Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p052079 Quercus lobata HOM05D003374 ORTHO05D009470 2.2e-88 328.9 166 100.0
Cfa007029 Carpinus fangiana HOM05D003374 ORTHO05D009470 4.4e-65 251.5 171 77.2
Haze_03703 Corylus avellana HOM05D003374 ORTHO05D009415 2.2e-64 249.2 171 76.6
CiPaw.08G125800 Carya illinoinensis HOM05D003374 ORTHO05D009470 2.1e-62 242.7 172 75.6
TWI73G0454 Tripterygium wilfordii HOM05D003374 ORTHO05D009470 2.9e-56 222.2 167 65.9
Thecc.01G011500 Theobroma cacao HOM05D003374 ORTHO05D009470 8.4e-56 220.7 170 70.6
Manes.02G110400 Manihot esculenta HOM05D003374 ORTHO05D009470 1.9e-55 219.5 167 68.9
Gohir.A02G174300 Gossypium hirsutum HOM05D003374 ORTHO05D009470 6.0e-54 214.5 167 69.5
Atru.chr3.907 Acer truncatum HOM05D003374 ORTHO05D009470 2.3e-53 212.6 160 70.6
Ciclev10026638m.g Citrus clementina HOM05D003374 ORTHO05D009470 8.7e-53 210.7 169 66.9
Duzib145G0002 Durio zibethinus HOM05D003374 ORTHO05D009470 8.7e-53 210.7 167 67.7
Gohir.D03G005500 Gossypium hirsutum HOM05D003374 ORTHO05D009470 6.2e-51 204.5 142 73.9
Gorai.003G005900 Gossypium raimondii HOM05D003374 ORTHO05D009470 6.2e-51 204.5 142 73.9
Prupe.7G175000 Prunus persica HOM05D003374 ORTHO05D009470 1.1e-50 203.8 171 63.7
Potri.005G107800 Populus trichocarpa HOM05D003374 ORTHO05D009470 1.8e-50 203.0 169 66.3
MD15G1237400 Malus domestica HOM05D003374 ORTHO05D009470 5.3e-50 201.4 147 72.1
Cpa.g.sc6.313 Carica papaya HOM05D003374 ORTHO05D009470 2.6e-49 199.1 174 62.6
RcHm_v2.0_Chr2g0098351 Rosa chinensis HOM05D003374 ORTHO05D009470 3.8e-48 195.3 138 68.8
Sabra05G0088300 Salix brachista HOM05D003374 ORTHO05D009470 1.1e-47 193.7 144 70.8
FAN23G1041 Fragaria x ananassa HOM05D003374 ORTHO05D009470 2.4e-47 192.6 138 68.8
FvH4_1g11080 Fragaria vesca HOM05D003374 ORTHO05D009470 9.3e-47 190.7 138 69.6
FAN28G2426 Fragaria x ananassa HOM05D003374 ORTHO05D009470 9.3e-47 190.7 138 68.1
FAN26G1101 Fragaria x ananassa HOM05D003374 ORTHO05D009470 6.0e-46 188.0 138 66.7
Dinv08548 Davidia involucrata HOM05D003374 ORTHO05D009470 1.3e-45 186.8 168 65.5
Rhsim10G0205800 Rhododendron simsii HOM05D003374 ORTHO05D009470 1.7e-45 186.4 178 61.2
vmacro20496 Vaccinium macrocarpon HOM05D003374 ORTHO05D009470 3.0e-45 185.7 174 60.9
CANSAT01G1253 Cannabis sativa HOM05D003374 ORTHO05D009470 1.1e-44 183.7 174 64.9
Phvul.002G104800 Phaseolus vulgaris HOM05D003374 ORTHO05D009470 2.8e-43 179.1 173 57.2
TAR625G1139 Trochodendron aralioides HOM05D003374 ORTHO05D009470 6.2e-43 177.9 170 61.2
FAN19G0939 Fragaria x ananassa HOM05D003374 ORTHO05D009470 8.1e-43 177.6 151 62.9
PGR102G2171 Punica granatum HOM05D003374 ORTHO05D009470 8.1e-43 177.6 169 56.2
CSS0026426 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 1.4e-42 176.8 176 59.7
Eucgr.I02305 Eucalyptus grandis HOM05D003374 ORTHO05D009470 3.1e-42 175.6 149 66.4
Hma1.2p1_0315F.1_g122600 Hydrangea macrophylla HOM05D003374 ORTHO05D009470 3.1e-42 175.6 166 61.4
Ca_24942_v3 Cicer arietinum L. HOM05D003374 ORTHO05D009470 5.3e-42 174.9 179 57.0
Glyma.11G080800 Glycine max HOM05D003374 ORTHO05D009470 1.2e-41 173.7 164 57.9
Medtr5g022970 Medicago truncatula HOM05D003374 ORTHO05D009470 2.6e-41 172.6 172 56.4
Lalb_Chr09g0321441 Lupinus albus HOM05D003374 ORTHO05D009470 5.8e-41 171.4 174 56.3
Lj2g0014457 Lotus japonicus HOM05D003374 ORTHO05D009470 2.2e-40 169.5 140 63.6
Duzib147G0965 Durio zibethinus HOM05D003374 ORTHO05D009470 6.4e-40 167.9 142 66.2
Glyma.01G162500 Glycine max HOM05D003374 ORTHO05D009470 3.2e-39 165.6 161 57.8
Cc07_g11310 Coffea canephora HOM05D003374 ORTHO05D009470 5.4e-39 164.9 158 60.1
Cc08_g04880 Coffea canephora HOM05D003374 ORTHO05D009470 5.4e-39 164.9 158 60.1
VMungo1215G1047 Vigna mungo HOM05D003374 ORTHO05D009470 7.9e-38 161.0 172 58.1
Lalb_Chr05g0212181 Lupinus albus HOM05D003374 ORTHO05D009470 1.8e-37 159.8 177 54.2
MBI09_g46000_MAGBIO Magnolia biondii HOM05D003374 ORTHO05D009470 1.6e-35 153.3 161 57.1
Carub.0003s3182 Capsella rubella HOM05D003374 ORTHO05D009470 2.1e-35 152.9 165 53.9
Aa31LG8G14990 Aethionema arabicum HOM05D003374 ORTHO05D009470 2.8e-35 152.5 153 56.2
BcaB03g16544 Brassica carinata HOM05D003374 ORTHO05D009470 3.7e-35 152.1 165 55.2
Thhalv10022897m.g Eutrema salsugineum HOM05D003374 ORTHO05D009470 3.7e-35 152.1 155 54.2
Sp3g31120 Schrenkiella parvula HOM05D003374 ORTHO05D009470 3.7e-35 152.1 168 53.6
AL3G50710 Arabidopsis lyrata HOM05D003374 ORTHO05D009470 1.1e-34 150.6 154 56.5
C07p05580 Brassica napus HOM05D003374 ORTHO05D009470 1.4e-34 150.2 154 57.1
Nitab4.5_0002105g0080 Nicotiana tabacum HOM05D003374 ORTHO05D009470 1.4e-34 150.2 176 55.1
PSO675G4674 Papaver somniferum HOM05D003374 ORTHO05D009470 1.8e-34 149.8 175 54.3
THA.LOC104819731 Tarenaya hassleriana HOM05D003374 ORTHO05D009470 1.8e-34 149.8 149 55.7
PSO541G4788 Papaver somniferum HOM05D003374 ORTHO05D009470 6.9e-34 147.9 138 62.3
THA.LOC104804280 Tarenaya hassleriana HOM05D003374 ORTHO05D009470 6.9e-34 147.9 181 50.8
CARHR108000 Cardamine hirsuta HOM05D003374 ORTHO05D009470 9.0e-34 147.5 144 57.6
BcaB08g34755 Brassica carinata HOM05D003374 ORTHO05D009470 2.0e-33 146.4 154 55.8
BcaC06g36303 Brassica carinata HOM05D003374 ORTHO05D009470 3.4e-33 145.6 154 55.8
AT2G17710 Arabidopsis thaliana HOM05D003374 ORTHO05D009470 4.5e-33 145.2 152 55.3
BolC7t40958H Brassica oleracea HOM05D003374 ORTHO05D009415 4.5e-33 145.2 156 56.4
BraA07t28128Z Brassica rapa HOM05D003374 ORTHO05D009470 5.8e-33 144.8 156 55.8
Nitab4.5_0006892g0010 Nicotiana tabacum HOM05D003374 ORTHO05D009470 5.8e-33 144.8 176 54.0
Potri.005G107900 Populus trichocarpa HOM05D003374 ORTHO05D009470 1.7e-32 143.3 115 66.1
BcaC01g02894 Brassica carinata HOM05D003374 ORTHO05D009470 3.8e-32 142.1 156 54.5
C03p58640 Brassica napus HOM05D003374 ORTHO05D009470 3.8e-32 142.1 156 54.5
BolC3t18125H Brassica oleracea HOM05D003374 ORTHO05D009470 3.8e-32 142.1 156 54.5
CAN.G890.28 Capsicum annuum HOM05D003374 ORTHO05D009470 4.9e-32 141.7 169 53.3
Sopen02g028160 Solanum pennellii HOM05D003374 ORTHO05D009470 4.9e-32 141.7 171 54.4
PGSC0003DMG400003663 Solanum tuberosum HOM05D003374 ORTHO05D009470 6.5e-32 141.4 171 53.2
A06p33690 Brassica napus HOM05D003374 ORTHO05D009470 1.9e-31 139.8 156 53.8
BraA06t26303Z Brassica rapa HOM05D003374 ORTHO05D009470 1.9e-31 139.8 156 53.8
MSTRG.22233 Avicennia marina HOM05D003374 ORTHO05D009470 4.6e-30 135.2 135 51.9
Peaxi162Scf00328g00118 Petunia axillaris HOM05D003374 ORTHO05D009470 1.8e-29 133.3 130 60.0
MSTRG.24362 Avicennia marina HOM05D003374 ORTHO05D009470 3.0e-29 132.5 123 53.7
CDE05G2149 Ceratophyllum demersum HOM05D003374 ORTHO05D009470 3.9e-29 132.1 128 52.3
CDE05G3297 Ceratophyllum demersum HOM05D003374 ORTHO05D009470 8.7e-29 131.0 139 51.1
GSVIVG01005193001 Vitis vinifera HOM05D003374 ORTHO05D009470 1.5e-28 130.2 112 62.5
Oeu022073.1 Olea europaea HOM05D003374 ORTHO05D009470 5.7e-28 128.3 146 52.7
Actinidia22937 Actinidia chinensis HOM05D003374 ORTHO05D009470 9.6e-28 127.5 148 56.1
Aqoxy6G01986 Aquilegia oxysepala HOM05D003374 ORTHO05D009470 1.3e-27 127.1 136 52.9
EL10Ac9g21336 Beta vulgaris HOM05D003374 ORTHO05D009470 5.8e-25 118.2 142 52.1
Migut.N02761 Erythranthe guttata HOM05D003374 ORTHO05D009470 5.0e-24 115.2 113 51.3
COL.COLO4_22495 Corchorus olitorius HOM05D003374 ORTHO05D009470 6.5e-24 114.8 91 68.1
SalBow6G5967 Salvia bowleyana HOM05D003374 ORTHO05D009470 8.4e-24 114.4 106 56.6
AUR62012999 Chenopodium quinoa HOM05D003374 ORTHO05D009470 1.9e-23 113.2 124 52.4
SalBow8G5385 Salvia bowleyana HOM05D003374 ORTHO05D009470 2.5e-23 112.8 106 55.7
Sc18g0006270 Simmondsia chinensis HOM05D003374 ORTHO05D009470 1.3e-21 107.1 105 61.9
arahy.Tifrunner.gnm1.ann1.HG61QK Arachis hypogaea HOM05D003374 ORTHO05D009470 7.4e-20 101.3 96 58.3
arahy.Tifrunner.gnm1.ann1.YP763J Arachis hypogaea HOM05D003374 ORTHO05D009470 7.4e-20 101.3 96 58.3
Actinidia17405 Actinidia chinensis HOM05D000373 ORTHO05D001763 1.6e-19 100.1 125 53.6
TPR.G20269 Trifolium pratense HOM05D003374 ORTHO05D009470 1.8e-18 96.7 84 56.0
unitig_578.g16135 Utricularia gibba HOM05D003374 ORTHO05D009470 2.2e-16 89.7 110 45.5
Hund00012 Selenicereus undatus HOM05D003374 ORTHO05D009470 1.1e-15 87.4 108 50.9
TPR.G25136 Trifolium pratense HOM05D000373 ORTHO05D001763 9.4e-15 84.3 142 45.1
Duzib145G0007 Durio zibethinus HOM05D003374 ORTHO05D009470 4.6e-14 82.0 63 68.3
A07p03300 Brassica napus HOM05D003374 ORTHO05D009415 6.1e-14 81.6 91 52.7
ATR0346G001 Amborella trichopoda HOM05D003374 ORTHO05D009470 2.2e-11 73.2 85 51.8
Ah.01g008140 Amaranthus hybridus HOM05D003374 ORTHO05D009470 2.4e-10 69.7 88 46.6
Solyc02g083380.3 Solanum lycopersicum HOM05D003374 ORTHO05D009470 3.1e-10 69.3 75 52.0
AUR62010008 Chenopodium quinoa HOM05D003374 ORTHO05D010386 5.0e-08 62.0 86 45.3
Os04g0560700 Oryza sativa ssp. japonica HOM05D003374 ORTHO05D009470 1.2e-06 57.4 87 39.1
Mapoly0087s0045 Marchantia polymorpha HOM05D004108 ORTHO05D004849 2.1e-06 56.6 107 33.6


User provided reference genes

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