Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p001014 Quercus lobata HOM05D001499 ORTHO05D030935 6.6e-63 243.8 118 100.0
SGA_v2.0_scaffold273G46435 Striga asiatica HOM05D001499 ORTHO05D001560 2.3e-23 112.5 102 55.9
Prupe.7G056500 Prunus persica HOM05D001499 ORTHO05D001560 3.9e-23 111.7 92 62.0
MD00G1191800 Malus domestica HOM05D001499 ORTHO05D001560 5.1e-23 111.3 93 61.3
Manes.09G020100 Manihot esculenta HOM05D001499 ORTHO05D001560 5.1e-23 111.3 92 62.0
Rhsim03G0027400 Rhododendron simsii HOM05D001499 ORTHO05D001560 8.7e-23 110.5 92 60.9
SGA_v2.0_scaffold94G28488 Striga asiatica HOM05D001499 ORTHO05D001560 8.7e-23 110.5 102 54.9
Cpa.g.sc967.2 Carica papaya HOM05D001499 ORTHO05D001560 1.1e-22 110.2 92 60.9
Cfa016805 Carpinus fangiana HOM05D001499 ORTHO05D001560 1.1e-22 110.2 60 88.3
CiPaw.10G034300 Carya illinoinensis HOM05D001499 ORTHO05D001560 1.1e-22 110.2 60 88.3
Ciclev10004686m.g Citrus clementina HOM05D001499 ORTHO05D001560 1.1e-22 110.2 80 66.2
Duzib093G1808 Durio zibethinus HOM05D001499 ORTHO05D001560 1.1e-22 110.2 60 88.3
Thecc.05G149400 Theobroma cacao HOM05D001499 ORTHO05D001560 1.1e-22 110.2 60 88.3
vmacro07834 Vaccinium macrocarpon HOM05D001499 ORTHO05D001560 1.1e-22 110.2 60 88.3
GSVIVG01033256001 Vitis vinifera HOM05D001499 ORTHO05D001560 1.1e-22 110.2 60 88.3
Gohir.A02G107400 Gossypium hirsutum HOM05D001499 ORTHO05D001560 1.5e-22 109.8 80 66.2
Gohir.D03G069600 Gossypium hirsutum HOM05D001499 ORTHO05D001560 1.5e-22 109.8 80 66.2
Gorai.003G091100 Gossypium raimondii HOM05D001499 ORTHO05D001560 1.5e-22 109.8 80 66.2
Lju124C43T7 Lonicera japonica HOM05D001499 ORTHO05D001560 1.5e-22 109.8 92 59.8
Actinidia22801 Actinidia chinensis HOM05D001499 ORTHO05D001560 1.9e-22 109.4 60 85.0
CSS0027906 Camellia sinensis var. sinensis HOM05D001499 ORTHO05D001560 2.5e-22 109.0 60 86.7
Duzib106G0340 Durio zibethinus HOM05D001499 ORTHO05D001560 2.5e-22 109.0 60 86.7
Potri.006G049100 Populus trichocarpa HOM05D001499 ORTHO05D001560 2.5e-22 109.0 60 86.7
Atru.chr1.1126 Acer truncatum HOM05D001499 ORTHO05D001560 3.3e-22 108.6 80 66.2
CSS0008595 Camellia sinensis var. sinensis HOM05D001499 ORTHO05D001560 3.3e-22 108.6 60 86.7
CSS0040554 Camellia sinensis var. sinensis HOM05D001499 ORTHO05D001560 3.3e-22 108.6 60 86.7
CDE09G1433 Ceratophyllum demersum HOM05D001499 ORTHO05D001560 3.3e-22 108.6 60 86.7
Nn7g36317 Nelumbo nucifera HOM05D001499 ORTHO05D001560 3.3e-22 108.6 60 86.7
TAR633G1315 Trochodendron aralioides HOM05D001499 ORTHO05D001560 3.3e-22 108.6 60 85.0
PGR004G0169 Punica granatum HOM05D001499 ORTHO05D001560 4.3e-22 108.2 80 65.0
TAR636G3397 Trochodendron aralioides HOM05D001499 ORTHO05D001560 4.3e-22 108.2 60 85.0
CiPaw.09G039100 Carya illinoinensis HOM05D001499 ORTHO05D001560 5.6e-22 107.8 60 85.0
CsaV3_4G011840 Cucumis sativus L. HOM05D001499 ORTHO05D001560 5.6e-22 107.8 94 59.6
Glyma.02G185300 Glycine max HOM05D001499 ORTHO05D001560 5.6e-22 107.8 60 85.0
Glyma.10G113100 Glycine max HOM05D001499 ORTHO05D001560 5.6e-22 107.8 60 85.0
Lalb_Chr25g0287171 Lupinus albus HOM05D001499 ORTHO05D001560 5.6e-22 107.8 92 59.8
PSO339G1573 Papaver somniferum HOM05D001499 ORTHO05D001560 5.6e-22 107.8 92 60.9
PSO384G4106 Papaver somniferum HOM05D001499 ORTHO05D001560 5.6e-22 107.8 92 60.9
Peaxi162Scf00130g00417 Petunia axillaris HOM05D001499 ORTHO05D001560 5.6e-22 107.8 94 57.4
Actinidia39215 Actinidia chinensis HOM05D001499 ORTHO05D001560 9.6e-22 107.1 60 83.3
Dinv17969 Davidia involucrata HOM05D001499 ORTHO05D001560 9.6e-22 107.1 60 86.7
Migut.K00092 Erythranthe guttata HOM05D001499 ORTHO05D001560 9.6e-22 107.1 60 81.7
COL.COLO4_04401 Corchorus olitorius HOM05D001499 ORTHO05D001560 1.3e-21 106.7 60 85.0
DCAR_020497 Daucus carota HOM05D001499 ORTHO05D001560 1.3e-21 106.7 60 83.3
Dinv39621 Davidia involucrata HOM05D001499 ORTHO05D001560 1.3e-21 106.7 60 85.0
Oeu008164.1 Olea europaea HOM05D001499 ORTHO05D001560 1.3e-21 106.7 80 63.8
TWI77G0056 Tripterygium wilfordii HOM05D001499 ORTHO05D001560 1.3e-21 106.7 60 85.0
VMungo0720G2024 Vigna mungo HOM05D001499 ORTHO05D001560 1.3e-21 106.7 60 83.3
ATR0320G039 Amborella trichopoda HOM05D001499 ORTHO05D001560 1.6e-21 106.3 60 83.3
Sopen04g008040 Solanum pennellii HOM05D001499 ORTHO05D001560 1.6e-21 106.3 90 58.9
MELO3C023105.2 Cucumis melo HOM05D001499 ORTHO05D001560 2.1e-21 105.9 94 58.5
Sabra06G0034400 Salix brachista HOM05D001499 ORTHO05D001560 2.1e-21 105.9 60 85.0
ClCG04G003420 Citrullus lanatus HOM05D001499 ORTHO05D001560 2.8e-21 105.5 92 59.8
FvH4_6g24270 Fragaria vesca HOM05D001499 ORTHO05D001560 2.8e-21 105.5 60 85.0
FAN02G2115 Fragaria x ananassa HOM05D001499 ORTHO05D001560 2.8e-21 105.5 60 85.0
FAN05G4798 Fragaria x ananassa HOM05D001499 ORTHO05D001560 2.8e-21 105.5 60 85.0
FAN09G3104 Fragaria x ananassa HOM05D001499 ORTHO05D001560 2.8e-21 105.5 60 85.0
Sed0013588 Sechium edule HOM05D001499 ORTHO05D001560 2.8e-21 105.5 92 58.7
Ca_10365_v3 Cicer arietinum L. HOM05D001499 ORTHO05D001560 3.6e-21 105.1 60 81.7
DCAR_009067 Daucus carota HOM05D001499 ORTHO05D001560 3.6e-21 105.1 92 57.6
ECA248G2226 Erigeron canadensis HOM05D001499 ORTHO05D001560 3.6e-21 105.1 60 83.3
Lsat_1_v5_gn_5_161241 Lactuca sativa HOM05D001499 ORTHO05D001560 3.6e-21 105.1 60 83.3
SalBow6G6755 Salvia bowleyana HOM05D001499 ORTHO05D001560 3.6e-21 105.1 99 55.6
arahy.Tifrunner.gnm1.ann1.K81J42 Arachis hypogaea HOM05D001499 ORTHO05D001560 4.8e-21 104.8 80 62.5
ECA236G5056 Erigeron canadensis HOM05D001499 ORTHO05D001560 4.8e-21 104.8 60 85.0
HanXRQChr13g0396471 Helianthus annuus HOM05D001499 ORTHO05D001560 4.8e-21 104.8 60 81.7
Lsat_1_v5_gn_8_81141 Lactuca sativa HOM05D001499 ORTHO05D001560 4.8e-21 104.8 60 85.0
Medtr1g053160 Medicago truncatula HOM05D001499 ORTHO05D001560 4.8e-21 104.8 60 81.7
Peaxi162Scf00109g00516 Petunia axillaris HOM05D001499 ORTHO05D001560 4.8e-21 104.8 60 80.0
TPR.G29104 Trifolium pratense HOM05D001499 ORTHO05D001560 4.8e-21 104.8 60 81.7
Migut.J01745 Erythranthe guttata HOM05D001499 ORTHO05D001560 6.2e-21 104.4 93 58.1
RcHm_v2.0_Chr3g0482921 Rosa chinensis HOM05D001499 ORTHO05D001560 6.2e-21 104.4 60 83.3
Sed0024523 Sechium edule HOM05D001499 ORTHO05D001560 6.2e-21 104.4 92 58.7
Ah.04g151570 Amaranthus hybridus HOM05D001499 ORTHO05D001560 8.1e-21 104.0 60 80.0
Hma1.2p1_1280F.1_g272530 Hydrangea macrophylla HOM05D001499 ORTHO05D001560 8.1e-21 104.0 60 85.0
Manes.08G051700 Manihot esculenta HOM05D001499 ORTHO05D001560 8.1e-21 104.0 60 85.0
THA.LOC104802064 Tarenaya hassleriana HOM05D001499 ORTHO05D001560 8.1e-21 104.0 92 56.5
Aqoxy2G00225 Aquilegia oxysepala HOM05D001499 ORTHO05D001560 1.1e-20 103.6 60 81.7
Eucgr.A02337 Eucalyptus grandis HOM05D001499 ORTHO05D001560 1.1e-20 103.6 80 61.2
Lj5g0024774 Lotus japonicus HOM05D001499 ORTHO05D001560 1.1e-20 103.6 60 83.3
Nitab4.5_0000364g0080 Nicotiana tabacum HOM05D001499 ORTHO05D001560 1.1e-20 103.6 60 81.7
Nitab4.5_0003307g0080 Nicotiana tabacum HOM05D001499 ORTHO05D001560 1.1e-20 103.6 60 81.7
Phvul.007G251800 Phaseolus vulgaris HOM05D001499 ORTHO05D001560 1.4e-20 103.2 60 81.7
Hund19144 Selenicereus undatus HOM05D001499 ORTHO05D001560 1.4e-20 103.2 60 81.7
PGSC0003DMG402027256 Solanum tuberosum HOM05D001499 ORTHO05D001560 1.4e-20 103.2 60 81.7
Lalb_Chr20g0110561 Lupinus albus HOM05D001499 ORTHO05D001560 1.8e-20 102.8 60 80.0
CAN.G128.7 Capsicum annuum HOM05D001499 ORTHO05D001560 2.4e-20 102.4 60 80.0
AUR62024464 Chenopodium quinoa HOM05D001499 ORTHO05D001560 2.4e-20 102.4 80 61.2
AUR62026055 Chenopodium quinoa HOM05D001499 ORTHO05D001560 2.4e-20 102.4 80 61.2
Solyc10g080080.3 Solanum lycopersicum HOM05D001499 ORTHO05D001560 2.4e-20 102.4 60 80.0
Sopen10g030690 Solanum pennellii HOM05D001499 ORTHO05D001560 2.4e-20 102.4 60 80.0
Cc06_g17670 Coffea canephora HOM05D001499 ORTHO05D001560 3.1e-20 102.1 60 78.3
unitig_26.g9049 Utricularia gibba HOM05D001499 ORTHO05D001560 3.1e-20 102.1 80 61.2
EL10Ac3g07103 Beta vulgaris HOM05D001499 ORTHO05D001560 5.3e-20 101.3 60 78.3
THA.LOC104824434 Tarenaya hassleriana HOM05D001499 ORTHO05D001560 9.0e-20 100.5 60 76.7
CANSAT80G2713 Cannabis sativa HOM05D001499 ORTHO05D001560 1.5e-19 99.8 60 80.0
Aa31LG1G23700 Aethionema arabicum HOM05D001499 ORTHO05D001560 2.0e-19 99.4 60 76.7
PGSC0003DMG400023691 Solanum tuberosum HOM05D001499 ORTHO05D001560 2.0e-19 99.4 60 78.3
Zm00001eb329630 Zea mays HOM05D001499 ORTHO05D001560 2.0e-19 99.4 60 80.0
Thhalv10016520m.g Eutrema salsugineum HOM05D001499 ORTHO05D001560 2.6e-19 99.0 80 58.8
A05p02410 Brassica napus HOM05D001499 ORTHO05D001560 3.4e-19 98.6 80 58.8
C04p02860 Brassica napus HOM05D001499 ORTHO05D001560 3.4e-19 98.6 80 58.8
BolC4t21926H Brassica oleracea HOM05D001499 ORTHO05D001560 3.4e-19 98.6 80 58.8
HPP92_025058 Vanilla planifolia HOM05D001499 ORTHO05D001560 3.4e-19 98.6 80 60.0
Sp4g23920 Schrenkiella parvula HOM05D001499 ORTHO05D001560 7.6e-19 97.4 60 75.0
arahy.Tifrunner.gnm1.ann1.GI5ZH0 Arachis hypogaea HOM05D001499 ORTHO05D001560 9.9e-19 97.1 89 56.2
Pp3c20_5530 Physcomitrium patens HOM05D001499 ORTHO05D001560 9.9e-19 97.1 94 53.2
Cre01.g054150 Chlamydomonas reinhardtii HOM05D001499 ORTHO05D001560 1.7e-18 96.3 89 53.9
MD12G1076800 Malus domestica HOM05D001499 ORTHO05D001560 2.2e-18 95.9 64 75.0
AL4G39980 Arabidopsis lyrata HOM05D001499 ORTHO05D001560 4.9e-18 94.7 80 57.5
AT2G41680 Arabidopsis thaliana HOM05D001499 ORTHO05D001560 4.9e-18 94.7 80 57.5
SMO365G0084 Selaginella moellendorffii HOM05D001499 ORTHO05D001560 4.9e-18 94.7 60 73.3
AagrBONN_evm.TU.Sc2ySwM_344.1124 Anthoceros agrestis HOM05D001499 ORTHO05D001560 6.4e-18 94.4 60 73.3
A03p23360 Brassica napus HOM05D001499 ORTHO05D001560 6.4e-18 94.4 60 73.3
BraA03t11553Z Brassica rapa HOM05D001499 ORTHO05D001560 6.4e-18 94.4 60 73.3
Mapoly0129s0051 Marchantia polymorpha HOM05D001499 ORTHO05D001560 6.4e-18 94.4 60 75.0
BraA05t19235Z Brassica rapa HOM05D001499 ORTHO05D001560 8.4e-18 94.0 81 58.0
Carub.0004s2395 Capsella rubella HOM05D001499 ORTHO05D001560 1.1e-17 93.6 60 73.3
Pp3c23_21190 Physcomitrium patens HOM05D001499 ORTHO05D001560 1.1e-17 93.6 60 75.0
CARHR136760 Cardamine hirsuta HOM05D001499 ORTHO05D001560 1.4e-17 93.2 80 56.2
BcaC01g05324 Brassica carinata HOM05D001499 ORTHO05D001560 1.9e-17 92.8 60 73.3
C03p27880 Brassica napus HOM05D001499 ORTHO05D001560 1.9e-17 92.8 60 73.3
BolC3t15159H Brassica oleracea HOM05D001499 ORTHO05D001560 1.9e-17 92.8 60 73.3
SalBow6G2288 Salvia bowleyana HOM05D001499 ORTHO05D001560 1.9e-17 92.8 90 53.3
FAN14G3970 Fragaria x ananassa HOM05D001499 ORTHO05D001560 3.2e-17 92.0 84 60.7
QL07p001252 Quercus lobata HOM05D001499 ORTHO05D001560 2.3e-15 85.9 95 52.6
PRCOL_00001290 Prasinoderma coloniale HOM05D001499 ORTHO05D001560 8.7e-15 84.0 66 60.6
BcaC02g12788 Brassica carinata HOM05D001499 ORTHO05D001560 9.0e-12 73.9 80 48.8
MCO09G099 Micromonas commoda HOM05D001499 ORTHO05D001560 3.5e-08 62.0 52 50.0
Haze_19836 Corylus avellana HOM05D001499 ORTHO05D001560 1.8e-07 59.7 38 76.3
CSS0041412 Camellia sinensis var. sinensis HOM05D001499 ORTHO05D001560 2.3e-07 59.3 33 84.8
CSS0022924 Camellia sinensis var. sinensis HOM05D001499 ORTHO05D001560 3.0e-07 58.9 31 87.1
QL09p049747 Quercus lobata HOM05D000058 ORTHO05D000255 3.9e-07 58.5 49 63.3
Sc13g0001640 Simmondsia chinensis HOM05D001499 ORTHO05D001560 3.9e-07 58.5 51 54.9
Sabra06G0026000 Salix brachista HOM05D001499 ORTHO05D030935 1.1e-06 57.0 37 75.7
Actinidia22803 Actinidia chinensis HOM05D001499 ORTHO05D030935 1.5e-06 56.6 37 73.0
Actinidia09316 Actinidia chinensis HOM05D001499 ORTHO05D001560 2.5e-06 55.8 38 68.4
Psat6g120920 Pisum sativum HOM05D001499 ORTHO05D001560 4.3e-06 55.1 30 83.3
Psat6g120840 Pisum sativum HOM05D001499 ORTHO05D001560 5.6e-06 54.7 30 80.0


User provided reference genes

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