Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p053348 Quercus lobata HOM05D007735 ORTHO05D009638 1.1e-72 276.6 140 100.0
Cfa007115 Carpinus fangiana HOM05D007735 ORTHO05D009638 2.1e-39 166.0 143 69.9
Prupe.7G187700 Prunus persica HOM05D007735 ORTHO05D009638 9.3e-32 140.6 144 61.1
Cc07_g12240 Coffea canephora HOM05D007735 ORTHO05D009638 1.6e-28 129.8 143 49.7
Thecc.01G001800 Theobroma cacao HOM05D007735 ORTHO05D009638 2.8e-28 129.0 142 59.9
TAR381G1223 Trochodendron aralioides HOM05D007735 ORTHO05D009638 1.4e-27 126.7 137 53.3
Manes.01G157700 Manihot esculenta HOM05D007735 ORTHO05D009638 5.3e-27 124.8 139 56.1
Sabra16G0309000 Salix brachista HOM05D007735 ORTHO05D009638 1.3e-25 120.2 116 59.5
Manes.02G117000 Manihot esculenta HOM05D007735 ORTHO05D009638 6.4e-25 117.9 131 56.5
Nn5g31061 Nelumbo nucifera HOM05D007735 ORTHO05D009638 1.4e-24 116.7 133 53.4
CSS0016261 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 1.9e-24 116.3 136 50.0
Potri.011G145200 Populus trichocarpa HOM05D007735 ORTHO05D009638 2.4e-24 115.9 141 51.8
Potri.001G456700 Populus trichocarpa HOM05D007735 ORTHO05D009638 1.2e-23 113.6 121 56.2
Solyc02g082240.1 Solanum lycopersicum HOM05D007735 ORTHO05D009638 2.7e-23 112.5 145 51.0
Sopen02g026900 Solanum pennellii HOM05D007735 ORTHO05D009638 3.5e-23 112.1 144 51.4
Sabra11G0130300 Salix brachista HOM05D007735 ORTHO05D009638 1.3e-22 110.2 171 46.2
PGSC0003DMG400013637 Solanum tuberosum HOM05D007735 ORTHO05D009638 2.3e-22 109.4 142 47.9
Nitab4.5_0000855g0160 Nicotiana tabacum HOM05D007735 ORTHO05D009638 6.7e-22 107.8 150 50.0
RcHm_v2.0_Chr2g0096741 Rosa chinensis HOM05D007735 ORTHO05D009638 8.7e-22 107.5 132 53.8
Sc03g0004120 Simmondsia chinensis HOM05D007735 ORTHO05D009638 8.7e-22 107.5 128 45.3
Glyma.16G114400 Glycine max HOM05D007735 ORTHO05D009638 1.1e-21 107.1 138 48.6
FvH4_1g09950 Fragaria vesca HOM05D007735 ORTHO05D009638 2.5e-21 105.9 136 52.2
FAN19G1654 Fragaria x ananassa HOM05D007735 ORTHO05D009638 2.5e-21 105.9 136 52.2
FAN23G3070 Fragaria x ananassa HOM05D007735 ORTHO05D009638 2.5e-21 105.9 136 53.7
Glyma.09G195900 Glycine max HOM05D007735 ORTHO05D009638 2.5e-21 105.9 137 48.9
CiPaw.07G000500 Carya illinoinensis HOM05D007735 ORTHO05D009638 4.3e-21 105.1 123 53.7
Peaxi162Scf00918g00052 Petunia axillaris HOM05D007735 ORTHO05D009638 1.3e-20 103.6 130 49.2
Phvul.002G119100 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 1.6e-20 103.2 134 50.0
Oeu045753.2 Olea europaea HOM05D007735 ORTHO05D009638 2.1e-20 102.8 134 44.8
Nitab4.5_0004448g0030 Nicotiana tabacum HOM05D007735 ORTHO05D009638 2.8e-20 102.4 147 48.3
FAN28G1635 Fragaria x ananassa HOM05D007735 ORTHO05D009638 4.8e-20 101.7 134 53.0
Gohir.A05G393900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 4.8e-20 101.7 137 48.9
DCAR_014121 Daucus carota HOM05D007735 ORTHO05D009638 1.1e-19 100.5 133 48.9
DCAR_014122 Daucus carota HOM05D007735 ORTHO05D009638 1.1e-19 100.5 133 48.9
Eucgr.J02566 Eucalyptus grandis HOM05D007735 ORTHO05D009638 1.1e-19 100.5 121 52.9
Gorai.012G025100 Gossypium raimondii HOM05D007735 ORTHO05D009638 1.1e-19 100.5 137 48.9
Eucgr.I02199 Eucalyptus grandis HOM05D007735 ORTHO05D009638 1.4e-19 100.1 154 41.6
VMungo1215G0699 Vigna mungo HOM05D007735 ORTHO05D009638 1.4e-19 100.1 132 47.7
Gohir.D04G020900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 1.8e-19 99.8 137 48.2
Glyma.01G156500 Glycine max HOM05D007735 ORTHO05D009638 2.4e-19 99.4 129 48.8
Glyma.11G088300 Glycine max HOM05D007735 ORTHO05D009638 1.5e-18 96.7 130 46.9
Lalb_Chr16g0380221 Lupinus albus HOM05D007735 ORTHO05D009638 3.4e-18 95.5 129 43.4
Oeu043409.2 Olea europaea HOM05D007735 ORTHO05D009638 3.4e-18 95.5 122 45.1
Lalb_Chr05g0229481 Lupinus albus HOM05D007735 ORTHO05D009638 4.5e-18 95.1 133 48.9
Cpa.g.sc6.350 Carica papaya HOM05D007735 ORTHO05D009638 5.8e-18 94.7 120 53.3
FAN26G0974 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.3e-17 93.6 124 51.6
Nitab4.5_0006309g0010 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.3e-17 93.6 123 46.3
Aqoxy6G03024 Aquilegia oxysepala HOM05D007735 ORTHO05D009638 1.7e-17 93.2 135 45.9
CSS0025501 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 1.7e-17 93.2 134 44.8
Lsat_1_v5_gn_2_74220 Lactuca sativa HOM05D007735 ORTHO05D009638 2.9e-17 92.4 120 49.2
ECA246G0225 Erigeron canadensis HOM05D007735 ORTHO05D009638 4.9e-17 91.7 133 51.1
FAN23G2983 Fragaria x ananassa HOM05D007735 ORTHO05D009638 6.5e-17 91.3 124 50.8
COL.COLO4_22568 Corchorus olitorius HOM05D007735 ORTHO05D009638 8.4e-17 90.9 139 51.1
Phvul.003G272000 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 2.5e-16 89.4 133 45.1
Psat2g147360 Pisum sativum HOM05D007735 ORTHO05D009638 3.2e-16 89.0 114 46.5
TPR.G19311 Trifolium pratense HOM05D007735 ORTHO05D009638 3.2e-16 89.0 128 46.1
VMungo0251G0553 Vigna mungo HOM05D007735 ORTHO05D009638 3.2e-16 89.0 133 46.6
Medtr8g072610 Medicago truncatula HOM05D007735 ORTHO05D009638 4.2e-16 88.6 128 46.1
Lalb_Chr05g0214991 Lupinus albus HOM05D007735 ORTHO05D009638 5.5e-16 88.2 109 48.6
TPR.G33757 Trifolium pratense HOM05D001957 ORTHO05D002015 7.1e-16 87.8 118 47.5
Sed0019252 Sechium edule HOM05D007735 ORTHO05D009638 9.3e-16 87.4 116 48.3
Nn6g31607 Nelumbo nucifera HOM05D007735 ORTHO05D009638 1.2e-15 87.0 130 43.8
Lj2g0017807 Lotus japonicus HOM05D007735 ORTHO05D009638 1.6e-15 86.7 135 43.7
Lalb_Chr09g0324871 Lupinus albus HOM05D007735 ORTHO05D009638 1.6e-15 86.7 128 44.5
Lsat_1_v5_gn_8_114101 Lactuca sativa HOM05D007735 ORTHO05D009638 2.1e-15 86.3 116 50.9
Lsat_1_v5_gn_8_114121 Lactuca sativa HOM05D007735 ORTHO05D009638 1.0e-14 84.0 116 48.3
PGSC0003DMG400018690 Solanum tuberosum HOM05D007735 ORTHO05D009638 1.0e-14 84.0 134 43.3
LjContig00247g0020335 Lotus japonicus HOM05D007735 ORTHO05D009638 1.8e-14 83.2 130 45.4
Ca_25020_v3 Cicer arietinum L. HOM05D007735 ORTHO05D009638 3.9e-14 82.0 115 46.1
Medtr5g024910 Medicago truncatula HOM05D007735 ORTHO05D009638 6.7e-14 81.3 120 44.2
Psat4g107200 Pisum sativum HOM05D007735 ORTHO05D009638 1.5e-13 80.1 139 41.0
SGA_v2.0_scaffold2G00933 Striga asiatica HOM05D007735 ORTHO05D009638 1.5e-13 80.1 133 41.4
PGSC0003DMG400015147 Solanum tuberosum HOM05D007735 ORTHO05D009638 3.3e-13 79.0 117 41.0
CsaV3_3G000130 Cucumis sativus L. HOM05D007735 ORTHO05D009638 9.6e-13 77.4 122 42.6
CsaV3_UNG155170 Cucumis sativus L. HOM05D007735 ORTHO05D009638 9.6e-13 77.4 122 42.6
arahy.Tifrunner.gnm1.ann1.Q37N58 Arachis hypogaea HOM05D007735 ORTHO05D009638 2.8e-12 75.9 115 47.0
arahy.Tifrunner.gnm1.ann1.S9U9HD Arachis hypogaea HOM05D007735 ORTHO05D009638 2.8e-12 75.9 115 47.0
Haze_22869 Corylus avellana HOM05D007735 ORTHO05D009638 2.8e-12 75.9 121 47.1
Lsat_1_v5_gn_3_69161 Lactuca sativa HOM05D007735 ORTHO05D009638 2.8e-12 75.9 130 44.6
Nitab4.5_0004507g0030 Nicotiana tabacum HOM05D007735 ORTHO05D009638 3.7e-12 75.5 139 41.7
SGA_v2.0_scaffold108G30951 Striga asiatica HOM05D007735 ORTHO05D009638 2.4e-11 72.8 131 36.6
CiPaw.07G132500 Carya illinoinensis HOM05D007735 ORTHO05D009638 9.0e-11 70.9 136 42.6
MELO3C013706.2 Cucumis melo HOM05D007735 ORTHO05D009638 9.0e-11 70.9 117 43.6
ATR0605G038 Amborella trichopoda HOM05D007735 ORTHO05D009638 1.2e-10 70.5 107 49.5
ClCG10G000110 Citrullus lanatus HOM05D007735 ORTHO05D009638 1.2e-10 70.5 116 44.8
Atru.chr3.61 Acer truncatum HOM05D007735 ORTHO05D009638 5.9e-10 68.2 58 60.3
Nitab4.5_0000235g0170 Nicotiana tabacum HOM05D007735 ORTHO05D009638 2.9e-09 65.9 90 45.6
Nitab4.5_0000304g0050 Nicotiana tabacum HOM05D007735 ORTHO05D009638 4.2e-08 62.0 82 47.6
Migut.H02270 Erythranthe guttata HOM05D007735 ORTHO05D009638 2.1e-07 59.7 119 35.3
Migut.H02268 Erythranthe guttata HOM05D007735 ORTHO05D009638 2.7e-07 59.3 119 35.3
HPP92_018900 Vanilla planifolia HOM05D026889 ORTHO05D009638 2.3e-06 56.2 111 40.5
Rhsim06G0002400 Rhododendron simsii HOM05D001957 ORTHO05D009638 3.0e-06 55.8 139 35.3
HPP92_018844 Vanilla planifolia HOM05D026889 ORTHO05D009638 5.1e-06 55.1 111 40.5


User provided reference genes

Program Settings