Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p003302 Quercus lobata HOM05D000007 ORTHO05D000039 2.0e-65 252.3 128 100.0
QL07p003314 Quercus lobata HOM05D000007 ORTHO05D000039 3.0e-29 132.1 133 56.4
QL07p003496 Quercus lobata HOM05D000007 ORTHO05D000039 4.7e-22 108.2 131 48.9
QL07p003114 Quercus lobata HOM05D000007 ORTHO05D000039 1.0e-21 107.1 127 48.8
QL11p003899 Quercus lobata HOM05D000007 ORTHO05D000039 1.1e-20 103.6 135 48.1
QL11p003889 Quercus lobata HOM05D000007 ORTHO05D000039 5.7e-20 101.3 133 47.4
QL07p003134 Quercus lobata HOM05D000007 ORTHO05D000039 2.8e-19 99.0 130 43.8
QL07p003148 Quercus lobata HOM05D000007 ORTHO05D000039 6.3e-19 97.8 130 43.1
QL07p003322 Quercus lobata HOM05D000007 ORTHO05D000039 1.1e-18 97.1 141 43.3
QL11p003050 Quercus lobata HOM05D000007 ORTHO05D000039 7.0e-18 94.4 134 45.5
QL08p020282 Quercus lobata HOM05D000007 ORTHO05D000039 2.6e-17 92.4 131 44.3
QL07p003552 Quercus lobata HOM05D000007 ORTHO05D000039 1.3e-16 90.1 135 41.5
QL04p005232 Quercus lobata HOM05D000007 ORTHO05D000039 2.2e-16 89.4 142 40.8
QL07p003180 Quercus lobata HOM05D000007 ORTHO05D000039 2.9e-16 89.0 134 44.8
QL08p019850 Quercus lobata HOM05D000007 ORTHO05D000039 2.9e-16 89.0 146 40.4
QL08p020302 Quercus lobata HOM05D000007 ORTHO05D000039 8.5e-16 87.4 137 42.3
QL01p000757 Quercus lobata HOM05D000007 ORTHO05D000039 1.5e-15 86.7 123 44.7
QL08p020054 Quercus lobata HOM05D000007 ORTHO05D000039 1.0e-13 80.5 128 43.0
QL08p020067 Quercus lobata HOM05D000007 ORTHO05D000039 1.0e-13 80.5 128 43.0
QL03p014472 Quercus lobata HOM05D000007 ORTHO05D000039 1.4e-13 80.1 130 39.2
QL07p003229 Quercus lobata HOM05D000007 ORTHO05D000039 1.4e-13 80.1 141 42.6
QL07p003540 Quercus lobata HOM05D000007 ORTHO05D000039 1.4e-13 80.1 131 43.5
QL03p015085 Quercus lobata HOM05D000007 ORTHO05D000039 2.0e-12 76.3 130 38.5
QL07p003609 Quercus lobata HOM05D000007 ORTHO05D000039 2.6e-12 75.9 131 38.2
MD03G1028300 Malus domestica HOM05D000007 ORTHO05D000039 1.7e-11 73.2 131 38.9
QL08p020259 Quercus lobata HOM05D000007 ORTHO05D000039 2.2e-11 72.8 134 36.6
QL03p005922 Quercus lobata HOM05D000007 ORTHO05D000039 3.7e-11 72.0 135 37.8
QL04p064435 Quercus lobata HOM05D000007 ORTHO05D000039 3.7e-11 72.0 135 37.8
QL04p064442 Quercus lobata HOM05D000007 ORTHO05D000039 3.7e-11 72.0 135 37.8
QL11p051041 Quercus lobata HOM05D000007 ORTHO05D000039 3.7e-11 72.0 145 36.6
QL11p000252 Quercus lobata HOM05D000007 ORTHO05D000039 8.3e-11 70.9 139 38.8
MD03G1028100 Malus domestica HOM05D000007 ORTHO05D000039 2.4e-10 69.3 130 40.0
QL03p005929 Quercus lobata HOM05D000007 ORTHO05D000039 2.4e-10 69.3 135 37.0
QL02p059236 Quercus lobata HOM05D000007 ORTHO05D000039 3.1e-10 68.9 132 36.4
Duzib268G1877 Durio zibethinus HOM05D000007 ORTHO05D000039 7.0e-10 67.8 88 46.6
MD03G1027900 Malus domestica HOM05D000007 ORTHO05D000039 7.0e-10 67.8 151 34.4
QL07p003478 Quercus lobata HOM05D000007 ORTHO05D029344 7.0e-10 67.8 110 39.1
MD03G1028200 Malus domestica HOM05D000007 ORTHO05D000039 2.0e-09 66.2 123 39.0
QL02p058825 Quercus lobata HOM05D000007 ORTHO05D000039 2.0e-09 66.2 132 36.4
Haze_22814 Corylus avellana HOM05D000007 ORTHO05D000039 2.7e-09 65.9 129 34.1
Gohir.A11G282760 Gossypium hirsutum HOM05D000007 ORTHO05D000039 2.7e-09 65.9 106 40.6
MD03G1028000 Malus domestica HOM05D000007 ORTHO05D000039 2.7e-09 65.9 117 35.9
QL11p051030 Quercus lobata HOM05D000007 ORTHO05D000039 2.7e-09 65.9 146 36.3
FvH4_1g22270 Fragaria vesca HOM05D000007 ORTHO05D000039 3.5e-09 65.5 102 37.3
Prupe.4G210300 Prunus persica HOM05D000007 ORTHO05D000039 3.5e-09 65.5 132 33.3
FvH4_3g18920 Fragaria vesca HOM05D000007 ORTHO05D000039 5.9e-09 64.7 135 36.3
FAN19G1046 Fragaria x ananassa HOM05D000007 ORTHO05D000039 5.9e-09 64.7 102 37.3
QL04p019213 Quercus lobata HOM05D000007 ORTHO05D000039 7.7e-09 64.3 137 31.4
RcHm_v2.0_Chr5g0031801 Rosa chinensis HOM05D000007 ORTHO05D000039 7.7e-09 64.3 140 37.1
FAN11G0403 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.0e-08 63.9 135 34.8
Gohir.D11G296400 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.0e-08 63.9 106 39.6
Gorai.007G319500 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.0e-08 63.9 106 39.6
Prupe.6G096300 Prunus persica HOM05D000007 ORTHO05D000039 1.0e-08 63.9 147 32.0
Dinv24454 Davidia involucrata HOM05D000007 ORTHO05D000039 1.7e-08 63.2 135 32.6
RcHm_v2.0_Chr2g0116421 Rosa chinensis HOM05D000007 ORTHO05D000039 1.7e-08 63.2 102 37.3
RcHm_v2.0_Chr2g0116451 Rosa chinensis HOM05D000007 ORTHO05D000039 2.2e-08 62.8 102 37.3
RcHm_v2.0_Chr5g0031741 Rosa chinensis HOM05D000007 ORTHO05D000039 2.2e-08 62.8 140 36.4
Cfa020533 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.9e-08 62.4 133 33.1
RcHm_v2.0_Chr1g0348511 Rosa chinensis HOM05D000007 ORTHO05D000039 2.9e-08 62.4 140 35.7
RcHm_v2.0_Chr5g0031751 Rosa chinensis HOM05D000007 ORTHO05D000039 2.9e-08 62.4 140 33.6
Dinv24453 Davidia involucrata HOM05D000007 ORTHO05D000039 3.8e-08 62.0 135 32.6
FAN11G3730 Fragaria x ananassa HOM05D000007 ORTHO05D000039 3.8e-08 62.0 152 31.6
FAN06G0669 Fragaria x ananassa HOM05D000007 ORTHO05D000039 5.0e-08 61.6 127 33.1
FAN06G4010 Fragaria x ananassa HOM05D000007 ORTHO05D000039 5.0e-08 61.6 127 33.1
Prupe.4G150700 Prunus persica HOM05D000007 ORTHO05D000039 5.0e-08 61.6 137 32.1
FvH4_3g42380 Fragaria vesca HOM05D000007 ORTHO05D000039 6.5e-08 61.2 121 36.4
Manes.09G122100 Manihot esculenta HOM05D000007 ORTHO05D000039 6.5e-08 61.2 127 37.0
RcHm_v2.0_Chr5g0075881 Rosa chinensis HOM05D000007 ORTHO05D000039 8.5e-08 60.8 164 31.7
MSTRG.6523 Avicennia marina HOM05D000007 ORTHO05D000039 1.5e-07 60.1 133 34.6
COL.COLO4_09451 Corchorus olitorius HOM05D000007 ORTHO05D000039 1.5e-07 60.1 88 45.5
Dinv07011 Davidia involucrata HOM05D000007 ORTHO05D000039 1.5e-07 60.1 141 34.0
FAN16G0172 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.5e-07 60.1 148 29.7
Migut.M00307 Erythranthe guttata HOM05D000007 ORTHO05D000039 1.9e-07 59.7 129 38.0
Thecc.07G075500 Theobroma cacao HOM05D000007 ORTHO05D000039 1.9e-07 59.7 87 43.7
CSS0036577 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 2.5e-07 59.3 133 32.3
FAN21G0203 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.5e-07 59.3 134 34.3
FAN21G3753 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.5e-07 59.3 134 34.3
Lj8P116T38 Lonicera japonica HOM05D000007 ORTHO05D000039 2.5e-07 59.3 134 29.9
MD03G1028400 Malus domestica HOM05D000007 ORTHO05D000039 2.5e-07 59.3 114 37.7
Potri.011G121200 Populus trichocarpa HOM05D000007 ORTHO05D000039 2.5e-07 59.3 132 33.3
Sabra11G0105200 Salix brachista HOM05D000007 ORTHO05D000039 2.5e-07 59.3 132 34.8
Sabra11G0106100 Salix brachista HOM05D000007 ORTHO05D000039 2.5e-07 59.3 132 34.1
Cpa.g.sc83.30 Carica papaya HOM05D000007 ORTHO05D000017 3.2e-07 58.9 114 39.5
Haze_09499 Corylus avellana HOM05D000007 ORTHO05D000039 3.2e-07 58.9 114 32.5
DCAR_026597 Daucus carota HOM05D000007 ORTHO05D000017 3.2e-07 58.9 93 33.3
FvH4_1g22290 Fragaria vesca HOM05D000007 ORTHO05D000039 3.2e-07 58.9 100 34.0
MD11G1031100 Malus domestica HOM05D000007 ORTHO05D000039 3.2e-07 58.9 111 36.0
Prupe.6G287700 Prunus persica HOM05D000007 ORTHO05D000039 3.2e-07 58.9 120 34.2
FAN11G1989 Fragaria x ananassa HOM05D000007 ORTHO05D000039 4.2e-07 58.5 108 38.9
FAN25G2864 Fragaria x ananassa HOM05D000007 ORTHO05D020700 4.2e-07 58.5 103 35.0
Hma1.2p1_0178F.1_g078390 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 4.2e-07 58.5 135 31.1
QL07p003126 Quercus lobata HOM05D000007 ORTHO05D000039 4.2e-07 58.5 119 34.5
Dinv21276 Davidia involucrata HOM05D000007 ORTHO05D000039 5.5e-07 58.2 133 33.1
Dinv24452 Davidia involucrata HOM05D000007 ORTHO05D000039 5.5e-07 58.2 137 31.4
FAN09G2562 Fragaria x ananassa HOM05D000007 ORTHO05D000039 5.5e-07 58.2 139 36.0
FAN19G1395 Fragaria x ananassa HOM05D000007 ORTHO05D000039 5.5e-07 58.2 93 35.5
Lj1P652T23 Lonicera japonica HOM05D000007 ORTHO05D000039 7.2e-07 57.8 132 30.3
Prupe.4G156000 Prunus persica HOM05D000007 ORTHO05D000039 7.2e-07 57.8 87 34.5
PGSC0003DMG400010275 Solanum tuberosum HOM05D000007 ORTHO05D000039 7.2e-07 57.8 133 30.8
Prupe.5G081800 Prunus persica HOM05D000007 ORTHO05D000039 9.4e-07 57.4 137 32.8
QL04p019206 Quercus lobata HOM05D000007 ORTHO05D000039 9.4e-07 57.4 135 32.6
FAN09G3937 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.2e-06 57.0 134 36.6
QL04p018944 Quercus lobata HOM05D000007 ORTHO05D000039 1.2e-06 57.0 144 29.9
QL04p019179 Quercus lobata HOM05D000007 ORTHO05D000039 1.2e-06 57.0 135 32.6
RcHm_v2.0_Chr2g0131321 Rosa chinensis HOM05D000007 ORTHO05D000039 1.2e-06 57.0 132 33.3
FAN05G5128 Fragaria x ananassa HOM05D004117 ORTHO05D004520 1.6e-06 56.6 134 36.6
QL04p019188 Quercus lobata HOM05D000007 ORTHO05D000039 1.6e-06 56.6 136 31.6
RcHm_v2.0_Chr5g0031731 Rosa chinensis HOM05D000007 ORTHO05D000039 1.6e-06 56.6 140 34.3
QL04p019132 Quercus lobata HOM05D000007 ORTHO05D000039 2.1e-06 56.2 137 29.9
RcHm_v2.0_Chr2g0131341 Rosa chinensis HOM05D000007 ORTHO05D000039 2.1e-06 56.2 131 32.1
Cfa020534 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.7e-06 55.8 129 30.2
COL.COLO4_09455 Corchorus olitorius HOM05D000007 ORTHO05D000039 2.7e-06 55.8 133 36.8
QL04p018852 Quercus lobata HOM05D000007 ORTHO05D000039 2.7e-06 55.8 137 29.9
QL04p019108 Quercus lobata HOM05D000007 ORTHO05D000039 2.7e-06 55.8 90 36.7
TWI56G1346 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 2.7e-06 55.8 105 33.3
Dinv05355 Davidia involucrata HOM05D000007 ORTHO05D000039 3.6e-06 55.5 133 34.6
FvH4_3g42390 Fragaria vesca HOM05D000007 ORTHO05D000039 3.6e-06 55.5 147 28.6
QL07p003276 Quercus lobata HOM05D000007 ORTHO05D000039 4.7e-06 55.1 46 58.7
RcHm_v2.0_Chr5g0039041 Rosa chinensis HOM05D000007 ORTHO05D000039 4.7e-06 55.1 134 31.3
RcHm_v2.0_Chr5g0075091 Rosa chinensis HOM05D000007 ORTHO05D000039 4.7e-06 55.1 111 35.1
arahy.Tifrunner.gnm1.ann1.37FE2U Arachis hypogaea HOM05D000007 ORTHO05D000039 6.1e-06 54.7 150 30.7
arahy.Tifrunner.gnm1.ann1.5HQE64 Arachis hypogaea HOM05D000007 ORTHO05D000039 6.1e-06 54.7 150 30.7
COL.COLO4_09452 Corchorus olitorius HOM05D000007 ORTHO05D000039 6.1e-06 54.7 145 31.0
QL04p019171 Quercus lobata HOM05D000007 ORTHO05D000039 6.1e-06 54.7 106 34.9
QL08p040450 Quercus lobata HOM05D000007 ORTHO05D000039 6.1e-06 54.7 89 32.6
COL.COLO4_10297 Corchorus olitorius HOM05D000007 ORTHO05D000039 8.0e-06 54.3 131 32.1
FvH4_3g18890 Fragaria vesca HOM05D000007 ORTHO05D000039 8.0e-06 54.3 142 34.5
FvH4_6g27880 Fragaria vesca HOM05D000007 ORTHO05D000039 8.0e-06 54.3 133 35.3
FAN14G0238 Fragaria x ananassa HOM05D000007 ORTHO05D000039 8.0e-06 54.3 133 35.3
Prupe.4G151000 Prunus persica HOM05D000007 ORTHO05D000039 8.0e-06 54.3 94 38.3
QL04p019437 Quercus lobata HOM05D000007 ORTHO05D000039 8.0e-06 54.3 139 28.8
QL11p016472 Quercus lobata HOM05D000007 ORTHO05D337293 8.0e-06 54.3 75 41.3
Rhsim04G0172900 Rhododendron simsii HOM05D000007 ORTHO05D000017 8.0e-06 54.3 131 29.0


User provided reference genes

Program Settings