Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 4.0e-122 441.4 222 100.0
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 4.1e-50 202.2 109 93.6
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 1.2e-49 200.7 109 94.5
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 1.2e-49 200.7 109 94.5
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 2.0e-49 199.9 109 92.7
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 4.6e-49 198.7 109 90.8
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 4.6e-49 198.7 109 91.7
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 4.6e-49 198.7 109 90.8
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 1.0e-48 197.6 109 91.7
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 1.0e-48 197.6 109 91.7
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 1.0e-48 197.6 109 91.7
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 1.3e-48 197.2 109 90.8
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 1.7e-48 196.8 109 89.9
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 2.3e-48 196.4 109 89.9
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 3.0e-48 196.1 112 90.2
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 3.9e-48 195.7 109 90.8
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 5.0e-48 195.3 109 88.1
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 5.0e-48 195.3 110 90.9
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 6.6e-48 194.9 110 90.9
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 6.6e-48 194.9 111 89.2
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 8.6e-48 194.5 109 89.0
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 8.6e-48 194.5 109 89.9
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 1.1e-47 194.1 109 89.0
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 1.1e-47 194.1 109 88.1
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.5e-47 193.7 110 90.0
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 1.5e-47 193.7 109 89.0
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 1.9e-47 193.4 109 89.0
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 1.9e-47 193.4 109 89.0
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.9e-47 193.4 109 89.9
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 2.5e-47 193.0 109 87.2
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.5e-47 193.0 109 89.0
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 3.3e-47 192.6 110 89.1
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 5.6e-47 191.8 109 89.0
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 5.6e-47 191.8 109 89.0
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 7.3e-47 191.4 109 89.0
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 9.5e-47 191.0 109 85.3
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 9.5e-47 191.0 109 88.1
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 9.5e-47 191.0 110 89.1
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 9.5e-47 191.0 110 88.2
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 1.2e-46 190.7 109 88.1
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.2e-46 190.7 109 88.1
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 1.2e-46 190.7 111 84.7
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 1.6e-46 190.3 111 84.7
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 1.6e-46 190.3 109 86.2
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 1.6e-46 190.3 109 85.3
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 1.6e-46 190.3 109 86.2
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 2.1e-46 189.9 109 84.4
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.1e-46 189.9 108 88.0
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 2.1e-46 189.9 109 84.4
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 2.1e-46 189.9 109 86.2
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 2.8e-46 189.5 109 87.2
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 2.8e-46 189.5 109 87.2
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 2.8e-46 189.5 111 85.6
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 2.8e-46 189.5 111 83.8
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 3.6e-46 189.1 111 84.7
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 3.6e-46 189.1 109 83.5
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 3.6e-46 189.1 109 83.5
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 3.6e-46 189.1 108 86.1
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 3.6e-46 189.1 109 84.4
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 3.6e-46 189.1 109 86.2
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 6.2e-46 188.3 109 87.2
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 6.2e-46 188.3 109 87.2
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 1.4e-45 187.2 109 83.5
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 1.4e-45 187.2 109 83.5
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.8e-45 186.8 118 84.7
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 4.0e-45 185.7 109 85.3
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 4.0e-45 185.7 111 82.9
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 4.0e-45 185.7 111 82.9
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 6.8e-45 184.9 109 84.4
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 8.9e-45 184.5 109 84.4
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 1.5e-44 183.7 111 80.2
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 2.0e-44 183.3 111 80.2
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 2.6e-44 183.0 109 82.6
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 2.6e-44 183.0 109 83.5
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 7.5e-44 181.4 109 80.7
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.3e-43 180.6 112 86.6
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 4.9e-43 178.7 107 80.4
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 6.4e-43 178.3 109 80.7
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 8.3e-43 177.9 109 80.7
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.1e-42 177.6 109 84.4
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 1.9e-42 176.8 109 80.7
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 1.9e-42 176.8 110 81.8
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 1.9e-42 176.8 109 79.8
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 1.6e-41 173.7 109 80.7
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 2.0e-41 173.3 110 79.1
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 6.0e-41 171.8 109 77.1
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 6.0e-41 171.8 109 77.1
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 1.3e-40 170.6 121 72.7
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 3.9e-40 169.1 110 78.2
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 1.1e-39 167.5 109 72.5
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 1.9e-39 166.8 109 77.1
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 1.9e-39 166.8 109 77.1
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 4.3e-39 165.6 111 72.1
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 7.3e-39 164.9 109 80.7
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 2.1e-38 163.3 109 74.3
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 3.6e-38 162.5 94 84.0
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 4.7e-38 162.2 91 87.9
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.1e-37 161.0 92 84.8
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 1.4e-37 160.6 109 67.0
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 5.4e-34 148.7 109 65.1
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 2.7e-33 146.4 126 65.1
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 2.8e-30 136.3 71 93.0
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 1.4e-29 134.0 109 70.6
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 9.6e-23 111.3 67 83.6
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 2.1e-22 110.2 67 79.1
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 2.1e-22 110.2 67 79.1
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 1.9e-18 97.1 110 42.7
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 9.3e-18 94.7 57 77.2
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 3.3e-15 86.3 53 79.2
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 4.3e-15 85.9 58 69.0
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 6.2e-14 82.0 45 88.9
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 8.1e-14 81.6 48 83.3
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 3.1e-13 79.7 59 69.5
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 2.0e-12 77.0 45 84.4
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 2.6e-12 76.6 45 82.2


User provided reference genes

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