Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL07p000577 Quercus lobata HOM05D007137 ORTHO05D008982 9.3e-127 456.8 222 100.0
Cfa016812 Carpinus fangiana HOM05D007137 ORTHO05D008982 2.1e-94 349.4 218 76.6
CiPaw.09G038400 Carya illinoinensis HOM05D007137 ORTHO05D008982 1.1e-92 343.6 223 75.3
Haze_19852 Corylus avellana HOM05D007137 ORTHO05D008982 1.8e-90 336.3 205 78.5
Ciclev10005859m.g Citrus clementina HOM05D007137 ORTHO05D008982 3.1e-90 335.5 213 76.1
Potri.006G051500 Populus trichocarpa HOM05D007137 ORTHO05D008982 2.1e-86 322.8 205 74.6
Actinidia09328 Actinidia chinensis HOM05D007137 ORTHO05D008982 7.9e-86 320.9 207 72.5
TWI74G1615 Tripterygium wilfordii HOM05D007137 ORTHO05D008982 3.9e-85 318.5 212 72.2
CANSAT80G0539 Cannabis sativa HOM05D007137 ORTHO05D008982 1.1e-84 317.0 219 72.1
CANSAT80G1960 Cannabis sativa HOM05D007137 ORTHO05D008982 2.0e-84 316.2 219 72.1
Sc13g0001720 Simmondsia chinensis HOM05D007137 ORTHO05D008982 2.0e-84 316.2 203 70.9
Duzib093G1775 Durio zibethinus HOM05D007137 ORTHO05D008982 2.6e-84 315.8 219 69.4
vmacro07849 Vaccinium macrocarpon HOM05D007137 ORTHO05D008982 4.4e-84 315.1 223 70.9
Rhsim03G0024800 Rhododendron simsii HOM05D007137 ORTHO05D008982 5.7e-84 314.7 224 70.1
Dinv39605 Davidia involucrata HOM05D007137 ORTHO05D008982 7.4e-84 314.3 218 70.2
Thecc.05G153200 Theobroma cacao HOM05D007137 ORTHO05D008982 1.7e-83 313.2 204 74.0
PGR004G0226 Punica granatum HOM05D007137 ORTHO05D008982 8.2e-83 310.8 202 71.8
TAR369G0818 Trochodendron aralioides HOM05D007137 ORTHO05D008982 8.2e-83 310.8 222 67.1
CSS0026997 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 1.2e-81 307.0 204 72.1
Gohir.A09G122000 Gossypium hirsutum HOM05D007137 ORTHO05D008982 1.6e-81 306.6 223 68.2
Hma1.2p1_2002F.1_g310780 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 1.6e-81 306.6 205 70.2
Rhsim03G0024600 Rhododendron simsii HOM05D007137 ORTHO05D008982 1.6e-81 306.6 224 68.3
Gohir.D09G118100 Gossypium hirsutum HOM05D007137 ORTHO05D008982 3.5e-81 305.4 223 68.2
Gorai.006G136400 Gossypium raimondii HOM05D007137 ORTHO05D008982 3.5e-81 305.4 223 68.2
MD12G1074200 Malus domestica HOM05D007137 ORTHO05D008982 3.5e-81 305.4 225 66.2
EL10Ac3g07093 Beta vulgaris HOM05D007137 ORTHO05D008982 1.0e-80 303.9 199 72.4
Prupe.7G059700 Prunus persica HOM05D007137 ORTHO05D008982 2.9e-80 302.4 221 66.1
MSTRG.6429 Avicennia marina HOM05D007137 ORTHO05D008982 1.1e-79 300.4 221 66.5
Phvul.007G252600 Phaseolus vulgaris HOM05D007137 ORTHO05D008982 1.9e-79 299.7 203 69.5
Thhalv10017217m.g Eutrema salsugineum HOM05D007137 ORTHO05D008982 2.5e-79 299.3 203 66.5
AUR62026042 Chenopodium quinoa HOM05D007137 ORTHO05D008982 3.2e-79 298.9 212 67.5
AUR62024453 Chenopodium quinoa HOM05D007137 ORTHO05D008982 9.4e-79 297.4 199 69.3
THA.LOC104818226 Tarenaya hassleriana HOM05D007137 ORTHO05D008982 1.2e-78 297.0 219 63.9
Migut.J01757 Erythranthe guttata HOM05D007137 ORTHO05D008982 1.6e-78 296.6 225 63.1
Nitab4.5_0010636g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 2.1e-78 296.2 203 67.5
Sabra06G0036100 Salix brachista HOM05D007137 ORTHO05D008982 2.1e-78 296.2 205 70.2
Carub.0004s2404 Capsella rubella HOM05D007137 ORTHO05D008982 3.6e-78 295.4 203 65.0
Glyma.10G097900 Glycine max HOM05D007137 ORTHO05D008982 4.7e-78 295.0 203 70.0
Lsat_1_v5_gn_9_29000 Lactuca sativa HOM05D007137 ORTHO05D008982 4.7e-78 295.0 219 65.8
AL4G40070 Arabidopsis lyrata HOM05D007137 ORTHO05D008982 6.1e-78 294.7 203 66.0
FAN09G1348 Fragaria x ananassa HOM05D007137 ORTHO05D008982 6.1e-78 294.7 225 64.9
AT2G41760 Arabidopsis thaliana HOM05D007137 ORTHO05D008982 8.0e-78 294.3 203 66.5
Cc06_g17570 Coffea canephora HOM05D007137 ORTHO05D008982 4.0e-77 292.0 225 63.1
FAN05G2215 Fragaria x ananassa HOM05D007137 ORTHO05D008982 4.0e-77 292.0 226 63.7
Sp4g24030 Schrenkiella parvula HOM05D007137 ORTHO05D008982 5.2e-77 291.6 203 65.5
GSVIVG01033260001 Vitis vinifera HOM05D007137 ORTHO05D008982 6.7e-77 291.2 205 65.4
Lalb_Chr21g0316491 Lupinus albus HOM05D007137 ORTHO05D008982 8.8e-77 290.8 204 67.6
PGSC0003DMG400027277 Solanum tuberosum HOM05D007137 ORTHO05D008982 8.8e-77 290.8 225 62.2
Sopen04g007840 Solanum pennellii HOM05D007137 ORTHO05D008982 1.5e-76 290.0 199 66.8
Lj5g0009390 Lotus japonicus HOM05D007137 ORTHO05D008982 2.0e-76 289.7 200 69.5
CARHR136840 Cardamine hirsuta HOM05D007137 ORTHO05D008982 2.6e-76 289.3 203 64.5
Nitab4.5_0005195g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 2.6e-76 289.3 203 66.0
Peaxi162Scf00130g00019 Petunia axillaris HOM05D007137 ORTHO05D008982 3.3e-76 288.9 214 63.6
FvH4_6g23850 Fragaria vesca HOM05D007137 ORTHO05D008982 4.4e-76 288.5 225 63.1
RcHm_v2.0_Chr3g0482531 Rosa chinensis HOM05D007137 ORTHO05D008982 4.4e-76 288.5 226 63.7
Sed0021909 Sechium edule HOM05D007137 ORTHO05D008982 5.7e-76 288.1 223 63.2
Oeu008913.1 Olea europaea HOM05D007137 ORTHO05D008982 7.5e-76 287.7 216 65.7
Oeu008915.1 Olea europaea HOM05D007137 ORTHO05D008982 7.5e-76 287.7 216 65.7
Solyc04g015760.4 Solanum lycopersicum HOM05D007137 ORTHO05D008982 7.5e-76 287.7 199 66.3
TPR.G10636 Trifolium pratense HOM05D007137 ORTHO05D008982 7.5e-76 287.7 206 67.5
Hund24707 Selenicereus undatus HOM05D007137 ORTHO05D008982 9.7e-76 287.3 208 66.3
MELO3C009672.2 Cucumis melo HOM05D007137 ORTHO05D008982 1.3e-75 287.0 222 64.0
Atru.BG.154.p Acer truncatum HOM05D007137 ORTHO05D008982 4.8e-75 285.0 209 68.9
CsaV3_3G039290 Cucumis sativus L. HOM05D007137 ORTHO05D008982 4.8e-75 285.0 222 63.5
Ca_26019_v3 Cicer arietinum L. HOM05D007137 ORTHO05D008982 6.3e-75 284.6 212 65.6
Nn2g15218 Nelumbo nucifera HOM05D007137 ORTHO05D008982 1.4e-74 283.5 217 60.4
Medtr7g034355 Medicago truncatula HOM05D007137 ORTHO05D008982 2.4e-74 282.7 200 66.5
Aqoxy1G00329 Aquilegia oxysepala HOM05D007137 ORTHO05D008982 4.1e-74 282.0 205 63.4
C03p27930 Brassica napus HOM05D007137 ORTHO05D008982 1.2e-73 280.4 212 60.4
A03p23410 Brassica napus HOM05D007137 ORTHO05D008982 2.7e-73 279.3 217 59.9
BraA03t11558Z Brassica rapa HOM05D007137 ORTHO05D008982 2.7e-73 279.3 217 59.9
HanXRQChr15g0491151 Helianthus annuus HOM05D007137 ORTHO05D008982 2.7e-73 279.3 209 64.1
Eucgr.A02346 Eucalyptus grandis HOM05D007137 ORTHO05D008982 1.0e-72 277.3 199 65.8
BolC3t15165H Brassica oleracea HOM05D007137 ORTHO05D008982 2.9e-72 275.8 224 57.1
ECA247G4023 Erigeron canadensis HOM05D007137 ORTHO05D008982 4.2e-71 271.9 224 60.3
CAN.G1456.1 Capsicum annuum HOM05D007137 ORTHO05D008982 1.0e-69 267.3 185 65.9
arahy.Tifrunner.gnm1.ann1.QC7DP1 Arachis hypogaea HOM05D007137 ORTHO05D008982 1.4e-69 266.9 213 61.0
Ah.04g151610 Amaranthus hybridus HOM05D000942 ORTHO05D000918 7.5e-68 261.2 195 65.1
PSO384G0937 Papaver somniferum HOM05D007137 ORTHO05D008982 1.7e-67 260.0 216 60.2
Manes.09G022100 Manihot esculenta HOM05D007137 ORTHO05D008982 1.4e-66 256.9 199 64.3
arahy.Tifrunner.gnm1.ann1.F03MXT Arachis hypogaea HOM05D007137 ORTHO05D008982 3.1e-66 255.8 193 63.7
Cpa.g.sc92.53 Carica papaya HOM05D007137 ORTHO05D008982 3.5e-65 252.3 174 70.1
CAN.G676.70 Capsicum annuum HOM05D007137 ORTHO05D008982 1.3e-64 250.4 191 61.3
MBI17_g01631_MAGBIO Magnolia biondii HOM05D007137 ORTHO05D008982 1.6e-62 243.4 219 53.4
Lju124C41G12 Lonicera japonica HOM05D007137 ORTHO05D008982 2.1e-62 243.0 187 64.2
SalBow6G6768 Salvia bowleyana HOM05D007137 ORTHO05D008982 3.6e-62 242.3 242 54.1
Psat6g120120 Pisum sativum HOM05D007137 ORTHO05D008982 1.8e-61 240.0 161 70.2
Aa31LG1G23770 Aethionema arabicum HOM05D007137 ORTHO05D008982 6.8e-61 238.0 174 63.8
HPP92_001018 Vanilla planifolia HOM05D007137 ORTHO05D008982 1.7e-59 233.4 210 52.9
SGA_v2.0_scaffold105G30410 Striga asiatica HOM05D007137 ORTHO05D008982 1.8e-58 229.9 177 61.6
Os05g0387900 Oryza sativa ssp. japonica HOM05D007137 ORTHO05D008982 2.4e-58 229.6 203 55.2
DCAR_020492 Daucus carota HOM05D007137 ORTHO05D008982 5.0e-56 221.9 160 68.8
ATR0320G015 Amborella trichopoda HOM05D007137 ORTHO05D008982 2.5e-55 219.5 201 50.2
CSS0041211 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 2.8e-54 216.1 169 64.5
CDE02G1742 Ceratophyllum demersum HOM05D007137 ORTHO05D008982 1.0e-53 214.2 169 58.6
ClCG10G017100 Citrullus lanatus HOM05D007137 ORTHO05D008982 1.8e-50 203.4 240 47.9
Mapoly0062s0037 Marchantia polymorpha HOM05D007137 ORTHO05D008982 4.6e-49 198.7 199 49.2
Pp3c8_16370 Physcomitrium patens HOM05D007137 ORTHO05D008982 5.9e-49 198.4 176 51.7
FAN02G0118 Fragaria x ananassa HOM05D007137 ORTHO05D008982 4.7e-46 188.7 133 69.2
Hma1.2p1_2520F.1_g323835 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 3.5e-41 172.6 105 75.2
SMO353G0157 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 3.5e-41 172.6 198 46.5
SMO302G0006 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 3.0e-40 169.5 210 44.3
Rhsim03G0024200 Rhododendron simsii HOM05D007137 ORTHO05D008982 4.3e-31 139.0 160 48.8
VMungo0720G0821 Vigna mungo HOM05D007137 ORTHO05D008982 2.1e-25 120.2 97 58.8
CSS0024811 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 2.5e-23 113.2 94 57.4
Zm00001eb286980 Zea mays HOM05D007137 ORTHO05D008982 3.8e-19 99.4 75 56.0
CBR_g39180 Chara braunii HOM05D007137 ORTHO05D008982 2.4e-18 96.7 97 43.3
SEGI_00420 Sequoiadendron giganteum HOM05D007137 ORTHO05D008982 7.8e-17 91.7 88 47.7
Cre04.g217912 Chlamydomonas reinhardtii HOM05D007137 ORTHO05D008982 3.4e-12 76.3 92 41.3
Rhsim03G0024500 Rhododendron simsii HOM05D007137 ORTHO05D008982 1.9e-07 60.5 48 64.6


User provided reference genes

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