Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p001518 Quercus lobata HOM05D005167 ORTHO05D006312 1.4e-122 443.0 222 100.0
QL02p104239 Quercus lobata HOM05D005167 ORTHO05D006312 1.0e-85 320.5 255 71.8
QL93p0255_0001 Quercus lobata HOM05D005167 ORTHO05D006312 4.8e-83 311.6 252 70.6
Gohir.D05G124100 Gossypium hirsutum HOM05D005167 ORTHO05D006312 1.9e-42 176.8 229 46.7
Haze_09951 Corylus avellana HOM05D005167 ORTHO05D006312 2.4e-42 176.4 288 43.4
Gohir.A05G123200 Gossypium hirsutum HOM05D005167 ORTHO05D006312 9.2e-42 174.5 229 46.7
Gorai.009G128100 Gossypium raimondii HOM05D005167 ORTHO05D006312 4.6e-41 172.2 236 46.2
Thecc.06G025200 Theobroma cacao HOM05D005167 ORTHO05D006312 4.6e-41 172.2 233 48.1
CiPaw.09G096800 Carya illinoinensis HOM05D005167 ORTHO05D006312 7.8e-41 171.4 298 41.6
Atru.chr6.56 Acer truncatum HOM05D005167 ORTHO05D006312 1.5e-39 167.2 260 43.8
arahy.Tifrunner.gnm1.ann1.JG47X3 Arachis hypogaea HOM05D005167 ORTHO05D006312 9.5e-39 164.5 265 41.1
Duzib160G0520 Durio zibethinus HOM05D005167 ORTHO05D006312 1.6e-38 163.7 233 47.2
CANSAT01G2096 Cannabis sativa HOM05D005167 ORTHO05D006312 3.1e-37 159.5 255 42.4
arahy.Tifrunner.gnm1.ann1.T4BBUF Arachis hypogaea HOM05D005167 ORTHO05D006312 4.0e-37 159.1 265 40.0
Glyma.09G018700 Glycine max HOM05D005167 ORTHO05D006312 6.8e-37 158.3 258 43.4
VMungo0540G0564 Vigna mungo HOM05D005167 ORTHO05D006312 8.9e-37 157.9 262 43.1
Atru.chr6.45 Acer truncatum HOM05D005167 ORTHO05D006312 1.2e-36 157.5 253 42.7
Ciclev10001110m.g Citrus clementina HOM05D005167 ORTHO05D006312 3.4e-36 156.0 252 43.7
Phvul.006G133500 Phaseolus vulgaris HOM05D005167 ORTHO05D006312 9.8e-36 154.5 259 43.2
Lj9C241G5 Lonicera japonica HOM05D005167 ORTHO05D006312 2.2e-35 153.3 280 40.7
Dinv24548 Davidia involucrata HOM05D000457 ORTHO05D000560 4.9e-35 152.1 288 39.9
Sc07g0003350 Simmondsia chinensis HOM05D005167 ORTHO05D006312 8.3e-35 151.4 259 40.9
Sc07g0003360 Simmondsia chinensis HOM05D005167 ORTHO05D006312 8.3e-35 151.4 259 40.9
Hma1.2p1_0052F.1_g030120 Hydrangea macrophylla HOM05D005167 ORTHO05D006312 2.4e-34 149.8 293 37.9
Cc02_g36800 Coffea canephora HOM05D005167 ORTHO05D006312 3.2e-34 149.4 281 37.4
CAN.G1379.23 Capsicum annuum HOM05D005167 ORTHO05D006312 4.1e-34 149.1 280 39.3
TWI23G0323 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 4.1e-34 149.1 288 38.9
Migut.N00879 Erythranthe guttata HOM05D005167 ORTHO05D006312 9.2e-34 147.9 222 43.7
HanXRQChr15g0488451 Helianthus annuus HOM05D005167 ORTHO05D006312 6.0e-33 145.2 239 41.4
Lj6g0014124 Lotus japonicus HOM05D005167 ORTHO05D006312 7.8e-33 144.8 276 41.3
PGR042G3689 Punica granatum HOM05D005167 ORTHO05D006312 7.8e-33 144.8 283 38.9
Oeu000168.1 Olea europaea HOM05D005167 ORTHO05D006312 1.0e-32 144.4 207 44.4
SGA_v2.0_scaffold401G50971 Striga asiatica HOM05D005167 ORTHO05D006312 1.0e-32 144.4 266 36.8
PGSC0003DMG400018222 Solanum tuberosum HOM05D005167 ORTHO05D006312 1.7e-32 143.7 279 37.6
DCAR_029460 Daucus carota HOM05D005167 ORTHO05D006312 3.0e-32 142.9 306 35.6
SalBow3G4053 Salvia bowleyana HOM05D005167 ORTHO05D006312 3.0e-32 142.9 273 38.5
Nitab4.5_0004176g0010 Nicotiana tabacum HOM05D005167 ORTHO05D006312 5.1e-32 142.1 280 37.9
Nitab4.5_0001085g0040 Nicotiana tabacum HOM05D005167 ORTHO05D006312 1.5e-31 140.6 289 37.4
Manes.06G015900 Manihot esculenta HOM05D005167 ORTHO05D006312 3.3e-31 139.4 286 38.8
PSO170G3824 Papaver somniferum HOM05D005167 ORTHO05D006312 3.3e-31 139.4 247 40.5
ECA248G1565 Erigeron canadensis HOM05D005167 ORTHO05D006312 5.6e-31 138.7 268 40.3
Potri.003G046300 Populus trichocarpa HOM05D005167 ORTHO05D006312 7.3e-31 138.3 282 38.7
Solyc01g102670.3 Solanum lycopersicum HOM05D005167 ORTHO05D006312 1.6e-30 137.1 279 36.2
Sopen01g045080 Solanum pennellii HOM05D005167 ORTHO05D006312 2.8e-30 136.3 279 35.5
Peaxi162Scf00194g00934 Petunia axillaris HOM05D005167 ORTHO05D006312 4.7e-30 135.6 272 35.3
Eucgr.G00036 Eucalyptus grandis HOM05D005167 ORTHO05D006312 6.2e-30 135.2 304 35.5
Sabra03G0019800 Salix brachista HOM05D005167 ORTHO05D006312 6.2e-30 135.2 280 37.5
EL10Ac6g13938 Beta vulgaris HOM05D005167 ORTHO05D006312 3.1e-29 132.9 297 34.7
AUR62024866 Chenopodium quinoa HOM05D005167 ORTHO05D006312 5.8e-28 128.6 295 35.3
Ah.02g128610 Amaranthus hybridus HOM05D005167 ORTHO05D006312 7.6e-28 128.3 280 35.4
Os07g0657600 Oryza sativa ssp. japonica HOM05D005167 ORTHO05D006312 1.7e-27 127.1 261 37.5
Nn5g27095 Nelumbo nucifera HOM05D005167 ORTHO05D006312 3.8e-27 125.9 295 34.6
HPP92_025056 Vanilla planifolia HOM05D005167 ORTHO05D006312 8.4e-27 124.8 243 36.6
vmacro19812 Vaccinium macrocarpon HOM05D005167 ORTHO05D006312 3.0e-24 116.3 262 37.0
Rhsim05G0120900 Rhododendron simsii HOM05D005167 ORTHO05D006312 1.1e-23 114.4 271 36.5
Hund15261 Selenicereus undatus HOM05D005167 ORTHO05D006312 2.5e-23 113.2 284 34.5
Prupe.4G287800 Prunus persica HOM05D005167 ORTHO05D006312 5.6e-23 112.1 201 37.8
COL.COLO4_11943 Corchorus olitorius HOM05D005167 ORTHO05D006312 7.3e-23 111.7 145 46.9
Thecc.07G187300 Theobroma cacao HOM05D005167 ORTHO05D006312 1.2e-22 110.9 208 36.1
Nn3g20631 Nelumbo nucifera HOM05D005167 ORTHO05D006312 1.8e-21 107.1 199 34.7
AUR62032503 Chenopodium quinoa HOM05D005167 ORTHO05D000001 2.4e-21 106.7 89 64.0
Actinidia12290 Actinidia chinensis HOM05D005167 ORTHO05D006312 4.0e-21 105.9 215 35.8
Duzib116G0260 Durio zibethinus HOM05D005167 ORTHO05D006312 4.0e-21 105.9 208 35.1
Eucgr.B01586 Eucalyptus grandis HOM05D005167 ORTHO05D006312 1.5e-20 104.0 211 36.5
Actinidia01647 Actinidia chinensis HOM05D005167 ORTHO05D006312 3.4e-20 102.8 83 65.1
THA.LOC104809040 Tarenaya hassleriana HOM05D005167 ORTHO05D006312 5.8e-20 102.1 286 32.2
TWI31G1352 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 7.6e-20 101.7 224 32.6
BcaB03g16877 Brassica carinata HOM05D005167 ORTHO05D006312 2.2e-19 100.1 223 30.5
ATR0782G113 Amborella trichopoda HOM05D005167 ORTHO05D006312 4.9e-19 99.0 272 31.6
CiPaw.15G107300 Carya illinoinensis HOM05D005167 ORTHO05D006312 1.1e-18 97.8 223 31.8
TWI15G0790 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 1.1e-18 97.8 209 34.0
CARHR046110 Cardamine hirsuta HOM05D005167 ORTHO05D006312 2.4e-18 96.7 226 30.5
GSVIVG01029417001 Vitis vinifera HOM05D005167 ORTHO05D006312 4.2e-18 95.9 207 35.7
CDE02G4394 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 5.4e-18 95.5 124 46.8
CiPaw.15G107200 Carya illinoinensis HOM05D005167 ORTHO05D006312 7.1e-18 95.1 219 33.3
Manes.18G143300 Manihot esculenta HOM05D005167 ORTHO05D006312 1.6e-17 94.0 217 34.1
SpUn0422_0010 Schrenkiella parvula HOM05D005167 ORTHO05D006312 2.7e-17 93.2 231 31.2
MD00G1096100 Malus domestica HOM05D005167 ORTHO05D006312 3.5e-17 92.8 205 33.7
TAR629G0123 Trochodendron aralioides HOM05D005167 ORTHO05D006312 3.5e-17 92.8 207 35.3
Aqoxy4G01544 Aquilegia oxysepala HOM05D005167 ORTHO05D006312 6.0e-17 92.0 201 33.3
Thhalv10028036m.g Eutrema salsugineum HOM05D005167 ORTHO05D006312 6.0e-17 92.0 231 30.3
Atru.chr9.69 Acer truncatum HOM05D005167 ORTHO05D006312 7.8e-17 91.7 199 32.7
BcaC06g36613 Brassica carinata HOM05D005167 ORTHO05D006312 7.8e-17 91.7 223 29.6
C07p02160 Brassica napus HOM05D005167 ORTHO05D006312 7.8e-17 91.7 223 29.6
BolC7t40625H Brassica oleracea HOM05D005167 ORTHO05D006312 7.8e-17 91.7 223 29.6
Carub.0003s3540 Capsella rubella HOM05D005167 ORTHO05D006312 1.0e-16 91.3 226 31.4
MBI17_g35115_MAGBIO Magnolia biondii HOM05D005167 ORTHO05D006312 1.3e-16 90.9 88 58.0
BcaC08g44461 Brassica carinata HOM05D005167 ORTHO05D006312 1.7e-16 90.5 232 30.2
Glyma.13G026000 Glycine max HOM05D005167 ORTHO05D006312 1.7e-16 90.5 211 30.3
A03p66890 Brassica napus HOM05D005167 ORTHO05D006312 3.9e-16 89.4 223 29.1
BraA01t02792Z Brassica rapa HOM05D005167 ORTHO05D006312 3.9e-16 89.4 223 29.1
Cpa.g.sc15.42 Carica papaya HOM05D005167 ORTHO05D006312 3.9e-16 89.4 176 31.8
BcaC06g31947 Brassica carinata HOM05D005167 ORTHO05D006312 1.5e-15 87.4 223 28.3
Manes.18G143000 Manihot esculenta HOM05D005167 ORTHO05D006312 3.3e-15 86.3 195 33.3
Gorai.006G003300 Gossypium raimondii HOM05D005167 ORTHO05D006312 9.6e-15 84.7 213 32.4
Gohir.A09G002900 Gossypium hirsutum HOM05D005167 ORTHO05D006312 1.3e-14 84.3 213 33.8
Gohir.D09G002700 Gossypium hirsutum HOM05D005167 ORTHO05D006312 1.3e-14 84.3 213 32.4
Dinv01746 Davidia involucrata HOM05D005167 ORTHO05D006312 3.6e-14 82.8 262 29.0
FAN19G3173 Fragaria x ananassa HOM05D005167 ORTHO05D006312 3.1e-13 79.7 206 32.0
FAN26G1264 Fragaria x ananassa HOM05D005167 ORTHO05D006312 5.3e-13 79.0 207 31.9
RcHm_v2.0_Chr3g0496761 Rosa chinensis HOM05D005167 ORTHO05D006312 5.3e-13 79.0 229 31.4
Lju225A7G63 Lonicera japonica HOM05D005167 ORTHO05D006312 6.9e-13 78.6 207 32.4
Ciclev10030405m.g Citrus clementina HOM05D005167 ORTHO05D006312 2.0e-12 77.0 200 33.0
Cc00_g01280 Coffea canephora HOM05D005167 ORTHO05D006312 2.0e-12 77.0 207 30.4
SGA_v2.0_scaffold150G36624 Striga asiatica HOM05D005167 ORTHO05D006312 7.6e-12 75.1 207 31.9
Nitab4.5_0005690g0020 Nicotiana tabacum HOM05D005167 ORTHO05D006312 1.3e-11 74.3 207 29.0
CANSAT64G2797 Cannabis sativa HOM05D005167 ORTHO05D006312 4.9e-11 72.4 210 30.0
Lsat_1_v5_gn_8_167100 Lactuca sativa HOM05D005167 ORTHO05D006312 4.9e-11 72.4 214 29.0
C06p19120 Brassica napus HOM05D005167 ORTHO05D006312 6.4e-11 72.0 155 35.5
BolC6t37111H Brassica oleracea HOM05D005167 ORTHO05D006312 6.4e-11 72.0 155 35.5
Nitab4.5_0001246g0010 Nicotiana tabacum HOM05D005167 ORTHO05D006312 8.4e-11 71.6 207 29.5
Eucgr.B01611 Eucalyptus grandis HOM05D005167 ORTHO05D006312 1.4e-10 70.9 103 40.8
CAN.G989.3 Capsicum annuum HOM05D005167 ORTHO05D006312 2.1e-09 67.0 208 29.3
Nitab4.5_0007926g0020 Nicotiana tabacum HOM05D005167 ORTHO05D006312 2.7e-09 66.6 207 28.0
ECA234G3362 Erigeron canadensis HOM05D005167 ORTHO05D006312 3.5e-09 66.2 208 30.3
Oeu000169.3 Olea europaea HOM05D005167 ORTHO05D006312 3.5e-09 66.2 88 46.6
Lju225C0G3 Lonicera japonica HOM05D005167 ORTHO05D006312 4.6e-09 65.9 87 44.8
PGSC0003DMG400014526 Solanum tuberosum HOM05D005167 ORTHO05D006312 1.0e-08 64.7 207 29.0
QL01p053234 Quercus lobata HOM05D005167 ORTHO05D006312 1.3e-08 64.3 88 38.6
QL93p1868_0059 Quercus lobata HOM05D005167 ORTHO05D006312 1.3e-08 64.3 88 38.6
Sed0010261 Sechium edule HOM05D005167 ORTHO05D006312 1.8e-08 63.9 204 28.9
QL01p052835 Quercus lobata HOM05D005167 ORTHO05D006312 3.0e-08 63.2 56 60.7
Phvul.L001673 Phaseolus vulgaris HOM05D005167 ORTHO05D006312 3.9e-08 62.8 204 26.5
SpUn0005_0090 Schrenkiella parvula HOM05D005167 ORTHO05D006312 5.1e-08 62.4 105 34.3
QL93p1868_0064 Quercus lobata HOM05D005167 ORTHO05D006312 8.7e-08 61.6 56 58.9
Sopen02g001190 Solanum pennellii HOM05D005167 ORTHO05D006312 8.7e-08 61.6 169 31.4
CDE02G1408 Ceratophyllum demersum HOM05D005167 ORTHO05D006312 1.5e-07 60.8 54 55.6
Atru.chr9.63 Acer truncatum HOM05D005167 ORTHO05D006312 8.1e-06 55.1 79 39.2
HanXRQChr12g0386151 Helianthus annuus HOM05D005167 ORTHO05D006312 8.1e-06 55.1 208 27.9


User provided reference genes

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