Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p001621 Quercus lobata HOM05D028519 ORTHO05D000283 2.3e-59 233.8 403 100.0
QL07p001701 Quercus lobata HOM05D039357 ORTHO05D000283 3.6e-20 103.6 48 89.6
QL04p092880 Quercus lobata HOM05D028519 ORTHO05D336979 1.4e-16 91.7 86 62.8
QL04p091488 Quercus lobata HOM05D028519 ORTHO05D338001 4.7e-12 76.6 63 65.1
Dinv04241 Davidia involucrata HOM05D013547 ORTHO05D000283 4.9e-09 66.6 41 58.5
Dinv24659 Davidia involucrata HOM05D024841 ORTHO05D000283 7.8e-07 59.3 41 51.2
Dinv09491 Davidia involucrata HOM05D013557 ORTHO05D015636 1.0e-06 58.9 48 43.8
QL07p001756 Quercus lobata HOM05D000058 ORTHO05D000077 1.0e-06 58.9 71 52.1
THA.LOC104798663 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 1.0e-06 58.9 44 50.0
BcaC08g44386 Brassica carinata HOM05D000003 ORTHO05D000283 1.3e-06 58.5 40 55.0
BraA06t26517Z Brassica rapa HOM05D000003 ORTHO05D000283 1.3e-06 58.5 59 50.8
BcaC06g34146 Brassica carinata HOM05D000003 ORTHO05D000283 1.7e-06 58.2 41 48.8
AL1G56270 Arabidopsis lyrata HOM05D005950 ORTHO05D000283 2.3e-06 57.8 43 51.2
AL96U10010 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 2.3e-06 57.8 41 53.7
BcaC01g03694 Brassica carinata HOM05D000003 ORTHO05D000283 2.3e-06 57.8 41 56.1
BraA02t06658Z Brassica rapa HOM05D000003 ORTHO05D000283 2.3e-06 57.8 46 52.2
THA.LOC104820715 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 2.3e-06 57.8 41 53.7
BcaC04g20149 Brassica carinata HOM05D000003 ORTHO05D000283 3.0e-06 57.4 46 50.0
BcaC07g40570 Brassica carinata HOM05D000003 ORTHO05D000283 3.0e-06 57.4 41 51.2
BolC4t28361H Brassica oleracea HOM05D000003 ORTHO05D000283 3.0e-06 57.4 38 55.3
BraA05t20329Z Brassica rapa HOM05D000003 ORTHO05D000004 3.0e-06 57.4 40 55.0
Dinv07814 Davidia involucrata HOM05D000003 ORTHO05D000283 3.0e-06 57.4 39 48.7
BcaB02g11468 Brassica carinata HOM05D000003 ORTHO05D000283 3.9e-06 57.0 44 50.0
C07p16410 Brassica napus HOM05D000003 ORTHO05D000283 3.9e-06 57.0 39 53.8
BolC7t42137H Brassica oleracea HOM05D000003 ORTHO05D000283 3.9e-06 57.0 39 53.8
Dinv01210 Davidia involucrata HOM05D000003 ORTHO05D000283 3.9e-06 57.0 35 57.1
Dinv01211 Davidia involucrata HOM05D000003 ORTHO05D000283 3.9e-06 57.0 35 57.1
ECA233G4110 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.9e-06 57.0 38 63.2
BcaC03g18113 Brassica carinata HOM05D000003 ORTHO05D000283 5.1e-06 56.6 44 50.0
BcaC03g18409 Brassica carinata HOM05D000003 ORTHO05D000283 5.1e-06 56.6 39 56.4
BolC2t07353H Brassica oleracea HOM05D000003 ORTHO05D000283 5.1e-06 56.6 42 54.8
BraA09t38940Z Brassica rapa HOM05D000003 ORTHO05D000283 5.1e-06 56.6 62 41.9
Carub.0001s4199 Capsella rubella HOM05D000003 ORTHO05D000283 5.1e-06 56.6 40 52.5
THA.LOC109116418 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 5.1e-06 56.6 44 50.0
Aqoxy4G00430 Aquilegia oxysepala HOM05D000003 ORTHO05D000283 6.6e-06 56.2 58 41.4
BcaB01g03207 Brassica carinata HOM05D000003 ORTHO05D000283 6.6e-06 56.2 41 48.8
BcaB06g27917 Brassica carinata HOM05D000003 ORTHO05D000283 6.6e-06 56.2 41 51.2
ECA236G2229 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.6e-06 56.2 48 43.8
PGR042G4005 Punica granatum HOM05D000003 ORTHO05D000004 6.6e-06 56.2 47 51.1
THA.LOC104815125 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 6.6e-06 56.2 46 45.7
BcaC03g15593 Brassica carinata HOM05D000003 ORTHO05D000283 8.7e-06 55.8 40 55.0


User provided reference genes

Program Settings