.5
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 1.9e-23 114.0 131 46.6
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 1.2e-22 111.3 129 49.6
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 1.6e-22 110.9 135 45.9
DCAR_020514 Daucus carota HOM05D005503 ORTHO05D008949 2.1e-22 110.5 126 50.0
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 2.8e-22 110.2 71 71.8
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 4.7e-22 109.4 106 54.7
ATR0721G098 Amborella trichopoda HOM05D005503 ORTHO05D008949 1.4e-21 107.8 64 76.6
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 1.4e-21 107.8 131 43.5
Sc13g0001540 Simmondsia chinensis HOM05D005503 ORTHO05D008949 1.4e-21 107.8 129 46.5
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 2.3e-21 107.1 81 63.0
Aa31LG1G21320 Aethionema arabicum HOM05D005503 ORTHO05D008949 4.0e-21 106.3 126 46.0
Sp6g38760 Schrenkiella parvula HOM05D005503 ORTHO05D008949 4.0e-21 106.3 145 43.4
Ah.13g077080 Amaranthus hybridus HOM05D005503 ORTHO05D008949 1.5e-20 104.4 99 55.6
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 1.5e-20 104.4 124 46.8
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 2.0e-20 104.0 104 51.9
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 2.0e-20 104.0 104 51.9
HanXRQChr10g0298211 Helianthus annuus HOM05D005503 ORTHO05D008949 3.4e-20 103.2 91 58.2
Nitab4.5_0001618g0220 Nicotiana tabacum HOM05D005503 ORTHO05D008949 3.4e-20 103.2 87 58.6
AL6G13590 Arabidopsis lyrata HOM05D005503 ORTHO05D008949 4.4e-20 102.8 104 51.0
AT5G04000 Arabidopsis thaliana HOM05D005503 ORTHO05D008949 5.8e-20 102.4 109 52.3
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 1.3e-19 101.3 100 53.0
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 2.2e-19 100.5 104 51.0
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 2.2e-19 100.5 104 51.0
CDE09G0956 Ceratophyllum demersum HOM05D003424 ORTHO05D004025 2.2e-19 100.5 74 66.2
Nitab4.5_0000826g0100 Nicotiana tabacum HOM05D005503 ORTHO05D008949 4.9e-19 99.4 128 46.1
HPP92_027974 Vanilla planifolia HOM05D005503 ORTHO05D008949 6.4e-19 99.0 89 53.9
Carub.0006s0293 Capsella rubella HOM05D005503 ORTHO05D008949 8.3e-19 98.6 105 50.5
THA.LOC104816402 Tarenaya hassleriana HOM05D005503 ORTHO05D008949 1.1e-18 98.2 68 67.6
unitig_22.g6053 Utricularia gibba HOM05D005503 ORTHO05D008949 1.1e-18 98.2 81 60.5
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 1.4e-18 97.8 74 62.2
Migut.J01714 Erythranthe guttata HOM05D005503 ORTHO05D008949 1.4e-18 97.8 85 58.8
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 1.9e-18 97.4 113 45.1
DCAR_013615 Daucus carota HOM05D005503 ORTHO05D008949 1.9e-18 97.4 79 62.0
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 5.4e-18 95.9 68 67.6
Peaxi162Scf00130g00911 Petunia axillaris HOM05D005503 ORTHO05D008949 5.4e-18 95.9 87 57.5
SGA_v2.0_scaffold69G23127 Striga asiatica HOM05D005503 ORTHO05D008949 5.4e-18 95.9 75 64.0
Sopen04g008520 Solanum pennellii HOM05D005503 ORTHO05D008949 1.6e-17 94.4 77 62.3
PGSC0003DMG400012701 Solanum tuberosum HOM05D005503 ORTHO05D008949 1.6e-17 94.4 77 62.3
Solyc04g016420.3 Solanum lycopersicum HOM05D005503 ORTHO05D008949 2.0e-17 94.0 88 54.5
CAN.G1237.11 Capsicum annuum HOM05D005503 ORTHO05D008949 3.5e-17 93.2 87 52.9
Ah.04g151390 Amaranthus hybridus HOM05D005503 ORTHO05D008949 1.0e-16 91.7 66 65.2
SalBow6G3706 Salvia bowleyana HOM05D005503 ORTHO05D008949 5.0e-16 89.4 82 56.1
SalBow6G4155 Salvia bowleyana HOM05D005503 ORTHO05D008949 5.0e-16 89.4 82 56.1
PSO063G5603 Papaver somniferum HOM05D005503 ORTHO05D008949 5.6e-15 85.9 84 56.0
Os05g0496000 Oryza sativa ssp. japonica HOM05D005503 ORTHO05D008949 2.8e-14 83.6 64 59.4
Zm00001eb291660 Zea mays HOM05D005503 ORTHO05D008949 2.8e-14 83.6 71 56.3
HPP92_018218 Vanilla planifolia HOM05D005503 ORTHO05D008949 3.4e-12 76.6 69 52.2
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 7.5e-12 75.5 72 54.2
Hma1.2p1_0005F.1_g004410 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 1.3e-11 74.7 69 53.6
Mapoly0048s0063 Marchantia polymorpha HOM05D005503 ORTHO05D008949 1.7e-11 74.3 104 40.4
Rhsim04G0170300 Rhododendron simsii HOM05D005503 ORTHO05D008949 2.7e-09 67.0 98 40.8
Rhsim04G0037200 Rhododendron simsii HOM05D005503 ORTHO05D008949 1.5e-07 61.2 76 43.4


User provided reference genes

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