Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p000753 Quercus lobata HOM05D002737 ORTHO05D005828 9.1e-50 200.3 129 100.0
QL07p000712 Quercus lobata HOM05D002737 ORTHO05D005828 3.7e-27 125.2 103 95.1
CiPaw.14G096400 Carya illinoinensis HOM05D002737 ORTHO05D005828 6.1e-22 107.8 99 71.7
Haze_23327 Corylus avellana HOM05D002737 ORTHO05D005828 5.2e-21 104.8 99 72.7
Haze_00729 Corylus avellana HOM05D002737 ORTHO05D005828 4.4e-20 101.7 99 57.6
Nitab4.5_0000893g0040 Nicotiana tabacum HOM05D002737 ORTHO05D005828 5.7e-20 101.3 99 54.5
Nitab4.5_0001135g0150 Nicotiana tabacum HOM05D002737 ORTHO05D005828 5.7e-20 101.3 99 54.5
Haze_00725 Corylus avellana HOM05D002737 ORTHO05D005828 2.2e-19 99.4 99 56.6
MD15G1329700 Malus domestica HOM05D002737 ORTHO05D005828 4.9e-19 98.2 58 84.5
Solyc11g068870.2 Solanum lycopersicum HOM05D002737 ORTHO05D005828 1.4e-18 96.7 99 57.6
Sopen11g027560 Solanum pennellii HOM05D002737 ORTHO05D005828 1.4e-18 96.7 99 57.6
PGSC0003DMG400019621 Solanum tuberosum HOM05D002737 ORTHO05D005828 1.4e-18 96.7 99 54.5
CAN.G745.41 Capsicum annuum HOM05D002737 ORTHO05D005828 3.2e-18 95.5 99 53.5
MD01G1023000 Malus domestica HOM05D002737 ORTHO05D005828 2.0e-17 92.8 58 79.3
Prupe.6G178500 Prunus persica HOM05D002737 ORTHO05D005828 2.7e-17 92.4 57 78.9
Oeu049293.2 Olea europaea HOM05D002737 ORTHO05D005828 3.5e-17 92.0 94 56.4
RcHm_v2.0_Chr2g0115601 Rosa chinensis HOM05D002737 ORTHO05D005828 1.0e-16 90.5 57 77.2
Actinidia24240 Actinidia chinensis HOM05D002737 ORTHO05D005828 1.3e-16 90.1 94 54.3
COL.COLO4_22657 Corchorus olitorius HOM05D002737 ORTHO05D005828 1.3e-16 90.1 105 72.4
Thecc.09G275600 Theobroma cacao HOM05D002737 ORTHO05D005828 1.7e-16 89.7 96 56.2
ClCG01G011660 Citrullus lanatus HOM05D002737 ORTHO05D005828 2.3e-16 89.4 57 75.4
MELO3C003924.2 Cucumis melo HOM05D002737 ORTHO05D005828 2.3e-16 89.4 57 75.4
ECA248G3131 Erigeron canadensis HOM05D002737 ORTHO05D005828 2.3e-16 89.4 94 53.2
FvH4_1g21730 Fragaria vesca HOM05D002737 ORTHO05D005828 2.3e-16 89.4 57 75.4
FAN19G0045 Fragaria x ananassa HOM05D002737 ORTHO05D005828 2.3e-16 89.4 57 75.4
FAN23G1354 Fragaria x ananassa HOM05D002737 ORTHO05D005828 2.3e-16 89.4 57 75.4
FAN28G1974 Fragaria x ananassa HOM05D002737 ORTHO05D005828 2.3e-16 89.4 57 75.4
Lsat_1_v5_gn_5_176321 Lactuca sativa HOM05D002737 ORTHO05D005828 2.3e-16 89.4 94 63.8
TWI77G0520 Tripterygium wilfordii HOM05D002737 ORTHO05D005828 2.3e-16 89.4 96 55.2
Hund18792 Selenicereus undatus HOM05D002737 ORTHO05D005828 3.0e-16 89.0 94 57.4
Duzib168G0210 Durio zibethinus HOM05D002737 ORTHO05D005828 3.9e-16 88.6 57 73.7
Aa31LG5G8680 Aethionema arabicum HOM05D002737 ORTHO05D005828 5.0e-16 88.2 94 53.2
Peaxi162Scf01324g00241 Petunia axillaris HOM05D002737 ORTHO05D005828 5.0e-16 88.2 58 75.9
TWI79G0303 Tripterygium wilfordii HOM05D002737 ORTHO05D005828 5.0e-16 88.2 57 75.4
CSS0011545 Camellia sinensis var. sinensis HOM05D002737 ORTHO05D005828 6.6e-16 87.8 94 51.1
CSS0011939 Camellia sinensis var. sinensis HOM05D002737 ORTHO05D005828 6.6e-16 87.8 94 55.3
CsaV3_2G009130 Cucumis sativus L. HOM05D002737 ORTHO05D005828 6.6e-16 87.8 57 73.7
Dinv17085 Davidia involucrata HOM05D002737 ORTHO05D005828 6.6e-16 87.8 57 75.4
Duzib150G0779 Durio zibethinus HOM05D002737 ORTHO05D005828 6.6e-16 87.8 57 75.4
Sed0023461 Sechium edule HOM05D002737 ORTHO05D005828 6.6e-16 87.8 57 73.7
Ah.10g032410 Amaranthus hybridus HOM05D002737 ORTHO05D005828 8.6e-16 87.4 99 49.5
FAN26G0444 Fragaria x ananassa HOM05D002737 ORTHO05D005828 8.6e-16 87.4 57 75.4
EL10Ac7g17115 Beta vulgaris HOM05D002737 ORTHO05D005828 1.1e-15 87.0 57 71.9
Carub.0004s0789 Capsella rubella HOM05D002737 ORTHO05D005828 1.9e-15 86.3 57 73.7
Sp4g10090 Schrenkiella parvula HOM05D002737 ORTHO05D005828 1.9e-15 86.3 94 52.1
AL4G21200 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 2.5e-15 85.9 94 51.1
Potri.009G162500 Populus trichocarpa HOM05D002737 ORTHO05D005828 2.5e-15 85.9 57 75.4
Thhalv10002052m.g Eutrema salsugineum HOM05D002737 ORTHO05D005828 3.3e-15 85.5 94 57.4
vmacro06935 Vaccinium macrocarpon HOM05D002737 ORTHO05D005828 3.3e-15 85.5 85 54.1
Actinidia07271 Actinidia chinensis HOM05D002737 ORTHO05D005828 4.3e-15 85.1 57 71.9
Manes.01G182101 Manihot esculenta HOM05D002737 ORTHO05D005828 4.3e-15 85.1 57 75.4
Gohir.D07G115800 Gossypium hirsutum HOM05D002737 ORTHO05D005828 5.6e-15 84.7 94 69.1
Rhsim13G0195300 Rhododendron simsii HOM05D002737 ORTHO05D005828 5.6e-15 84.7 57 73.7
Sc12g0004790 Simmondsia chinensis HOM05D002737 ORTHO05D005828 5.6e-15 84.7 57 75.4
vmacro03959 Vaccinium macrocarpon HOM05D002737 ORTHO05D005828 7.3e-15 84.3 57 71.9
Gohir.A07G112300 Gossypium hirsutum HOM05D002737 ORTHO05D005828 9.5e-15 84.0 94 72.3
Hma1.2p1_0793F.1_g218640 Hydrangea macrophylla HOM05D002737 ORTHO05D005828 9.5e-15 84.0 94 67.0
Lalb_Chr06g0164021 Lupinus albus HOM05D002737 ORTHO05D005828 9.5e-15 84.0 57 68.4
Gorai.001G124100 Gossypium raimondii HOM05D002737 ORTHO05D005828 1.2e-14 83.6 99 65.7
Sabra15G0053400 Salix brachista HOM05D002737 ORTHO05D005828 1.2e-14 83.6 74 60.8
Sabra15G0053700 Salix brachista HOM05D002737 ORTHO05D005828 1.2e-14 83.6 74 60.8
GSVIVG01036054001 Vitis vinifera HOM05D002737 ORTHO05D005828 1.2e-14 83.6 94 50.0
AT2G27285 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 3.6e-14 82.0 94 48.9
CARHR119810 Cardamine hirsuta HOM05D002737 ORTHO05D005828 4.7e-14 81.6 57 70.2
Ca_06383_v3 Cicer arietinum L. HOM05D001458 ORTHO05D007170 4.7e-14 81.6 57 68.4
Ca_29964_v3 Cicer arietinum L. HOM05D001458 ORTHO05D007170 4.7e-14 81.6 57 68.4
Lalb_Chr02g0143691 Lupinus albus HOM05D002737 ORTHO05D005828 4.7e-14 81.6 57 68.4
MBI01_g04520_MAGBIO Magnolia biondii HOM05D002737 ORTHO05D005828 4.7e-14 81.6 57 70.2
Psat2g008640 Pisum sativum HOM05D002737 ORTHO05D005828 6.2e-14 81.3 57 68.4
BcaB06g28137 Brassica carinata HOM05D002737 ORTHO05D005828 8.0e-14 80.9 94 48.9
Lj7A589T65 Lonicera japonica HOM05D002737 ORTHO05D005828 8.0e-14 80.9 57 70.2
Glyma.10G288000 Glycine max HOM05D002737 ORTHO05D005828 1.1e-13 80.5 57 68.4
arahy.Tifrunner.gnm1.ann1.4SNC56 Arachis hypogaea HOM05D002737 ORTHO05D005828 1.4e-13 80.1 57 66.7
arahy.Tifrunner.gnm1.ann1.AGV1MP Arachis hypogaea HOM05D002737 ORTHO05D005828 1.4e-13 80.1 57 66.7
Eucgr.J00541 Eucalyptus grandis HOM05D002737 ORTHO05D005828 1.4e-13 80.1 57 66.7
Glyma.20G101200 Glycine max HOM05D002737 ORTHO05D005828 1.4e-13 80.1 57 66.7
Sabra15G0046000 Salix brachista HOM05D002737 ORTHO05D005828 1.4e-13 80.1 57 70.2
Sabra15G0048200 Salix brachista HOM05D002737 ORTHO05D005828 1.4e-13 80.1 57 70.2
TPR.G14160 Trifolium pratense HOM05D002737 ORTHO05D005828 1.4e-13 80.1 57 66.7
Medtr5g095010 Medicago truncatula HOM05D002737 ORTHO05D005828 1.8e-13 79.7 57 64.9
SGA_v2.0_scaffold114G31961 Striga asiatica HOM05D002737 ORTHO05D005828 1.8e-13 79.7 94 51.1
THA.LOC104826443 Tarenaya hassleriana HOM05D002737 ORTHO05D005828 1.8e-13 79.7 94 47.9
BcaC02g08257 Brassica carinata HOM05D002737 ORTHO05D005828 3.1e-13 79.0 94 50.0
A04p20820 Brassica napus HOM05D002737 ORTHO05D005828 3.1e-13 79.0 94 50.0
C04p56640 Brassica napus HOM05D002737 ORTHO05D005828 3.1e-13 79.0 94 50.0
BraA04t17655Z Brassica rapa HOM05D002737 ORTHO05D005828 3.1e-13 79.0 94 50.0
CSS0037550 Camellia sinensis var. sinensis HOM05D002737 ORTHO05D005828 3.1e-13 79.0 59 64.4
SGA_v2.0_scaffold7G03980 Striga asiatica HOM05D002737 ORTHO05D005828 4.0e-13 78.6 94 47.9
Nn6g34744 Nelumbo nucifera HOM05D002737 ORTHO05D005828 5.2e-13 78.2 57 64.9
CANSAT64G0180 Cannabis sativa HOM05D002737 ORTHO05D005828 6.8e-13 77.8 57 66.7
VMungo0720G0453 Vigna mungo HOM05D002737 ORTHO05D005828 8.9e-13 77.4 82 52.4
MSTRG.21020 Avicennia marina HOM05D002737 ORTHO05D005828 1.2e-12 77.0 57 70.2
Ciclev10028821m.g Citrus clementina HOM05D002737 ORTHO05D005828 1.2e-12 77.0 56 66.1
Lj5g0022679 Lotus japonicus HOM05D002737 ORTHO05D005828 1.2e-12 77.0 82 50.0
CDE08G0429 Ceratophyllum demersum HOM05D002737 ORTHO05D003752 1.5e-12 76.6 94 50.0
Cc01_g08470 Coffea canephora HOM05D002737 ORTHO05D005828 1.5e-12 76.6 57 64.9
Lj5g0011855 Lotus japonicus HOM05D002737 ORTHO05D005828 1.5e-12 76.6 57 61.4
Phvul.007G013400 Phaseolus vulgaris HOM05D002737 ORTHO05D005828 1.5e-12 76.6 57 64.9
AL4G21190 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 2.0e-12 76.3 93 46.2
CDE06G1256 Ceratophyllum demersum HOM05D002737 ORTHO05D005828 2.6e-12 75.9 57 61.4
DCAR_003399 Daucus carota HOM05D002737 ORTHO05D005828 5.8e-12 74.7 57 66.7
BolC4t27191H Brassica oleracea HOM05D002737 ORTHO05D005828 9.8e-12 73.9 54 70.4
Migut.D02412 Erythranthe guttata HOM05D002737 ORTHO05D005828 9.8e-12 73.9 57 64.9
Carub.0004s0788 Capsella rubella HOM05D002737 ORTHO05D005828 1.3e-11 73.6 93 44.1
SEGI_17121 Sequoiadendron giganteum HOM05D002737 ORTHO05D005828 1.3e-11 73.6 57 64.9
Sabra15G0059900 Salix brachista HOM05D002737 ORTHO05D005828 2.2e-11 72.8 64 62.5
unitig_88.g27805 Utricularia gibba HOM05D002737 ORTHO05D002121 2.9e-11 72.4 57 63.2
PSO063G0569 Papaver somniferum HOM05D002737 ORTHO05D005828 3.7e-11 72.0 96 40.6
AT1G55928 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 1.1e-10 70.5 56 64.3
QL07p000775 Quercus lobata HOM05D002737 ORTHO05D005828 1.9e-10 69.7 100 46.0
Aqoxy4G02622 Aquilegia oxysepala HOM05D002737 ORTHO05D005828 2.4e-10 69.3 102 41.2
PGR119G1771 Punica granatum HOM05D002737 ORTHO05D005828 2.4e-10 69.3 94 46.8
HPP92_021234 Vanilla planifolia HOM05D002737 ORTHO05D005828 4.1e-10 68.6 94 68.1
Atru.chr3.3139 Acer truncatum HOM05D002737 ORTHO05D005828 1.2e-09 67.0 62 56.5
ATR0807G231 Amborella trichopoda HOM05D002737 ORTHO05D005828 1.2e-09 67.0 57 56.1
AagrBONN_evm.TU.Sc2ySwM_368.3225 Anthoceros agrestis HOM05D002737 ORTHO05D005828 1.6e-09 66.6 57 56.1
arahy.Tifrunner.gnm1.ann1.G9FM3T Arachis hypogaea HOM05D002737 ORTHO05D005828 2.0e-09 66.2 57 54.4
Peaxi162Scf00010g03312 Petunia axillaris HOM05D002737 ORTHO05D005828 2.0e-09 66.2 40 77.5
Peaxi162Scf01010g00216 Petunia axillaris HOM05D002737 ORTHO05D005828 2.0e-09 66.2 40 77.5
TAR268G0004 Trochodendron aralioides HOM05D002737 ORTHO05D005828 2.0e-09 66.2 52 59.6
AL1G53070 Arabidopsis lyrata HOM05D002737 ORTHO05D005828 1.0e-08 63.9 56 57.1
Pp3c10_11700 Physcomitrium patens HOM05D002737 ORTHO05D005828 1.0e-08 63.9 57 52.6
Peaxi162Scf00010g03410 Petunia axillaris HOM05D002737 ORTHO05D005828 1.7e-08 63.2 40 75.0
AT2G27280 Arabidopsis thaliana HOM05D002737 ORTHO05D005828 1.9e-07 59.7 46 60.9
arahy.Tifrunner.gnm1.ann1.K04YXN Arachis hypogaea HOM05D002737 ORTHO05D023756 2.5e-07 59.3 42 64.3
Sabra09G0126900 Salix brachista HOM05D002737 ORTHO05D005828 5.6e-07 58.2 47 61.7
Gohir.D05G081600 Gossypium hirsutum HOM05D002737 ORTHO05D005828 1.2e-06 57.0 54 57.4
Mapoly0024s0122 Marchantia polymorpha HOM05D002737 ORTHO05D005828 2.8e-06 55.8 57 49.1


User provided reference genes

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