Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p053818 Quercus lobata HOM05D003687 ORTHO05D004571 2.2e-73 278.9 139 100.0
QL06p052753 Quercus lobata HOM05D003687 ORTHO05D007223 4.2e-69 264.6 137 95.6
QL06p052765 Quercus lobata HOM05D000009 ORTHO05D000008 7.2e-61 237.3 137 89.8
QL06p053814 Quercus lobata HOM05D003687 ORTHO05D004571 9.4e-61 236.9 131 90.8
QL06p053788 Quercus lobata HOM05D003687 ORTHO05D004571 3.6e-60 235.0 163 77.3
QL06p052789 Quercus lobata HOM05D003687 ORTHO05D004571 1.0e-59 233.4 163 76.7
RcHm_v2.0_Chr2g0097441 Rosa chinensis HOM05D003687 ORTHO05D004571 4.9e-57 224.6 163 73.0
Manes.02G112800 Manihot esculenta HOM05D003687 ORTHO05D004571 8.3e-57 223.8 163 73.6
Phvul.002G115000 Phaseolus vulgaris HOM05D003687 ORTHO05D004571 2.4e-56 222.2 163 72.4
Lalb_Chr16g0377261 Lupinus albus HOM05D003687 ORTHO05D004571 3.1e-56 221.9 163 73.0
TPR.G18309 Trifolium pratense HOM05D003687 ORTHO05D004571 4.1e-56 221.5 163 71.8
FvH4_1g10530 Fragaria vesca HOM05D003687 ORTHO05D004571 5.4e-56 221.1 163 71.8
FAN19G1222 Fragaria x ananassa HOM05D003687 ORTHO05D004571 5.4e-56 221.1 163 71.8
Medtr8g074010 Medicago truncatula HOM05D003687 ORTHO05D004571 5.4e-56 221.1 163 72.4
FAN26G2468 Fragaria x ananassa HOM05D003687 ORTHO05D004571 7.0e-56 220.7 163 71.8
FAN28G1596 Fragaria x ananassa HOM05D003687 ORTHO05D004571 7.0e-56 220.7 163 71.8
TPR.G25131 Trifolium pratense HOM05D003687 ORTHO05D004571 9.1e-56 220.3 163 72.4
CANSAT25G3704 Cannabis sativa HOM05D003687 ORTHO05D004571 1.2e-55 219.9 163 72.4
Psat0s1725g0080 Pisum sativum HOM05D003687 ORTHO05D004571 1.2e-55 219.9 163 71.2
Ca_19449_v3 Cicer arietinum L. HOM05D003687 ORTHO05D004571 2.0e-55 219.2 163 71.8
FAN23G1902 Fragaria x ananassa HOM05D003687 ORTHO05D004571 2.0e-55 219.2 163 71.2
Lj2g0026838 Lotus japonicus HOM05D003687 ORTHO05D004571 2.0e-55 219.2 163 71.8
Hma1.2p1_0300F.1_g118150 Hydrangea macrophylla HOM05D003687 ORTHO05D004571 2.7e-55 218.8 163 72.4
MD15G1233200 Malus domestica HOM05D003687 ORTHO05D004571 2.7e-55 218.8 163 70.6
PSO339G2900 Papaver somniferum HOM05D003687 ORTHO05D004571 2.7e-55 218.8 163 71.8
Glyma.01G159800 Glycine max HOM05D003687 ORTHO05D004571 3.5e-55 218.4 163 71.8
Glyma.11G084400 Glycine max HOM05D003687 ORTHO05D004571 4.5e-55 218.0 163 71.8
Lalb_Chr05g0211911 Lupinus albus HOM05D003687 ORTHO05D004571 5.9e-55 217.6 163 72.4
Aa31LG8G14900 Aethionema arabicum HOM05D003687 ORTHO05D004571 7.7e-55 217.2 163 71.2
Eucgr.I02231 Eucalyptus grandis HOM05D003687 ORTHO05D004571 7.7e-55 217.2 163 71.2
PSO063G5755 Papaver somniferum HOM05D003687 ORTHO05D004571 7.7e-55 217.2 163 71.2
AT4G35630 Arabidopsis thaliana HOM05D003687 ORTHO05D004571 1.0e-54 216.9 163 70.6
CSS0042676 Camellia sinensis var. sinensis HOM05D003687 ORTHO05D004571 1.0e-54 216.9 163 71.8
Lsat_1_v5_gn_8_23040 Lactuca sativa HOM05D003687 ORTHO05D004571 1.0e-54 216.9 163 71.8
MD02G1119200 Malus domestica HOM05D003687 ORTHO05D004571 1.0e-54 216.9 163 69.9
TAR628G0600 Trochodendron aralioides HOM05D003687 ORTHO05D004571 1.0e-54 216.9 163 71.2
CiPaw.07G004000 Carya illinoinensis HOM05D003687 ORTHO05D004571 1.3e-54 216.5 163 70.6
THA.LOC104807434 Tarenaya hassleriana HOM05D003687 ORTHO05D004571 1.3e-54 216.5 163 70.6
AT2G17630 Arabidopsis thaliana HOM05D003687 ORTHO05D004571 1.7e-54 216.1 163 70.6
Thhalv10023021m.g Eutrema salsugineum HOM05D003687 ORTHO05D004571 1.7e-54 216.1 163 70.6
AL7G15520 Arabidopsis lyrata HOM05D003687 ORTHO05D004571 2.3e-54 215.7 163 69.9
Glyma.02G041900 Glycine max HOM05D003687 ORTHO05D004571 2.3e-54 215.7 163 70.6
Nitab4.5_0002967g0020 Nicotiana tabacum HOM05D003687 ORTHO05D004571 2.9e-54 215.3 163 71.2
Prupe.7G180700 Prunus persica HOM05D003687 ORTHO05D004571 2.9e-54 215.3 163 69.3
Manes.01G153800 Manihot esculenta HOM05D003687 ORTHO05D004571 3.8e-54 214.9 163 71.8
Nitab4.5_0000702g0080 Nicotiana tabacum HOM05D003687 ORTHO05D004571 3.8e-54 214.9 163 71.2
MELO3C013732.2 Cucumis melo HOM05D003687 ORTHO05D004571 5.0e-54 214.5 163 71.2
Sp7g33400 Schrenkiella parvula HOM05D003687 ORTHO05D004571 5.0e-54 214.5 163 69.9
Carub.0007s0467 Capsella rubella HOM05D003687 ORTHO05D004571 6.6e-54 214.2 163 69.9
ClCG10G000330 Citrullus lanatus HOM05D003687 ORTHO05D004571 6.6e-54 214.2 163 70.6
Cpa.g.sc535.4 Carica papaya HOM05D003687 ORTHO05D004571 8.6e-54 213.8 163 69.9
DCAR_030822 Daucus carota HOM05D003687 ORTHO05D004571 8.6e-54 213.8 163 71.8
AL3G50590 Arabidopsis lyrata HOM05D003687 ORTHO05D004571 1.1e-53 213.4 163 69.9
CARHR243980 Cardamine hirsuta HOM05D003687 ORTHO05D004571 1.1e-53 213.4 163 69.9
Thhalv10025259m.g Eutrema salsugineum HOM05D003687 ORTHO05D004571 1.1e-53 213.4 163 69.3
Lalb_Chr09g0321291 Lupinus albus HOM05D003687 ORTHO05D004571 1.1e-53 213.4 163 70.6
PGSC0003DMG400001524 Solanum tuberosum HOM05D003687 ORTHO05D004571 1.1e-53 213.4 163 69.9
THA.LOC104819724 Tarenaya hassleriana HOM05D003687 ORTHO05D004571 1.1e-53 213.4 163 70.6
Haze_03674 Corylus avellana HOM05D003687 ORTHO05D004571 1.5e-53 213.0 163 69.3
CsaV3_3G000370 Cucumis sativus L. HOM05D003687 ORTHO05D004571 1.5e-53 213.0 163 70.6
Aqoxy1G00525 Aquilegia oxysepala HOM05D003687 ORTHO05D004571 1.9e-53 212.6 163 69.9
Ca_24964_v3 Cicer arietinum L. HOM05D003687 ORTHO05D004571 1.9e-53 212.6 163 69.9
Cc07_g11670 Coffea canephora HOM05D003687 ORTHO05D004571 1.9e-53 212.6 163 69.9
PGR119G1501 Punica granatum HOM05D003687 ORTHO05D004571 1.9e-53 212.6 163 69.3
Atru.chr3.957 Acer truncatum HOM05D003687 ORTHO05D004571 2.5e-53 212.2 163 69.3
Atru.chr3.969 Acer truncatum HOM05D003687 ORTHO05D004571 2.5e-53 212.2 163 69.3
Ah.03g148400 Amaranthus hybridus HOM05D003687 ORTHO05D004571 2.5e-53 212.2 163 69.9
BraA08t34133Z Brassica rapa HOM05D003687 ORTHO05D004571 2.5e-53 212.2 163 69.3
CiPaw.08G180600 Carya illinoinensis HOM05D003687 ORTHO05D004571 2.5e-53 212.2 163 69.3
AUR62029452 Chenopodium quinoa HOM05D003687 ORTHO05D004571 2.5e-53 212.2 163 68.7
Psat2g150440 Pisum sativum HOM05D003687 ORTHO05D004571 2.5e-53 212.2 163 70.6
Solyc02g082830.3 Solanum lycopersicum HOM05D003687 ORTHO05D004571 2.5e-53 212.2 163 69.3
Sopen02g027630 Solanum pennellii HOM05D003687 ORTHO05D004571 2.5e-53 212.2 163 69.3
TWI09G0502 Tripterygium wilfordii HOM05D003687 ORTHO05D004571 2.5e-53 212.2 163 69.9
Carub.0003s3171 Capsella rubella HOM05D003687 ORTHO05D004571 3.3e-53 211.8 163 69.3
ECA233G3718 Erigeron canadensis HOM05D003687 ORTHO05D004571 3.3e-53 211.8 163 70.6
Potri.005G099900 Populus trichocarpa HOM05D003687 ORTHO05D004571 3.3e-53 211.8 163 68.7
BcaC01g00508 Brassica carinata HOM05D003687 ORTHO05D004571 4.3e-53 211.5 163 68.7
C03p80790 Brassica napus HOM05D003687 ORTHO05D004571 4.3e-53 211.5 163 68.7
BolC3t20334H Brassica oleracea HOM05D003687 ORTHO05D004571 4.3e-53 211.5 163 68.7
CAN.G890.77 Capsicum annuum HOM05D003687 ORTHO05D004571 4.3e-53 211.5 163 70.6
Cfa007065 Carpinus fangiana HOM05D003687 ORTHO05D004571 4.3e-53 211.5 163 68.7
Peaxi162Scf01446g00005 Petunia axillaris HOM05D003687 ORTHO05D004571 4.3e-53 211.5 163 69.3
Rhsim10G0197900 Rhododendron simsii HOM05D003687 ORTHO05D004571 4.3e-53 211.5 163 68.7
TAR376G1076 Trochodendron aralioides HOM05D003687 ORTHO05D004571 4.3e-53 211.5 163 69.3
A08p21800 Brassica napus HOM05D003687 ORTHO05D004571 5.6e-53 211.1 163 69.3
MBI05_g40602_MAGBIO Magnolia biondii HOM05D003687 ORTHO05D004571 5.6e-53 211.1 163 69.3
Phvul.003G269100 Phaseolus vulgaris HOM05D003687 ORTHO05D004571 5.6e-53 211.1 163 68.1
Sabra05G0082600 Salix brachista HOM05D003687 ORTHO05D004571 5.6e-53 211.1 163 68.7
Sp3g30960 Schrenkiella parvula HOM05D003687 ORTHO05D004571 5.6e-53 211.1 163 69.3
Thecc.01G007000 Theobroma cacao HOM05D003687 ORTHO05D004571 5.6e-53 211.1 163 68.7
Gorai.001G198400 Gossypium raimondii HOM05D003687 ORTHO05D004571 7.2e-53 210.7 163 69.3
Hma1.2p1_2491F.1_g323220 Hydrangea macrophylla HOM05D003687 ORTHO05D004571 7.2e-53 210.7 163 70.6
SHI29483 Sapria himalayana HOM05D003687 ORTHO05D004571 7.2e-53 210.7 164 67.1
VMungo1215G1127 Vigna mungo HOM05D003687 ORTHO05D004571 7.2e-53 210.7 162 69.8
BcaC04g22959 Brassica carinata HOM05D003687 ORTHO05D004571 9.5e-53 210.3 163 69.3
BolC9t54238H Brassica oleracea HOM05D003687 ORTHO05D004571 9.5e-53 210.3 163 69.3
Sc07g0001320 Simmondsia chinensis HOM05D003687 ORTHO05D004571 1.2e-52 209.9 163 68.1
BcaB03g12420 Brassica carinata HOM05D003687 ORTHO05D004571 1.6e-52 209.5 163 68.7
VMungo0251G3174 Vigna mungo HOM05D003687 ORTHO05D004571 1.6e-52 209.5 163 68.1
C09p13480 Brassica napus HOM05D003687 ORTHO05D004571 2.1e-52 209.1 163 68.7
Gohir.A07G170700 Gossypium hirsutum HOM05D003687 ORTHO05D004571 2.1e-52 209.1 163 68.7
BcaB07g31719 Brassica carinata HOM05D003687 ORTHO05D004571 3.6e-52 208.4 163 68.7
Ciclev10025659m.g Citrus clementina HOM05D003687 ORTHO05D004571 3.6e-52 208.4 163 67.5
Duzib147G1246 Durio zibethinus HOM05D003687 ORTHO05D004571 3.6e-52 208.4 163 68.7
Oeu028610.1 Olea europaea HOM05D003687 ORTHO05D004571 3.6e-52 208.4 163 68.1
TWI53G1012 Tripterygium wilfordii HOM05D003687 ORTHO05D004571 3.6e-52 208.4 163 68.1
MSTRG.3621 Avicennia marina HOM05D003687 ORTHO05D004571 4.7e-52 208.0 163 67.5
Gohir.D07G177500 Gossypium hirsutum HOM05D003687 ORTHO05D004571 4.7e-52 208.0 163 68.7
A09p11460 Brassica napus HOM05D003687 ORTHO05D004571 6.1e-52 207.6 163 68.7
BraA09t36786Z Brassica rapa HOM05D003687 ORTHO05D004571 1.0e-51 206.8 163 68.1
SGA_v2.0_scaffold2G00959 Striga asiatica HOM05D003687 ORTHO05D004571 1.0e-51 206.8 163 67.5
Duzib264G0784 Durio zibethinus HOM05D003687 ORTHO05D004571 1.4e-51 206.5 163 66.9
Lj4P233T12 Lonicera japonica HOM05D003687 ORTHO05D004571 1.8e-51 206.1 163 68.1
Sed0005072 Sechium edule HOM05D003687 ORTHO05D004571 2.3e-51 205.7 163 68.1
SalBow3G3833 Salvia bowleyana HOM05D003687 ORTHO05D004571 3.0e-51 205.3 163 66.3
COL.COLO4_22538 Corchorus olitorius HOM05D003687 ORTHO05D004571 4.0e-51 204.9 163 66.3
arahy.Tifrunner.gnm1.ann1.XW297T Arachis hypogaea HOM05D003687 ORTHO05D004571 5.2e-51 204.5 157 68.8
arahy.Tifrunner.gnm1.ann1.ZVTH8F Arachis hypogaea HOM05D003687 ORTHO05D004571 5.2e-51 204.5 157 68.8
SGA_v2.0_scaffold108G30984 Striga asiatica HOM05D003687 ORTHO05D004571 8.9e-51 203.8 163 66.3
unitig_699.g19680 Utricularia gibba HOM05D003687 ORTHO05D004571 8.9e-51 203.8 163 66.3
Aa31LG6G12590 Aethionema arabicum HOM05D003687 ORTHO05D004571 1.5e-50 203.0 163 67.5
Migut.H02194 Erythranthe guttata HOM05D003687 ORTHO05D004571 2.6e-50 202.2 163 68.1
CDE10G0952 Ceratophyllum demersum HOM05D003687 ORTHO05D004571 4.4e-50 201.4 163 66.3
SEGI_09550 Sequoiadendron giganteum HOM05D003687 ORTHO05D004571 1.8e-48 196.1 163 66.3
EL10Ac6g15469 Beta vulgaris HOM05D003687 ORTHO05D004571 2.4e-48 195.7 155 67.1
CDE10G0671 Ceratophyllum demersum HOM05D003687 ORTHO05D004571 9.2e-48 193.7 162 64.8
Actinidia17383 Actinidia chinensis HOM05D003687 ORTHO05D004571 1.3e-46 189.9 114 82.5
BcaB07g31718 Brassica carinata HOM05D003687 ORTHO05D004571 2.3e-46 189.1 163 65.6
Dinv40174 Davidia involucrata HOM05D003687 ORTHO05D004571 2.3e-46 189.1 114 83.3
Os03g0157900 Oryza sativa ssp. japonica HOM05D003687 ORTHO05D004571 5.0e-46 188.0 164 62.8
ATR0329G002 Amborella trichopoda HOM05D003687 ORTHO05D004571 8.6e-46 187.2 163 62.0
HPP92_002248 Vanilla planifolia HOM05D003687 ORTHO05D004571 1.1e-45 186.8 163 61.3
FAN26G0112 Fragaria x ananassa HOM05D003687 ORTHO05D004571 1.0e-43 180.3 103 85.4
CSS0005640 Camellia sinensis var. sinensis HOM05D003687 ORTHO05D004571 1.8e-43 179.5 137 70.1
SMO259G0019 Selaginella moellendorffii HOM05D003687 ORTHO05D004571 1.8e-43 179.5 163 57.7
Zm00001eb004390 Zea mays HOM05D003687 ORTHO05D004571 4.0e-43 178.3 164 60.4
CBR_g34176 Chara braunii HOM05D003687 ORTHO05D004571 5.2e-43 177.9 163 58.9
Mapoly0033s0118 Marchantia polymorpha HOM05D003687 ORTHO05D004571 5.2e-43 177.9 162 57.4
CBR_g54970 Chara braunii HOM05D003687 ORTHO05D004571 1.5e-42 176.4 163 58.3
Pp3c9_15390 Physcomitrium patens HOM05D003687 ORTHO05D004571 1.3e-41 173.3 162 57.4
QL06p052757 Quercus lobata HOM05D003687 ORTHO05D004571 1.7e-41 172.9 138 69.6
vmacro20525 Vaccinium macrocarpon HOM05D003687 ORTHO05D004571 3.2e-40 168.7 138 66.7
MBI05_g22625_MAGBIO Magnolia biondii HOM05D003687 ORTHO05D004571 6.0e-39 164.5 99 82.8
PRCOL_00000472 Prasinoderma coloniale HOM05D003687 ORTHO05D004571 4.7e-36 154.8 163 49.7
Cre07.g331550 Chlamydomonas reinhardtii HOM05D003687 ORTHO05D004571 1.8e-35 152.9 164 52.4
Dinv09926 Davidia involucrata HOM05D003687 ORTHO05D004571 1.5e-34 149.8 114 69.3
Dinv17413 Davidia involucrata HOM05D003687 ORTHO05D004571 1.5e-34 149.8 114 69.3
ATR0553G001 Amborella trichopoda HOM05D003687 ORTHO05D004571 3.4e-34 148.7 137 59.1
Dinv37828 Davidia involucrata HOM05D003687 ORTHO05D004571 1.4e-32 143.3 114 67.5
Dinv29031 Davidia involucrata HOM05D003687 ORTHO05D034002 3.2e-32 142.1 109 68.8
MCO11G731 Micromonas commoda HOM05D003687 ORTHO05D004571 1.0e-30 137.1 163 48.5
Dinv34003 Davidia involucrata HOM05D003687 ORTHO05D004571 8.1e-28 127.5 89 71.9
GSVIVG01006497001 Vitis vinifera HOM05D003687 ORTHO05D004571 4.3e-21 105.1 163 44.2
Haze_26462 Corylus avellana HOM05D003687 ORTHO05D004571 3.6e-20 102.1 167 36.5
SEGI_08881 Sequoiadendron giganteum HOM05D003687 ORTHO05D004571 6.8e-19 97.8 79 60.8
BcaB07g31714 Brassica carinata HOM05D003687 ORTHO05D004571 1.2e-18 97.1 106 58.5
Dinv18127 Davidia involucrata HOM05D003687 ORTHO05D043272 1.9e-16 89.7 60 78.3
BraA06t26310Z Brassica rapa HOM05D003687 ORTHO05D043272 4.2e-16 88.6 62 80.6
ATR0208G001 Amborella trichopoda HOM05D003687 ORTHO05D067511 1.1e-13 80.5 60 70.0
MCO03G424 Micromonas commoda HOM05D003687 ORTHO05D049027 2.5e-13 79.3 166 28.9
PRCOL_00006694 Prasinoderma coloniale HOM05D003687 ORTHO05D049027 4.3e-13 78.6 117 39.3
SalBow2G1655 Salvia bowleyana HOM05D003687 ORTHO05D004571 4.3e-13 78.6 87 50.6
ATR0329G021 Amborella trichopoda HOM05D003687 ORTHO05D004571 5.6e-13 78.2 55 69.1
SalBow8G1645 Salvia bowleyana HOM05D003687 ORTHO05D004571 8.1e-12 74.3 87 49.4
Cfa023378 Carpinus fangiana HOM05D003687 ORTHO05D004571 6.9e-11 71.2 181 29.3
TAR371G0743 Trochodendron aralioides HOM05D003687 ORTHO05D006936 1.6e-07 60.1 44 65.9
SalBow7G3504 Salvia bowleyana HOM05D003687 ORTHO05D004571 2.1e-07 59.7 76 47.4
SalBow6G6204 Salvia bowleyana HOM05D003687 ORTHO05D004571 8.7e-06 54.3 72 44.4


User provided reference genes

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